CN185593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: KTNA1_MACFA (Katanin p60 ATPase-containing subunit A1 OS=Macaca fascicularis GN=KATNA1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21 Identity = 62/179 (34.64%), Postives = 104/179 (58.10%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV-SGDREVQRTMLELLNQLDGFSSDD----RIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 527 A+A A + TF ++ L + G+ KLVR F++A+ SP IFIDEID+I ++R SE R V+ +L ++ + G S +D + V+AATN +D AL R RL+++I +P PS + R +L+I R++ + DV+ +A + + ++GA + VC +A ++A+RR Sbjct: 259 AKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRR 435
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: KTNA1_HUMAN (Katanin p60 ATPase-containing subunit A1 OS=Homo sapiens GN=KATNA1 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21 Identity = 62/179 (34.64%), Postives = 104/179 (58.10%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV-SGDREVQRTMLELLNQLDGFSSDD----RIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 527 A+A A + TF ++ L + G+ KLVR F++A+ SP IFIDEID+I ++R SE R V+ +L ++ + G S +D + V+AATN +D AL R RL+++I +P PS + R +L+I R++ + DV+ +A + + ++GA + VC +A ++A+RR Sbjct: 259 AKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDASLMAMRR 435
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FIGL1_RAT (Fidgetin-like protein 1 OS=Rattus norvegicus GN=Fignl1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.556e-21 Identity = 62/175 (35.43%), Postives = 101/175 (57.71%), Query Frame = 3 Query: 9 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG--FSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARI-LQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 524 + A+Q+ ATF ++ L ++G+G K+VR F +A+ + P +IFIDEID++ ++R D E R ++ E L QLDG SS+DRI V+ ATNR +D A R RL +++ +P P AR +I + + S++ D E + + +D F+GA + +C EA + +R Sbjct: 455 KCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHESSRRIK---TEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVVNLMSKEQCCLTDEETELVVQQSDGFSGADMTQLCREASLGPIR 624
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: VPS4_SCHPO (Suppressor protein of bem1/bed5 double mutants OS=Schizosaccharomyces pombe GN=vps4 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21 Identity = 61/185 (32.97%), Postives = 107/185 (57.84%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDR-IKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVH-PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 554 A+A A + +TF ++ LV ++G+ +LVR F++A+E+ P IIFIDEID++ R + E R ++ E L Q++G D+ + V+ ATN LD A+ R R +++I +P P+ ARAR+ +++ K+ +F+ELA+ TD ++G+ + V +A M +RR T + ++ Sbjct: 179 AKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSLCGSRSEGESESSRRIK---TEFLVQMNGVGKDESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMFELNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDAIMEPVRRIHTATHFKE 358
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: VPS4B_MOUSE (Vacuolar protein sorting-associated protein 4B OS=Mus musculus GN=Vps4b PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21 Identity = 63/177 (35.59%), Postives = 101/177 (57.06%), Query Frame = 3 Query: 6 ARACAAQTN-ATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD-DRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIH-SRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 527 A+A A + N +TF ++ LV ++G+ KLV++ FQLA+E P IIFIDEID++ R ++E R ++ E L Q+ G D D I V+ ATN +LD A+ R R +++I +P P ARA + ++H + +F+EL R TD ++GA + + +A M +R+ Sbjct: 184 AKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIK---TEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVRK 355
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: SPAST_PIG (Spastin (Fragment) OS=Sus scrofa GN=SPAST PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21 Identity = 63/176 (35.80%), Postives = 102/176 (57.95%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS--DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQ-IHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 524 A+A AA++NATF ++ L ++G+G KLVR F +A+E P IIFIDE+D++ +R + E R R E L + DG S DDR+ V+ ATNR LD A++R R +++ + P+EE R +L+ + ++ + +LAR TD ++G+ L A+ +A + +R Sbjct: 389 AKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLRERREGEHDASR---RLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARLTDGYSGSDLTALAKDAALGPIR 559
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: SPAST_XENTR (Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.360e-21 Identity = 61/176 (34.66%), Postives = 103/176 (58.52%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS--DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQ-IHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 524 A+A AA++NATF ++ L ++G+G KLVR F +A+E P IIFIDE+D++ +R + E R R E L + DG S DDR+ V+ ATNR LD A++R R +++ + P+EE R +L+ + S++ + +L+R T+ ++G+ + A+ +A + +R Sbjct: 379 AKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERREGEHDASR---RLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLR--RFTKRVYVSLPNEETRLLLLKNLLSKQGNPLNEKELTQLSRLTEGYSGSDITALAKDAALGPIR 549
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: SPAST_XENLA (Spastin OS=Xenopus laevis GN=spast PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.360e-21 Identity = 61/176 (34.66%), Postives = 103/176 (58.52%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS--DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQ-IHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 524 A+A AA++NATF ++ L ++G+G KLVR F +A+E P IIFIDE+D++ +R + E R R E L + DG S DDR+ V+ ATNR LD A++R R +++ + P+EE R +L+ + S++ + +L+R T+ ++G+ + A+ +A + +R Sbjct: 376 AKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERREGEHDASR---RLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLR--RFTKRVYVALPNEETRLVLLKNLLSKQGNPLSEKELTQLSRLTEGYSGSDITALAKDAALGPIR 546
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: SPAST_DANRE (Spastin OS=Danio rerio GN=spast PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.360e-21 Identity = 63/176 (35.80%), Postives = 101/176 (57.39%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS--DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQ-IHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 524 A+A A ++NATF ++ L ++G+G KLVR F +A+E P IIFIDEID++ +R + E R R E L + DG S D+R+ V+ ATNR LD A++R R ++I + P+EE R ++L+ + S+ +LAR TD ++G+ L ++ +A + +R Sbjct: 345 AKAVAMESNATFFNISAATLTSKYVGEGEKLVRALFAVARELQPSIIFIDEIDSLLCERREGEHDASR---RLKTEFLIEFDGVQSGGDERVLVMGATNRPQELDEAVLR--RFAKRIYVALPTEETRLKLLKNLLSKHRNPLSQKELSQLARLTDGYSGSDLTSLAKDAALGPIR 515
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: NSF_ARATH (Vesicle-fusing ATPase OS=Arabidopsis thaliana GN=NSF PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 4.360e-21 Identity = 70/207 (33.82%), Postives = 106/207 (51.21%), Query Frame = 3 Query: 54 GPQLVQMFIGDGAKLVRDAFQLAKEKSPC--------IIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMT----VHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDAT-------------EVNHEDFNEGIIQVQAKKKAS 599 GP+++ F+G+ K VRD F A++ +I DEIDAI R S G + +LL ++DG + + + +I TNR D+LD AL+R GRL+ ++E+ P E R +ILQIH+ KM + D+N +ELA T +++GA+L+ V A AL R + ++ EDF I +VQ AS Sbjct: 284 GPEVLSKFVGETEKNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSR-GSTRDGTGVHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINLQELAARTKNYSGAELEGVVKSATSYALNRQLSMDDLTKPVEEENIKITMEDFLHAIYEVQPAFGAS 489 The following BLAST results are available for this feature:
BLAST of CN185593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 377
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185593 ID=CN185593; Name=CN185593; organism=Citrus sinensis; type=EST; length=736bpback to top |