CN185593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: VPS4B_HUMAN (Vacuolar protein sorting-associated protein 4B OS=Homo sapiens GN=VPS4B PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.694e-21 Identity = 63/177 (35.59%), Postives = 100/177 (56.50%), Query Frame = 3 Query: 6 ARACAAQTN-ATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD-DRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIH-SRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 527 A+A A + N +TF ++ LV ++G+ KLV++ FQLA+E P IIFIDEID++ R ++E R ++ E L Q+ G D D I V+ ATN +LD A+ R R +++I +P P ARA + ++H + +F EL R TD ++GA + + +A M +R+ Sbjct: 184 AKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIK---TEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRK 355
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: SPAST_BOVIN (Spastin OS=Bos taurus GN=SPAST PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.694e-21 Identity = 62/176 (35.23%), Postives = 102/176 (57.95%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS--DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQ-IHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 524 A+A AA++NATF ++ L ++G+G KLVR F +A+E P IIFIDE+D++ +R + E R R E L + DG S DDR+ V+ ATNR LD A++R R +++ + P+EE R +L+ + ++ + +LAR T+ ++G+ L A+ +A + +R Sbjct: 390 AKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASR---RLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLR--RFTKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTNGYSGSDLTALAKDAALGPIR 560
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: KTNA1_CHICK (Katanin p60 ATPase-containing subunit A1 OS=Gallus gallus GN=KATNA1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.694e-21 Identity = 64/181 (35.36%), Postives = 104/181 (57.46%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGF----SSDD---RIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 527 A+A A + TF ++ L + G+ KLVR F++A+ +P IFIDEID+I ++R SE +R ELL Q+DG +DD + V+AATN +D AL R RL+++I +P PS + R +L+I+ R++ + DV+ +A + ++GA + VC +A ++A+RR Sbjct: 260 AKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSE--EHEASRRVKAELLVQMDGVGGATENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGREELLRINLRELELADDVDLANIAEKMEGYSGADITNVCRDASLMAMRR 436
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FIGL1_MOUSE (Fidgetin-like protein 1 OS=Mus musculus GN=Fignl1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.694e-21 Identity = 61/175 (34.86%), Postives = 101/175 (57.71%), Query Frame = 3 Query: 9 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG--FSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARIL-QIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 524 + A+Q+ ATF ++ L ++G+G K+VR F +A+ + P +IFIDEID++ ++R D E R ++ E L QLDG SS+DRI V+ ATNR +D A R RL +++ +P P AR +I+ + S++ D + + + +D F+GA + +C EA + +R Sbjct: 461 KCIASQSGATFFSISASSLTSKWVGEGEKMVRALFAVARCQQPAVIFIDEIDSLLSQRGDGEHESSRRIK---TEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVGNLMSKEQCCLSDEETDLVVQQSDGFSGADMTQLCREASLGPIR 630
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: SPAST_CAEEL (Probable spastin homolog spas-1 OS=Caenorhabditis elegans GN=spas-1 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.437e-21 Identity = 73/202 (36.14%), Postives = 111/202 (54.95%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTM-LELLNQLDG--FSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMT-----VHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR-DATEVNHEDFNEGIIQVQA 584 A+A A ++ F ++ L ++GD K +R FQ+A+ P IIFIDEID+I +R + D EV R M E L Q DG S+DDRI VI ATNR LD A++R R ++I L P EEAR ++ +K + D+ + +A +T F+ + L A+C EA M+ +R D ++++ D E I +++A Sbjct: 289 AKAVAGESKQMFFNISASSLTSKWVGDSEKTIRGLFQIARNAQPSIIFIDEIDSILCERSEK----DAEVSRRMKTEFLVQFDGATSSADDRILVIGATNRPHELDDAVLR--RFPKRIMLNLPDEEARKELITKTLKKHNMMDGLISSDIRY--IASNTSGFSNSDLVALCKEAAMVPIREIDRSKLSMTD-GEKIRKIRA 481
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: KATL2_HUMAN (Katanin p60 ATPase-containing subunit A-like 2 OS=Homo sapiens GN=KATNAL2 PE=2 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 7.437e-21 Identity = 65/201 (32.34%), Postives = 115/201 (57.21%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFS-SDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQ------IHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEVNHEDFNEGIIQVQ 581 A+A A + TF ++ +V + GD KLVR F+LA+ +P IF+DE++++ ++R + R ELL Q+DG + S+D + V+AA+N LD A++R RL+++I + PS EAR ++ SR + +H ++ + L++ T+ ++G+ +K VC EA M +R+ DA E NH+ + + ++Q Sbjct: 304 AKAVATECKTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESVMSQRGTASGGEHEGSLRMKTELLVQMDGLARSEDLVFVLAASNLPWELDCAMLR--RLEKRILVDLPSREARQAMIYHWLPPVSKSRALELHTELEYSVLSQETEGYSGSDIKLVCREAAMRPVRKIFDALE-NHQSESSDLPRIQ 501
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: VPS4B_PONAB (Vacuolar protein sorting-associated protein 4B OS=Pongo abelii GN=VPS4B PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.713e-21 Identity = 63/177 (35.59%), Postives = 100/177 (56.50%), Query Frame = 3 Query: 6 ARACAAQTN-ATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD-DRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIH-SRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 527 A+A A + N +TF ++ LV ++G+ KLV++ FQLA+E P IIFIDEID++ R ++E R ++ E L Q+ G D D I V+ ATN +LD A+ R R +++I +P P ARA + ++H + +F EL R TD ++GA + + +A M +R+ Sbjct: 184 AKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIK---TEFLVQMRGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRK 355
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: MEI1_CAEEL (Meiotic spindle formation protein mei-1 OS=Caenorhabditis elegans GN=mei-1 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.713e-21 Identity = 65/182 (35.71%), Postives = 107/182 (58.79%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREV-QRTMLELLNQLDGFSS---DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATE 539 ARA A+++++TF ++ L + GD K+VR F+LA+ +P IIFIDEID +G +R + SG+ E +R E L Q+DG + R+ V+AATN LD AL R R +++I +P P +AR ++++ ++N+++LA T+ F+GA + ++C A + LRR T+ Sbjct: 243 ARAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGN---SGEHEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRR--RFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTAAINVLRRYDTK 419
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: KTNA1_SALSA (Katanin p60 ATPase-containing subunit A1 OS=Salmo salar GN=katna1 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.713e-21 Identity = 62/181 (34.25%), Postives = 107/181 (59.12%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGF--SSDDR-----IKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 527 A+A A + TF ++ L + G+ KLVR F++A+ +P IFIDEID++ ++R SE +R ELL Q+DG +SD+ + V+AATN +D AL R RL+++I +P PS + R +L+I+ +++ + DV+ ++A ++ ++GA + VC +A ++A+RR Sbjct: 254 AKAVATECRTTFFNVSSSTLTSKYRGESEKLVRILFEMARFYAPTTIFIDEIDSMCSRRGTSE--EHEASRRVKAELLVQMDGVGGASDNEDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPSAKGRVELLRINLKELELANDVDMAKIAEQSEGYSGADITNVCRDASLMAMRR 430
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: SPAST_DROSI (Spastin OS=Drosophila simulans GN=spas PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.269e-20 Identity = 69/216 (31.94%), Postives = 109/216 (50.46%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVN-FEELARSTDDFNGAQLKAVCVEAGMLALRRDATE------------VNHEDFNEGIIQV-QAKKKASLNYY 611 ARA A + +ATFL ++ L ++GDG KLVR F +A+ P IIFIDE+D++ ++R SE R ++ L + L G DRI V+AATNR LD A +R R +++ + P E+ R +L +K D LA+ TD ++G+ L A +A + +R E + +DF+ + ++ ++ SLN Y Sbjct: 533 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSSEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTARPKDAALEPIRELNVEQVKCLDISAMRAITEQDFHSSLKRIRRSVAPQSLNSY 746 The following BLAST results are available for this feature:
BLAST of CN185593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 377
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185593 ID=CN185593; Name=CN185593; organism=Citrus sinensis; type=EST; length=736bpback to top |