CN185593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: TBP6_YEAST (Probable 26S protease subunit YTA6 OS=Saccharomyces cerevisiae GN=YTA6 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.296e-20 Identity = 64/199 (32.16%), Postives = 106/199 (53.27%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSS------------DDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARA-RILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 563 A+A A ++N+TF ++ L+ ++G+ KLVR F +AK+ SP IIFIDEID++ T R D+E R ++ ELL Q SS D R+ V+ ATN +D A R R RK+ +P P E R + ++ +++ D+++E + T+ F+G+ L ++ EA M +R ++ DF++ Sbjct: 521 AKAVATESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSMLTARSDNENESSRRIK---TELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARR--RFSRKLYIPLPDYETRLYHLKRLMAKQKNSLQDLDYELITEMTEGFSGSDLTSLAKEAAMEPIRDLGDKLMFADFDK 714
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: SPAST_DROMO (Spastin OS=Drosophila mojavensis GN=spas PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.296e-20 Identity = 60/174 (34.48%), Postives = 94/174 (54.02%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVN-FEELARSTDDFNGAQLKAVCVEAGMLALR 524 ARA A + +ATFL ++ L ++GDG KLVR F +A+ P IIFIDE+D++ ++R +E R ++ L + L G DRI V+AATNR LD A +R R +++ + P + R +L +K D LA+ TD ++G+ L A+ +A + +R Sbjct: 540 ARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHLQPSIIFIDEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPEVQTRELLLSRLLQKQGSPLDTEALARLAKITDGYSGSDLTALAKDAALEPIR 711
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: SPAST_BRUMA (Probable spastin homolog Bm1_53365 OS=Brugia malayi GN=Bm1_53365 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.296e-20 Identity = 66/179 (36.87%), Postives = 98/179 (54.75%), Query Frame = 3 Query: 6 ARACAAQTNAT-FLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGF--SSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEE---LARSTDDFNGAQLKAVCVEAGMLALR 524 ARA A + +T FL ++ L ++GD K+VR FQ+A+ P IIFIDEID+I +R + E R R E L Q+DG S DDR+ VI ATNR + LD A++R R ++I + P+ AR +++ K D+ + LA T ++ + L A+C EA M+ +R Sbjct: 228 ARAVAGECGSTMFLNVSAASLTSKWVGDAEKIVRALFQIARNGQPTIIFIDEIDSILCERNEKETEVSR---RMKTEFLIQMDGMLSSKDDRLLVIGATNRPEELDSAILR--RFPKRILIDVPNAAARLKLIMSLLEKTKTSFDLGLTQRQILAEWTHGYSNSDLVALCREAAMVPIR 401
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: ATD2B_HUMAN (ATPase family AAA domain-containing protein 2B OS=Homo sapiens GN=ATAD2B PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.296e-20 Identity = 61/164 (37.20%), Postives = 83/164 (50.61%), Query Frame = 3 Query: 39 FLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVH-PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 527 F G + ++G+ + +R F A P IIF DEID + R + + T+L L+ DG + I VI ATNR D +DPAL R GR DR+ P ++AR ILQIH+R D ELA + GA +KA+C EA ++ALRR Sbjct: 467 FFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALM---DGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQKARKHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALRR 627
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: VPS4B_BOVIN (Vacuolar protein sorting-associated protein 4B OS=Bos taurus GN=VPS4B PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.222e-20 Identity = 60/177 (33.90%), Postives = 100/177 (56.50%), Query Frame = 3 Query: 6 ARACAAQTN-ATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSD-DRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIH-SRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 527 A+A A + N +TF ++ LV ++G+ KLV++ FQLA+E P IIFIDEID++ R ++E R ++ E L Q+ G D D I V+ ATN +LD A+ R R +++I +P P ARA + ++H + +F +L + T+ ++GA + + +A M +R+ Sbjct: 184 AKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIK---TEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEAHARAAMFKLHLGTTQNSLTEADFRDLGKKTEGYSGADISIIVRDALMQPVRK 355
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FIGL1_XENTR (Fidgetin-like protein 1 OS=Xenopus tropicalis GN=fignl1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.222e-20 Identity = 60/175 (34.29%), Postives = 97/175 (55.43%), Query Frame = 3 Query: 9 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG--FSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARI-LQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 524 + A Q+ ATF ++ L ++G+G K+VR F +A+ P +IFIDEID++ ++R + E R ++ E L QLDG SSDDRI V+ ATNR +D A R RL +++ +P P AR +I + + +++ + E + D F+GA + +C EA + +R Sbjct: 434 KCIACQSGATFFSISASSLTSKWVGEGEKMVRALFTVARCHQPAVIFIDEIDSLLSQRGEGEHESSRRIK---TEFLVQLDGATTSSDDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVVSLMAKEHCSLAEQEVEAIVLQADGFSGADMTQLCREAALGPIR 603
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: VPS4A_RAT (Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus GN=Vps4a PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.074e-19 Identity = 60/178 (33.71%), Postives = 105/178 (58.99%), Query Frame = 3 Query: 6 ARACAAQTN-ATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGF-SSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVH--PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 527 A+A A + N +TF ++ L+ ++G+ KLV++ F+LA++ P IIFIDE+D++ R ++E R ++ E L Q+ G +++D V+ ATN +LD A+ R R +++I +P P E ARA++ ++H T H D N ELAR T+ ++GA + + ++ M +R+ Sbjct: 177 AKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIK---TEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGS-TPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: VPS4A_MOUSE (Vacuolar protein sorting-associated protein 4A OS=Mus musculus GN=Vps4a PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.074e-19 Identity = 60/178 (33.71%), Postives = 105/178 (58.99%), Query Frame = 3 Query: 6 ARACAAQTN-ATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGF-SSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVH--PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 527 A+A A + N +TF ++ L+ ++G+ KLV++ F+LA++ P IIFIDE+D++ R ++E R ++ E L Q+ G +++D V+ ATN +LD A+ R R +++I +P P E ARA++ ++H T H D N ELAR T+ ++GA + + ++ M +R+ Sbjct: 177 AKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIK---TEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGS-TPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: VPS4A_HUMAN (Vacuolar protein sorting-associated protein 4A OS=Homo sapiens GN=VPS4A PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.074e-19 Identity = 60/178 (33.71%), Postives = 105/178 (58.99%), Query Frame = 3 Query: 6 ARACAAQTN-ATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGF-SSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVH--PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 527 A+A A + N +TF ++ L+ ++G+ KLV++ F+LA++ P IIFIDE+D++ R ++E R ++ E L Q+ G +++D V+ ATN +LD A+ R R +++I +P P E ARA++ ++H T H D N ELAR T+ ++GA + + ++ M +R+ Sbjct: 177 AKAVATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENESEAARRIK---TEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRR--RFEKRIYIPLPEEAARAQMFRLHLGS-TPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRK 348
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: NSF_PONAB (Vesicle-fusing ATPase OS=Pongo abelii GN=NSF PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.074e-19 Identity = 66/188 (35.11%), Postives = 104/188 (55.32%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLA-GPQLVQMFIGDGAKLVRDAFQLAKEKSPC--------IIFIDEIDAIGTKRFDSEVSGDREVQRTML-ELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVH----PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR 527 AR NA K+ GP+++ ++G+ +R F A+E+ II DEIDAI +R ++G V T++ +LL+++DG + I VI TNR D++D AL+R GRL+ K+E+ P E+ R +IL IH+ +M H DV+ +ELA T +F+GA+L+ + A A+ R Sbjct: 270 ARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQR--GSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAMETKNFSGAELEGLVRAAQSTAMNR 455 The following BLAST results are available for this feature:
BLAST of CN185593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 377
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185593 ID=CN185593; Name=CN185593; organism=Citrus sinensis; type=EST; length=736bpback to top |