CN185593

Overview
NameCN185593
Unique NameCN185593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length736
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2137 contig Csv1_Contig2137:697..1432. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PRS7_CAEEL (26S protease regulatory subunit 7 OS=Caenorhabditis elegans GN=rpt-1 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.536e-50
Identity = 98/191 (51.31%), Postives = 134/191 (70.16%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 578
            ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K  C+IF DEIDA+G  RFD    GD EVQRTMLEL+NQLDGF     IKV+ ATNR D LDPALMR GRLDRK+E   P    RA IL+IH+++M+V  D+ ++ LAR   +  GA++++VC EAGM A+R        +DF E I +V
Sbjct:  228 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKV 418          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.007e-50
Identity = 95/200 (47.50%), Postives = 140/200 (70.00%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN 605
            A+A A ++NATF+++   +  Q F+G+GA++VR+ F+LA+ K+P I+FIDEIDAIG KR D   SG+RE+QRT+++LL ++DGF   D +K+IAATNR DILDPAL+R GR DR IE+P P+ E R  I +I+ +KM    ++ ++ LA  T+ F+GA++K VC EAG +A+R     VN  D    I +++AK   + N
Sbjct:  185 AKAVATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGTSGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTDLITAIEKIKAKNNKAKN 384          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.470e-50
Identity = 101/196 (51.53%), Postives = 137/196 (69.90%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593
            A+A A + NATF+++ G +LV+ +IG+GA+LV + F+LAKEK+P IIFIDEIDAIG KR D    G+REV RT+++LL ++DGF     +KVIAATNR DILDPAL+R GR DR IE+P P  E R  IL++H+R+M +   V+   +A  T+  +GA LKA+  EAGM A+R   T V  EDF + I +V   +K
Sbjct:  188 AKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLR-GVDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAIDKVLGNEK 382          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.838e-50
Identity = 100/199 (50.25%), Postives = 138/199 (69.35%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 602
            A+A A + NATF+++ G +LV+ +IG+GA+LV + F+LAKEK+P IIFIDEIDAIG KR D    G+REV RT+++LL ++DGF     +KVIAATNR DILDPAL+R GR DR IE+P P  E R  IL++H+R+M +   V+   +A  T+  +GA LKA+  EAGM A+R   T V  EDF + + +V   ++  L
Sbjct:  191 AKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KGVDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERKLL 388          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 5.838e-50
Identity = 100/199 (50.25%), Postives = 139/199 (69.85%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASL 602
            A+A A + NATF+++ G +LV+ +IG+GA+LV + F+LAKEK+P IIFIDEIDAIG KR D    G+REV RT+++LL ++DGF     +KVIAATNR DILDPAL+R GR DR IE+P P  E R  IL++H+R+M +  +V+   +A  T+  +GA LKA+  EAGM A+R   T V  EDF + + +V   ++  L
Sbjct:  191 AKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERKLL 388          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.958e-50
Identity = 99/184 (53.80%), Postives = 132/184 (71.74%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDF 557
            A+A A QT+ATFL++ G +L+Q ++G+G KLVR+ F++A   +P IIFIDEIDAIG KR+++   G REVQRTMLELLNQLDGF + + IKVI ATN+ + LDPAL+R GR+DRKIE   P    + +I  IH+ +MT+   VN E L  S +D +GA +KA+C EAGM+ALR     V  +DF
Sbjct:  220 AKAVANQTSATFLRVVGTELIQEYLGEGPKLVRELFRVADMHAPSIIFIDEIDAIGGKRYNTSSGGRREVQRTMLELLNQLDGFDTRNDIKVIMATNKIEALDPALIRPGRIDRKIEFGMPDAATKKKIFDIHTSRMTLDESVNIELLITSKEDLSGADIKAICTEAGMIALRERRKTVTMKDF 403          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.301e-49
Identity = 100/196 (51.02%), Postives = 136/196 (69.39%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593
            A+A A   NATF+++ G +LV+ FIG+GA+LV + F+LAKEK+P IIFIDEIDAIG KR D    G+REV RT+++LL ++DGF     +KVIAATNR DILDPAL+R GR DR IE+P P  + R  IL++H+RKM +   V+   +A  T+  +GA LKA+  EAGM A+R   T V  +DF + + +V   +K
Sbjct:  189 AKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTRKMNL-KGVDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDFLKAVDKVIGSEK 383          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.301e-49
Identity = 96/202 (47.52%), Postives = 135/202 (66.83%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 611
            A+A A  T+A F+++ G + VQ ++G+G +LVRD F+LA+E SP IIFIDEIDAI TKRFD++   DREVQR ++ELLNQ+DGF     +KVI ATNR D LDPAL+R GRLDRKIE P P    +  I Q+ + KM +  +V+ E+     D  +GA+++++C EAGM A+R++   +  +DF +G      K     N+Y
Sbjct:  201 AKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDFEKGYKASIKKNTHEFNFY 402          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.699e-49
Identity = 94/195 (48.21%), Postives = 135/195 (69.23%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 590
            A+A A ++NA F+ +   +  Q F+G+GA++VR+ F++AK K+P IIFIDEIDAIG KR D   SG+RE+QRT+++LL +LDGF   D +K+IAATNR DILDPAL+R GR DR IE+P P  + R  I  I+ +KM +  ++N E L++ T+ F+GA +K VCVEA  +A+R    +V   D  E I ++  K+
Sbjct:  185 AKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDLVEAINKINVKR 379          
BLAST of CN185593 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.218e-49
Identity = 100/196 (51.02%), Postives = 136/196 (69.39%), Query Frame = 3
Query:    6 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 593
            A+A A   NATF+++ G +LV+ FIG+GA+LV + F++AKEK+P IIFIDEIDAIG KR D    G+REV RT+++LL ++DGF     +KVIAATNR DILDPAL+R GR DR IE+P P    R  IL++H+RKM +  +V+   +A  T+  +GA LKA+  EAGM A+R   T V  EDF + + +V   +K
Sbjct:  189 AKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEILKVHTRKMNLR-NVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQEDFLKAVDKVLGAEK 383          
The following BLAST results are available for this feature:
BLAST of CN185593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
PRS7_CAEEL1.536e-5051.3126S protease regulatory subunit 7 OS=Caenorhabditi... [more]
PSMR_SULTO2.007e-5047.50Proteasome-activating nucleotidase OS=Sulfolobus t... [more]
PSMR_PYRFU4.470e-5051.53Proteasome-activating nucleotidase OS=Pyrococcus f... [more]
PSMR_PYRHO5.838e-5050.25Proteasome-activating nucleotidase OS=Pyrococcus h... [more]
PSMR_PYRAB5.838e-5050.25Proteasome-activating nucleotidase OS=Pyrococcus a... [more]
PRS4_ENCCU9.958e-5053.8026S protease regulatory subunit 4 homolog OS=Encep... [more]
PSMR_PYRKO1.301e-4951.02Proteasome-activating nucleotidase OS=Pyrococcus k... [more]
PRS6B_DICDI1.301e-4947.5226S protease regulatory subunit 6B homolog OS=Dict... [more]
PSMR_SULSO1.699e-4948.21Proteasome-activating nucleotidase OS=Sulfolobus s... [more]
PSMR_THEGJ2.218e-4951.02Proteasome-activating nucleotidase OS=Thermococcus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185593 ID=CN185593; Name=CN185593; organism=Citrus sinensis; type=EST; length=736bp
GAGGGGCTCGTGCTTGTGCAGCACAAACAAATGCTACCTTTTTGAAGCTC
GCAGGCCCTCAACTAGTCCAGATGTTCATTGGAGATGGAGCCAAACTAGT
TCGTGATGCCTTTCAACTTGCAAAGGAGAAGTCCCCCTGCATTATTTTCA
TCGACGAAATTGACGCAATTGGTACAAAGCGGTTTGACAGTGAAGTGAGT
GGAGACAGGGAGGTGCAGCGAACTATGTTAGAGTTGCTCAATCAGCTCGA
TGGATTTAGCAGCGATGATCGGATTAAGGTCATAGCAGCAACAAATCGTG
CTGATATCCTGGACCCTGCTCTTATGCGATCTGGCCGTTTGGATCGCAAG
ATCGAGTTACCACATCCGAGTGAGGAAGCTAGAGCTCGCATTTTGCAAAT
CCATTCGAGGAAGATGACTGTTCACCCGGATGTCAACTTCGAAGAACTTG
CTCGATCCACTGACGATTTCAATGGGGCACAACTAAAAGCTGTTTGTGTT
GAAGCAGGGATGCTTGCTCTTCGCCGTGATGCGACTGAGGTCAACCATGA
GGATTTCAATGAAGGTATCATTCAGGTGCAGGCTAAGAAAAAGGCTAGCT
TAAACTACTATGCATAGACACATCCAAAGGCGAAGTTTTAGCCTCTACTT
CAATTGGTAATTAATATATTTTGGGTTGAATATTAAAAAATGGGTATTAA
ACATTGTCTTTGTACTGTACATAATATGTTATAATA
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