CN185593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FIGN_DANRE (Fidgetin OS=Danio rerio GN=fign PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.575e-15 Identity = 53/169 (31.36%), Postives = 94/169 (55.62%), Query Frame = 3 Query: 9 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGF--SSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARIL-QIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEA 506 R A+Q A FL L+G LV ++G+G K+V+ +F +A+ + P ++FI ++D + S++S + V R ELL QLDG S ++ + V+ +T++ + +D +L R +++ +P P AR +I+ Q+ S+ D L + TD F+G + +C EA Sbjct: 515 RCMASQLGAAFLLLSGSALVTKWLGEGEKIVQASFLIARCRQPSVVFISDVDLL----LSSQLSEESPVNRIKSELLLQLDGVLSSPEEHVLVVCSTSKPEEIDESLRR--YFVKRLLVPLPDATARHQIISQLLSQHNYCLSDKEVTLLVQRTDGFSGLDVVRLCQEA 677
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: ATD1A_DANRE (ATPase family AAA domain-containing protein 1-A OS=Danio rerio GN=atad1a PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 5.162e-14 Identity = 48/173 (27.75%), Postives = 85/173 (49.13%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 524 A+A A + F+ L L + G+ KL F LA + PCIIF+DEID+ R + ++ + L + LD + ++ V+ ATNR +D A++R R+ + P+ R IL++ + +N +E+A ++ ++G+ LK +C +A M +R Sbjct: 146 AKATAKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNRSSMDHEATAMMKAQFMSLWDGLD-TGENSQVMVMGATNRPQDVDAAILR--RMPTAFHVGLPNAAQREEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAAMYRVR 315
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: YKX4_SCHPO (Uncharacterized AAA domain-containing protein C328.04 OS=Schizosaccharomyces pombe GN=SPAC328.04 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.562e-13 Identity = 56/186 (30.11%), Postives = 92/186 (49.46%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGF---------SSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARA----RILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALR 524 ARA A ++ + F ++ L F+G+ KLVR F LAK+ SP IIF+DEID++ + R S+ + +R E L Q + R+ V+AATN +D A R R R+ +P P E R +L+ +++ + E + ++T+ ++G+ L A+ +A M LR Sbjct: 509 ARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSLLSAR-SSDGNEHETSRRIKTEFLIQWSSLARAAASRQTADHPRVLVLAATNLPWCIDDAARR--RFVRRTYIPLPDETTRRLHLNNLLKYQKHSLSLE---DIEAIVKATEYYSGSDLTALAKDAAMGPLR 688
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: YCF46_GRATL (Uncharacterized AAA domain-containing protein ycf46 OS=Gracilaria tenuistipitata var. liui GN=ycf46 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.370e-13 Identity = 55/170 (32.35%), Postives = 85/170 (50.00%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSG-DREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKM--TVHPDVNFEELARSTDDFNGAQLKAVCVEA 506 A+A + Q N LKL ++ +G + +R + A++ SPCI++IDEID T+ + SG + V TML L++ + VIA N+ L L+R GR D L PS E R +I QIH K + + L++ TD F+GA+++ +EA Sbjct: 277 AKAISGQWNLPLLKLDMGKIFASLVGQSEERMRHMIKTAEQSSPCILWIDEIDKCFTRLNNYTDSGTNGRVLSTMLTWLSE-----KKKPVFVIATANQVLSLPSELLRKGRFDEIFFLNLPSLEEREKIFQIHLMKFRPLSWRKYDIKYLSKLTDQFSGAEIEQAIIEA 441
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: YCF2_MESVI (Protein ycf2 OS=Mesostigma viride GN=ycf2 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.454e-13 Identity = 60/226 (26.55%), Postives = 101/226 (44.69%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFD-----------------SEVSGDREVQRTML-ELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRK-MTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATE------VNHEDFNEGIIQVQAKKKASLNY 608 A+A + + +L + G Q G V D F+ + SPCI++IDEID+I +R + S ++ D++ T+L + L +DG+ + + +I ATNR + LD A+MR GR DR+I P E R IL+I R + D +A + NG L+ + +L+ + +N + F+ + +V + NY Sbjct: 395 AKAMSYEAETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPCILYIDEIDSIAERREEANKQLEQLKTIGDSIEGSNINIDQKPSDTVLMQFLIYMDGYKKRNDLIIIGATNRIETLDDAIMRPGRFDRQIVFSPPFFEERKDILRIFLRNTKALVDDTTKTMMAERSIGLNGCDLRLLADNILLLSALESRNQQKTIPVINEDTFDRALERVSRIRHIISNY 620
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: FTSH_OLTVI (Cell division protease ftsH homolog OS=Oltmannsiellopsis viridis GN=ftsH PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11 Identity = 52/182 (28.57%), Postives = 91/182 (50.00%), Query Frame = 3 Query: 30 NATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKE------KSPCIIFIDEIDAIGTKRFDS-----EVSGDREVQRTMLE----LLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 530 N + K +G QL M G + VR +L KE + D + T+ +S E S + EV++ L LL ++DG + + + V ATNR ++LDPAL+R GR D+ + + P ++ R IL+++++K+ +++E A T + A L A+ ++ +LA+ D Sbjct: 1425 NCLYPKNSGQQL-SMTDGSKSSTVRTTTRLGKECPFPPHTTRSFGLDTNKDEMETRSSESTKASHESSNEMEVEKNQLSALIRLLVEMDGLNPLNGVIVFGATNRPEVLDPALIRPGRFDQILPIELPGKQKRVEILKLYAKKLGTAKSISWEYFANRTVGLSAADLAAIMNQSTILAVFND 1605
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: YCF46_GUITH (Uncharacterized AAA domain-containing protein ycf46 OS=Guillardia theta GN=ycf46 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11 Identity = 51/178 (28.65%), Postives = 85/178 (47.75%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEID-AIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVH--PDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 530 A++ A + N LKL +L IG+ VR Q A+ SPCI++IDEID A F+++ + V T + L++ + V+A N D L P L+R GR D + P + R I ++H +K+ + E L+ ++ F+GA+++ EA +A + Sbjct: 292 AKSIANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQFAETISPCILWIDEIDKAFTGSNFNNDSGTTKRVFGTFITWLSE-----KKSPVFVVATANNIDSLPPELLRKGRFDEVFFIGLPDLKERECIFKVHLKKIRPKSWSTYDTEILSAQSNRFSGAEIEESIYEAMHIAFNEN 464 The following BLAST results are available for this feature:
BLAST of CN185593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 377
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185593 ID=CN185593; Name=CN185593; organism=Citrus sinensis; type=EST; length=736bpback to top |