CN185593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.485e-53 Identity = 106/193 (54.92%), Postives = 143/193 (74.09%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA 584 A+A A +T ATF+++ G +LV FIG+GA+LVR+ F+LA+EK+P I+FIDEIDAI +KR D SGDREVQRTML+LL +LDGF D +KVIAATNR D++DPA++R GR DR IE+P PS R IL IH+RK + PDV+ E +A+ T+ F+GA LKAV VEAG A+RR + + +D + + +V+A Sbjct: 190 AKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGTSGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMIKAVEKVKA 382
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.485e-53 Identity = 106/194 (54.64%), Postives = 137/194 (70.62%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 587 ARA A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R + GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIE P P+EEAR IL+IHSRKM + +N ++A +GA++K VC EAGM ALR V EDF + +V K Sbjct: 200 ARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 393
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.485e-53 Identity = 106/194 (54.64%), Postives = 137/194 (70.62%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 587 ARA A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R + GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIE P P+EEAR IL+IHSRKM + +N ++A +GA++K VC EAGM ALR V EDF + +V K Sbjct: 200 ARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 393
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.485e-53 Identity = 106/194 (54.64%), Postives = 137/194 (70.62%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 587 ARA A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R + GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIE P P+EEAR IL+IHSRKM + +N ++A +GA++K VC EAGM ALR V EDF + +V K Sbjct: 200 ARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 393
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.485e-53 Identity = 106/194 (54.64%), Postives = 137/194 (70.62%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 587 ARA A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R + GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIE P P+EEAR IL+IHSRKM + +N ++A +GA++K VC EAGM ALR V EDF + +V K Sbjct: 200 ARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 393
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.485e-53 Identity = 106/194 (54.64%), Postives = 137/194 (70.62%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 587 ARA A T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R + GD EVQRTMLELLNQLDGF + IKVI ATNR DILD AL+R GR+DRKIE P P+EEAR IL+IHSRKM + +N ++A +GA++K VC EAGM ALR V EDF + +V K Sbjct: 200 ARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 393
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.532e-53 Identity = 99/203 (48.77%), Postives = 146/203 (71.92%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV-QAKKKASLNYY 611 ARA A+ +A FLK+ ++ +IG+ A+L+R+ F A+E PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQLDGF + ++K+I ATNR D+LDPAL+R GRLDRKIE+P P+E++R IL+IH+ + H ++++E + + + FNGA L+ +C EAGM A+R + V HEDF + + ++ +AKK S ++Y Sbjct: 190 ARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHY 392
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.307e-53 Identity = 99/203 (48.77%), Postives = 145/203 (71.43%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV-QAKKKASLNYY 611 ARA A+ +A FLK+ ++ +IG+ A+L+R+ F A+E PCIIF+DEIDAIG +RF S DRE+QRT++ELLNQLDGF ++K+I ATNR D+LDPAL+R GRLDRKIE+P P+E++R IL+IH+ + H ++++E + + + FNGA L+ +C EAGM A+R + V HEDF + + ++ +AKK S ++Y Sbjct: 190 ARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHY 392
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.307e-53 Identity = 104/195 (53.33%), Postives = 145/195 (74.36%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 587 ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +S +GD EVQRTMLELLNQLDGF + ++IKV+ ATNR DILD AL+R GR+DRKIE P+P+EE+R IL+IHSRKM + ++ +++A + +GA+LKAVC EAGM ALR V EDF + +V K Sbjct: 212 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKK 406
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.307e-53 Identity = 104/195 (53.33%), Postives = 145/195 (74.36%), Query Frame = 3 Query: 6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 587 ARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +S +GD EVQRTMLELLNQLDGF + ++IKV+ ATNR DILD AL+R GR+DRKIE P+P+EE+R IL+IHSRKM + ++ +++A + +GA+LKAVC EAGM ALR V EDF + +V K Sbjct: 212 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKK 406 The following BLAST results are available for this feature:
BLAST of CN185593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 377
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185593 ID=CN185593; Name=CN185593; organism=Citrus sinensis; type=EST; length=736bpback to top |