CN185593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: KTNA1_DANRE (Katanin p60 ATPase-containing subunit A1 OS=Danio rerio GN=katna1 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.498e-21 Identity = 62/178 (34.83%), Postives = 106/178 (59.55%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV-SGDREVQRTMLELLNQLDGFSSDDRIK---VIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 527 A+A A + TF ++ L + G+ KLVR F++A+ +P IFIDEID+I ++R SE R V+ +L ++ + G S +D K V+AATN +D AL R RL+++I +P PS + R +L+I+ +++ + DVN +++A + ++GA + VC +A ++A+RR Sbjct: 254 AKAVATECRTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGRVDLLKINLKELDLANDVNMDKIAEQMEGYSGADITNVCRDASLMAMRR 429
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: SPAST_DROYA (Spastin OS=Drosophila yakuba GN=spas PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.957e-21 Identity = 69/216 (31.94%), Postives = 110/216 (50.93%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVN-FEELARSTDDFNGAQLKAVCVEAGMLALRRDATE------------VNHEDFNEGIIQV-QAKKKASLNYY 611 ARA A + +ATFL ++ L ++GDG KLVR F +A+ P IIFIDE+D++ ++R SE R ++ L + L G DRI V+AATNR LD A +R R +++ + P E+ R +L +K D LA+ TD ++G+ L A+ +A + +R E + +DF+ + ++ ++ SLN Y Sbjct: 533 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLNSY 746
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: SPAST_DROSE (Spastin OS=Drosophila sechellia GN=spas PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.957e-21 Identity = 69/216 (31.94%), Postives = 110/216 (50.93%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVN-FEELARSTDDFNGAQLKAVCVEAGMLALRRDATE------------VNHEDFNEGIIQV-QAKKKASLNYY 611 ARA A + +ATFL ++ L ++GDG KLVR F +A+ P IIFIDE+D++ ++R SE R ++ L + L G DRI V+AATNR LD A +R R +++ + P E+ R +L +K D LA+ TD ++G+ L A+ +A + +R E + +DF+ + ++ ++ SLN Y Sbjct: 533 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLNSY 746
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: SPAST_DROME (Spastin OS=Drosophila melanogaster GN=spas PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.957e-21 Identity = 69/216 (31.94%), Postives = 110/216 (50.93%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVN-FEELARSTDDFNGAQLKAVCVEAGMLALRRDATE------------VNHEDFNEGIIQV-QAKKKASLNYY 611 ARA A + +ATFL ++ L ++GDG KLVR F +A+ P IIFIDE+D++ ++R SE R ++ L + L G DRI V+AATNR LD A +R R +++ + P E+ R +L +K D LA+ TD ++G+ L A+ +A + +R E + +DF+ + ++ ++ SLN Y Sbjct: 533 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLNSY 746
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: SPAST_DROER (Spastin OS=Drosophila erecta GN=spas PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.957e-21 Identity = 69/216 (31.94%), Postives = 110/216 (50.93%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVN-FEELARSTDDFNGAQLKAVCVEAGMLALRRDATE------------VNHEDFNEGIIQV-QAKKKASLNYY 611 ARA A + +ATFL ++ L ++GDG KLVR F +A+ P IIFIDE+D++ ++R SE R ++ L + L G DRI V+AATNR LD A +R R +++ + P E+ R +L +K D LA+ TD ++G+ L A+ +A + +R E + +DF+ + ++ ++ SLN Y Sbjct: 533 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLNSY 746
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FIGL1_CAEEL (Fidgetin-like protein 1 OS=Caenorhabditis elegans GN=figl-1 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.957e-21 Identity = 65/178 (36.52%), Postives = 102/178 (57.30%), Query Frame = 3 Query: 9 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS--DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQ---IHSR-KMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 524 R A+Q ATF ++ L ++G+G KLVR F +A+ K P +IFIDEID++ + R +SE R ++ E L QLDG ++ D+R+ V+ ATNR LD A R R +++ + P E+R +I+Q + +R +T H N E + TD ++GA ++ +C EA M +R Sbjct: 367 RCVASQCKATFFNISASSLTSKWVGEGEKLVRALFSVARLKLPSVIFIDEIDSLLSSRSESEHESSRRIK---TEFLVQLDGVNTAPDERLLVLGATNRPQELDEAARR--RFQKRLYIALPEPESRTQIVQNLLVGTRHDITNH---NLERIRELTDGYSGADMRQLCTEAAMGPIR 536
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: SPAST_RAT (Spastin OS=Rattus norvegicus GN=Spast PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21 Identity = 63/176 (35.80%), Postives = 102/176 (57.95%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS--DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQ-IHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 524 A+A AA++NATF ++ L ++G+G KLVR F +A+E P IIFIDE+D++ +R + E R R E L + DG S DDR+ V+ ATNR LD A++R R +++ + P+EE R +L+ + ++ + +LAR TD ++G+ L A+ +A + +R Sbjct: 357 AKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASR---RLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIR 527
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: SPAST_MOUSE (Spastin OS=Mus musculus GN=Spast PE=2 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21 Identity = 63/176 (35.80%), Postives = 102/176 (57.95%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS--DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQ-IHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 524 A+A AA++NATF ++ L ++G+G KLVR F +A+E P IIFIDE+D++ +R + E R R E L + DG S DDR+ V+ ATNR LD A++R R +++ + P+EE R +L+ + ++ + +LAR TD ++G+ L A+ +A + +R Sbjct: 390 AKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASR---RLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIR 560
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: SPAST_HUMAN (Spastin OS=Homo sapiens GN=SPAST PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21 Identity = 63/176 (35.80%), Postives = 102/176 (57.95%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS--DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQ-IHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 524 A+A AA++NATF ++ L ++G+G KLVR F +A+E P IIFIDE+D++ +R + E R R E L + DG S DDR+ V+ ATNR LD A++R R +++ + P+EE R +L+ + ++ + +LAR TD ++G+ L A+ +A + +R Sbjct: 392 AKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASR---RLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIR 562
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: SPAST_DROAN (Spastin OS=Drosophila ananassae GN=spas PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21 Identity = 61/174 (35.06%), Postives = 96/174 (55.17%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVN-FEELARSTDDFNGAQLKAVCVEAGMLALR 524 ARA A + +ATFL ++ L ++GDG KLVR F +A+ P IIFIDE+D++ ++R +E R ++ L + L G DRI V+AATNR LD A +R R +++ + P E+ R +L +K D LA++TD ++G+ L A+ +A + +R Sbjct: 545 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLSRLLQKQGSPLDTEALRRLAKTTDGYSGSDLTALAKDAALEPIR 716 The following BLAST results are available for this feature:
BLAST of CN185593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 377
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185593 ID=CN185593; Name=CN185593; organism=Citrus sinensis; type=EST; length=736bpback to top |