CN185593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.460e-58 Identity = 109/196 (55.61%), Postives = 147/196 (75.00%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593 A+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E +P I+FIDEIDAIGTKR+DS G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P E+ + RI QIH+ +MT+ DV ++L + DD +GA +KA+C EAG++ALR +V +EDF + V KK+ Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQ 431
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 9.935e-58 Identity = 107/186 (57.53%), Postives = 142/186 (76.34%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 563 A+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A+E P I+FIDEIDAIGTKR+DS G+RE+QRTMLELLNQLDGF S +KVI ATNR + LDPAL+R GR+DRKIE P P E+ + RI QIH+ +MT+ DV +EL + DD +GA +KA+C EAG++ALR +V +EDF + Sbjct: 236 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 421
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.891e-57 Identity = 107/196 (54.59%), Postives = 145/196 (73.98%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593 A+A A QT+ATFL++ G +L+Q ++GDG K+VR+ F++A+E +P I+FIDEIDA+GTKR+DS G+RE+QRTMLELLNQLDGF S +KV+ ATNR + LDPAL+R GR+DRKIE P P E+ + RI QIH+ +MT+ +VN EE + D+ +GA +KA+C EAG+LALR V EDF + V +KK Sbjct: 239 AKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVLYRKK 434
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 6.440e-57 Identity = 107/197 (54.31%), Postives = 144/197 (73.10%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKA 596 A+A A QT+ATFL++ G +L+Q ++GDG KLVR+ F++A E +P I+FIDEIDA+GTKR+DS+ G+RE+QRTMLELLNQLDGF + +KVI ATNR + LDPAL+R GR+DRKIE P P + + +I +IH+ KM + DVN EE S DD +GA +KA+C E+G+LALR V H DF + +V +K A Sbjct: 235 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSGGEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFKKAKEKVLYRKTA 431
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.874e-56 Identity = 107/199 (53.77%), Postives = 146/199 (73.37%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 602 A+A A +TNATF+++ G +LV+ FIG+GA LV+D F+LAKEK+P IIFIDEIDAI KR D+ GDREVQRT+++LL ++DGF + +K+I ATNR DILDPA++R GR DR IE+P P E+ R IL+IH+RKM + DVN EE+A+ T+ GA+LKA+C EAGM A+R V +DF + + ++ KKK + Sbjct: 221 AKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVKV 419
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 5.452e-56 Identity = 108/196 (55.10%), Postives = 145/196 (73.98%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593 A+A A +ATF++LA P+LVQ FIG+GA+LVR+ F+LA+EK+P IIFIDEIDAIG +R SGDREVQRT+ +LL ++DGF D IKVIAATNR DILDPAL+R GR DR I++P P EE R I +IH+R M + DV+ ++LA+ T+ +GA +KA+C EAGM+A+R D V +DF + + +V KK+ Sbjct: 230 AKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVMGKKE 425
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 9.299e-56 Identity = 108/194 (55.67%), Postives = 145/194 (74.74%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 587 A+A A QT ATF+++ G + VQ +IG+GA+LVR+ FQLAKEK+P IIFIDE+DAI +R +S+ SGDREVQRTM++LL +LDGF +KVI ATNR DILDPA++R GR DR IE+P P+ E R +I +IH+RKM + DV+F+ELAR T+ +GA +KA+C EAGM A+R + +V DF + I +V K Sbjct: 192 AKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKVLKK 385
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.215e-55 Identity = 104/199 (52.26%), Postives = 149/199 (74.87%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 602 A+A A +T ATF+++ G +LVQ +IG+GA++VR+ F+LAKEKSP IIFIDEID+IG KR DS SGDREVQRT+++LL ++DGF ++++AATNR DILDPAL+R GR DR I++P P+ EAR +IL+IH+RKM + DV+ ++A TD+ +GA L A+ +EAGM A+R + V+ DFN + +V ++ S+ Sbjct: 210 AKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEIDSIGAKRLDSITSGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPDILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAIRNNRDVVDSSDFNAAVAKVMGERNRSM 408
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR2_HALSA (Proteasome-activating nucleotidase 2 OS=Halobacterium salinarium GN=pan2 PE=3 SV=2) HSP 1 Score: 215.698 bits (548), Expect = 2.072e-55 Identity = 104/184 (56.52%), Postives = 140/184 (76.09%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 557 A+A A+QT+A+F+K+AG +LV FIG+GAKLVRD FQ+A++ P ++FIDEIDAI +KR DS+ SGD EVQRTM++LL+++DGF I++IAATNR D+LD A++R GR DR IE+PHP+ R +I +IH+R M V V+F ELA T D +GA +KA+C EAGM A+R D TEV +DF Sbjct: 200 AKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAVVFIDEIDAIASKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDRAILRPGRFDRLIEVPHPNVGGREKIFRIHTRAMNVADSVDFGELAADTGDLSGADVKAICTEAGMFAIRDDRTEVRMQDF 383
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 3.534e-55 Identity = 106/198 (53.54%), Postives = 145/198 (73.23%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKAS 599 A+A A +TNA+F+++ G +LV+ FIG+GAKLVRD F+LAKEKSPCIIFIDEIDA+ +KR +S GDREVQRT+++LL ++DGF S +K+IAATNR DILDPA++R GR DR IE+ P E+ R I +IH+ KM + V+ E+A+ ++ GA +KAVC EAGM A+R V +DF E +++V KK+ S Sbjct: 199 AKAVARETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEIAAPDEDGRLEIFKIHTDKMNI-KSVDLREIAKMAENMVGADIKAVCTEAGMFAIREGREYVTTKDFKEALLKVTGKKEKS 395 The following BLAST results are available for this feature:
BLAST of CN185593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 377
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185593 ID=CN185593; Name=CN185593; organism=Citrus sinensis; type=EST; length=736bpback to top |