CN185593

Overview
NameCN185593
Unique NameCN185593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.534e-55
Identity = 106/196 (54.08%), Postives = 146/196 (74.49%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593
            A+A A +TNA+F+++ G +LV+ FIG+GAKLVRD F+LAKEKSPCIIFIDEIDA+ +KR +S   GDREVQRT+++LL ++DGF S   +K+IAATNR DILDPA++R GR DR IE+  P E+ R  IL+IH+ KM +  +V+  E+A+  ++  GA LKAVC EAGM A+R +   +  +DF E I ++  KK+
Sbjct:  199 AKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNL-KNVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKKE 393          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.028e-55
Identity = 106/196 (54.08%), Postives = 145/196 (73.98%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593
            A+A A +TNA+F+++ G +LV+ FIG+GAKLVRD F+LAKEKSPCIIFIDEIDA+ +KR +S   GDREVQRT+++LL ++DGF S   +K+IAATNR DILDPA++R GR DR IE+  P E+ R  IL+IH+ KM +   V+  E+A+  ++  GA LKAVC EAGM A+R +   +  +DF E I ++  KK+
Sbjct:  199 AKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAISKITGKKE 393          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.872e-55
Identity = 106/196 (54.08%), Postives = 145/196 (73.98%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593
            A+A A +TNA+F+++ G +LV+ FIG+GAKLVRD F+LAKEKSPCIIFIDEIDA+ +KR +S   GDREVQRT+++LL ++DGF S   +K+IAATNR DILDPA++R GR DR IE+  P E+ R  IL+IH+ KM +   V+  E+A+  ++  GA LKAVC EAGM A+R +   +  +DF E I ++  KK+
Sbjct:  199 AKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAITKITGKKE 393          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.028e-54
Identity = 105/188 (55.85%), Postives = 140/188 (74.47%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI 569
            ARA A QTNA FL++ G +LVQ +IG+GA+LVR+ F LAK+++P IIFIDEIDAIG  R DS  SGDREVQRT+++LL ++DGF +   +K++AATNR DILD AL+R GR DR IE+P P  + R  IL+IH++ M +  DVN  E++R T+  NGA L+A+C+EAGM A+R +   VN EDF + I
Sbjct:  204 ARAVAHQTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQRAPSIIFIDEIDAIGAHRNDSTTSGDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIRMERDAVNSEDFMKAI 391          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.028e-54
Identity = 106/196 (54.08%), Postives = 145/196 (73.98%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593
            A+A A +TNA+F+++ G +LV+ FIG+GAKLVRD F+LAKEKSPCIIFIDEIDA+ +KR +S   GDREVQRT+++LL ++DGF S   +K+IAATNR DILDPA++R GR DR IE+  P E+ R  IL+IH+ KM +   V+  E+A+  ++  GA LKAVC EAGM A+R +   +  +DF E I ++  KK+
Sbjct:  199 AKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNL-KGVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKKE 393          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.754e-54
Identity = 103/194 (53.09%), Postives = 149/194 (76.80%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 587
            A+A A QT+A+F+K+AG +LV+ FIG+G++LVRD F+LA++K P IIFIDEIDA+  KR DS+ SGD EVQRTM++LL+++DGF     I++IAATNR D+LD A++R GR DR IE+P+P+ +AR RIL+IH+ +M V   V+F +LA  T +F+GAQL ++  EAGM A+R D  EV+ +DF++   ++ A+
Sbjct:  203 AKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKRTDSKTSGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSAILRPGRFDRLIEVPNPNPDARERILEIHAGEMNVADSVDFSDLAADTAEFSGAQLASLATEAGMFAIRDDRDEVHRQDFDDAYEKLVAE 396          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.754e-54
Identity = 107/194 (55.15%), Postives = 138/194 (71.13%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 587
            ARA A  T  TF++++G +LVQ FIG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +S   GD EVQRTMLELLNQLDGF +   IKVI ATNR DILDPAL+R GR+DRKIE P P+EEAR  IL+IHSRKM +   +N  ++A      +GA++K VC EAGM ALR     V  EDF   + +V  K
Sbjct:  196 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 389          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PRS8_DROME (26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Pros45 PE=1 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 1.754e-54
Identity = 107/194 (55.15%), Postives = 138/194 (71.13%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 587
            ARA A  T  TF++++G +LVQ FIG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +S   GD EVQRTMLELLNQLDGF +   IKVI ATNR DILDPAL+R GR+DRKIE P P+EEAR  IL+IHSRKM +   +N  ++A      +GA++K VC EAGM ALR     V  EDF   + +V  K
Sbjct:  199 ARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 392          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.991e-54
Identity = 105/196 (53.57%), Postives = 141/196 (71.94%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593
            A+A A +TNATF+K+   + V+ +IG+GA+LVR  F+LAKEKSP IIFIDEIDA+  KR  S  SGDREVQRT+++LL +LDGF S   + ++AATNR DILDPAL+R GR DR IE+P P+E+ R  IL+IH+  M +  +V+ E LAR TD  +GA LKA+C EAGM A+R +  EV   DF + + ++   +K
Sbjct:  202 AKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVDKIMGVEK 397          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.704e-54
Identity = 110/200 (55.00%), Postives = 141/200 (70.50%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN 605
            ARA A  T   F++++G +LVQ +IG+G++LVR+ F +A+E +P IIF+DEID+IG+ R DS    D EVQRTMLELLNQLDGF S + IKVI ATNR DILDPAL+R+GR+DRKIE P P+E AR  IL+IHSRKM +   ++ E +A      +GA++KAVC EAGM ALR     V  EDF   + +V  KK   LN
Sbjct:  247 ARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFIMAREHAPSIIFMDEIDSIGSTRGDSNKGSDSEVQRTMLELLNQLDGFESHNNIKVIMATNRIDILDPALLRTGRIDRKIEFPPPNESARLEILKIHSRKMNLTKGIDLETIASKMVGCSGAEVKAVCTEAGMYALRERRVHVTQEDFEMAVHKV-LKKTGDLN 445          
The following BLAST results are available for this feature:
BLAST of CN185593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
PSMR_METM73.534e-5554.08Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METMP6.028e-5554.08Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM57.872e-5554.08Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METMJ1.028e-5455.85Proteasome-activating nucleotidase OS=Methanoculle... [more]
PSMR_METM61.028e-5454.08Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR1_HALSA1.754e-5453.09Proteasome-activating nucleotidase 1 OS=Halobacter... [more]
PRS8_MANSE1.754e-5455.1526S protease regulatory subunit 8 OS=Manduca sexta... [more]
PRS8_DROME1.754e-5455.1526S protease regulatory subunit 8 OS=Drosophila me... [more]
PSMR_METTH2.991e-5453.57Proteasome-activating nucleotidase OS=Methanobacte... [more]
PRS8_ENCCU8.704e-5455.0026S protease regulatory subunit 8 homolog OS=Encep... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185593 ID=CN185593; Name=CN185593; organism=Citrus sinensis; type=EST; length=736bp
GAGGGGCTCGTGCTTGTGCAGCACAAACAAATGCTACCTTTTTGAAGCTC
GCAGGCCCTCAACTAGTCCAGATGTTCATTGGAGATGGAGCCAAACTAGT
TCGTGATGCCTTTCAACTTGCAAAGGAGAAGTCCCCCTGCATTATTTTCA
TCGACGAAATTGACGCAATTGGTACAAAGCGGTTTGACAGTGAAGTGAGT
GGAGACAGGGAGGTGCAGCGAACTATGTTAGAGTTGCTCAATCAGCTCGA
TGGATTTAGCAGCGATGATCGGATTAAGGTCATAGCAGCAACAAATCGTG
CTGATATCCTGGACCCTGCTCTTATGCGATCTGGCCGTTTGGATCGCAAG
ATCGAGTTACCACATCCGAGTGAGGAAGCTAGAGCTCGCATTTTGCAAAT
CCATTCGAGGAAGATGACTGTTCACCCGGATGTCAACTTCGAAGAACTTG
CTCGATCCACTGACGATTTCAATGGGGCACAACTAAAAGCTGTTTGTGTT
GAAGCAGGGATGCTTGCTCTTCGCCGTGATGCGACTGAGGTCAACCATGA
GGATTTCAATGAAGGTATCATTCAGGTGCAGGCTAAGAAAAAGGCTAGCT
TAAACTACTATGCATAGACACATCCAAAGGCGAAGTTTTAGCCTCTACTT
CAATTGGTAATTAATATATTTTGGGTTGAATATTAAAAAATGGGTATTAA
ACATTGTCTTTGTACTGTACATAATATGTTATAATA
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