CN185593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: TBP7_CAEBR (TAT-binding homolog 7 OS=Caenorhabditis briggsae GN=lex-1 PE=3 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.512e-18 Identity = 59/176 (33.52%), Postives = 83/176 (47.16%), Query Frame = 3 Query: 6 ARACAAQTN-ATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDV--NFEELARSTDDFNGAQLKAVCVEAGMLALR 524 A C N F G + ++G+ + +R F A P IIF DEID + R + + T+L L++ LDG + VI ATNR D LDPAL R GR DR++ P AR IL IH+ K + + +A T + GA LK +C E+ ++ LR Sbjct: 460 ANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGE---VVVIGATNRLDSLDPALRRPGRFDRELRFSLPDLNARRHILDIHTSKWEENKPTPETLDGIAEKTSGYCGADLKFLCTESVLIGLR 632
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: VPS4_YEAST (Vacuolar protein sorting-associated protein 4 OS=Saccharomyces cerevisiae GN=VPS4 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.696e-18 Identity = 58/185 (31.35%), Postives = 100/185 (54.05%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDR-IKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIH-SRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 554 A+A A + N+TF ++ LV ++G+ KLV+ F +A+E P IIFIDE+DA+ R + E R ++ ELL Q++G +D + + V+ ATN LD A+ R R +R+I +P P AR + +I+ V ++ L T+ ++G+ + V +A M +R+ + + +D Sbjct: 183 AKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIK---TELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRR--RFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKD 362
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: SEC18_YEAST (Vesicular-fusion protein SEC18 OS=Saccharomyces cerevisiae GN=SEC18 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.313e-17 Identity = 62/202 (30.69%), Postives = 105/202 (51.98%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLA-GPQLVQMFIGDGAKLVRDAFQLAK--------EKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKM----TVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR------RDATEVNHED 554 AR NA K+ GP+++ ++G + +R+ F+ A+ E S II DE+D++ +R S G + +LL ++DG + I VI TNR D++D AL+R GR + ++E+ P E+ R +I I ++KM + DVN ELA T +F+GA+++ + A A+ + AT++N +D Sbjct: 291 ARKIGTMLNAKEPKIVNGPEILSKYVGSSEENIRNLFKDAEAEYRAKGEESSLHIIIFDELDSVFKQR-GSRGDGTGVGDNVVNQLLAKMDGVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIFDIQTKKMRENNMMSDDVNLAELAALTKNFSGAEIEGLVKSASSFAINKTVNIGKGATKLNTKD 491
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: MPA_RHOER (Proteasome-associated ATPase OS=Rhodococcus erythropolis GN=mpa PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.239e-17 Identity = 59/158 (37.34%), Postives = 92/158 (58.23%), Query Frame = 3 Query: 39 FLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKS----PCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCV 500 FL + GP+L+ F+G+ + +R FQ A+EK+ P I+F DE+D+I R S VS D E + +LL+++DG + + VI A+NR D++DPA++R GRLD KI++ P E+ I S+ + +N ++LA D A LKA+ V Sbjct: 311 FLNIKGPELLNKFVGETERHIRMIFQRAREKASEGTPVIVFFDEMDSIFRTR-GSGVSSDVETT-VVPQLLSEIDGVEGLENVIVIGASNREDMIDPAILRPGRLDVKIKIERPDAESAQ---DIFSKYLVDGLPINADDLAEFGGD-RTACLKAMIV 462
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: ATAD1_RAT (ATPase family AAA domain-containing protein 1 OS=Rattus norvegicus GN=Atad1 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.239e-17 Identity = 62/193 (32.12%), Postives = 95/193 (49.22%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTM-LELLNQLDGFSSDDRIKVI--AATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQ 575 A+A A + F+ L L + G+ KL F LA + P IIFIDEID+ R S D E M + ++ DG +D +VI ATNR LD A+MR R+ + + P+ + R IL++ + V V+ E+A+ TD F+G+ LK +C +A +L +R + E +E I+ Sbjct: 143 AKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNR----SSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIR 329
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: ATAD1_MOUSE (ATPase family AAA domain-containing protein 1 OS=Mus musculus GN=Atad1 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.239e-17 Identity = 62/193 (32.12%), Postives = 95/193 (49.22%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTM-LELLNQLDGFSSDDRIKVI--AATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQ 575 A+A A + F+ L L + G+ KL F LA + P IIFIDEID+ R S D E M + ++ DG +D +VI ATNR LD A+MR R+ + + P+ + R IL++ + V V+ E+A+ TD F+G+ LK +C +A +L +R + E +E I+ Sbjct: 143 AKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNR----SSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIR 329
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: ATAD1_HUMAN (ATPase family AAA domain-containing protein 1 OS=Homo sapiens GN=ATAD1 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.239e-17 Identity = 62/193 (32.12%), Postives = 95/193 (49.22%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTM-LELLNQLDGFSSDDRIKVI--AATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQ 575 A+A A + F+ L L + G+ KL F LA + P IIFIDEID+ R S D E M + ++ DG +D +VI ATNR LD A+MR R+ + + P+ + R IL++ + V V+ E+A+ TD F+G+ LK +C +A +L +R + E +E I+ Sbjct: 143 AKATAKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNR----SSSDHEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMR--RMPTRFHINQPALKQREAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNSTSEESHDEDEIR 329
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FTSHC_ARATH (Cell division protease ftsH homolog 12, chloroplastic OS=Arabidopsis thaliana GN=FTSH12 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.924e-17 Identity = 56/192 (29.17%), Postives = 96/192 (50.00%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG---------FSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHED 554 AR A ++ F+ +G + AK + + F +A+ +P +F+DEIDAI + D + T L+ QLDG FS + I ATNR D LD +RSGR+DR++ + P + R +I +HS + D++F +L T F+GA ++ + EA ++++R+ + + +D Sbjct: 543 ARTLAKESGLPFVFASGAEFTDSEKSGAAK-INEMFSIARRNAPAFVFVDEIDAIAGRH----ARKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVHSAGKNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRKGRSYIYQQD 729
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: NSF_DICDI (Vesicle-fusing ATPase OS=Dictyostelium discoideum GN=nsfA PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.988e-17 Identity = 60/182 (32.97%), Postives = 95/182 (52.20%), Query Frame = 3 Query: 48 LAGPQLVQMFIGDGAKLVRDAFQLAKEKSPC--------IIFIDEIDAI----GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKM----TVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVN 545 ++GP ++ ++G + +R F+ A+ + II DE+DAI G+++ DS V GD V +LL +DG S + I VI TNR D++D AL+R GRL+ +E+ P E R +I +IH+ KM + DVN A +T +++GA+++ V A A R N Sbjct: 289 VSGPSILNKYVGQSEENIRMLFRDAEIEQKAKGDDSGLHIIIFDELDAICKSRGSRQGDSGV-GDSVVN----QLLAMIDGVESLNNILVIGMTNRKDMIDEALLRPGRLEVHVEISLPDEHGREQIFKIHTAKMRDQNALDKDVNLANYAHTTRNYSGAEIEGVVKSAASYAFSRQVDTKN 465
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: MSP1_YEAST (Protein MSP1 OS=Saccharomyces cerevisiae GN=MSP1 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 8.509e-17 Identity = 56/175 (32.00%), Postives = 95/175 (54.29%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTM-LELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPD-VNFEELARSTDDFNGAQLKAVCVEAGMLALR 524 A+A A ++ A F+ + ++ + G+ K+V F LA + PCIIFIDEID+ +R S D EV T+ E + DG ++ R+ +I ATNR + +D A +R RL ++ + P + R +IL + + + D + + +A +T F+G+ LK +C EA + A + Sbjct: 143 AKALAKESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDSFLRER----SSTDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLR--RLPKRFLVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAK 311 The following BLAST results are available for this feature:
BLAST of CN185593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 377
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185593 ID=CN185593; Name=CN185593; organism=Citrus sinensis; type=EST; length=736bpback to top |