CN185592
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.152e-48 Identity = 98/204 (48.04%), Postives = 139/204 (68.14%), Query Frame = -2 Query: 142 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQA--KKKASLNYY 747 ARA A +T+ATF+++ G +LVQ ++G+GA++VR+ F++A+ K CIIF DEIDA+G RFD GD EVQRTMLEL+ QLDGF IKV+ ATNR + LDPAL+R GR+DRK+E P E RA I +IHS+ M+V + +E ++R + GA+L++VC EAGM A+R +DF + + +V + KK +S + Y Sbjct: 260 ARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKVISGYKKFSSTSRY 463
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS6B_RAT (26S protease regulatory subunit 6B OS=Rattus norvegicus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.566e-48 Identity = 96/202 (47.52%), Postives = 132/202 (65.35%), Query Frame = -2 Query: 142 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 747 A+A A T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL+R GRLDRKIE P P + I + KM + +V+ E+ D +GA + ++C E+GMLA+R + V +DF + V K + +Y Sbjct: 216 AKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFY 417
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.566e-48 Identity = 96/202 (47.52%), Postives = 132/202 (65.35%), Query Frame = -2 Query: 142 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 747 A+A A T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL+R GRLDRKIE P P + I + KM + +V+ E+ D +GA + ++C E+GMLA+R + V +DF + V K + +Y Sbjct: 216 AKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFY 417
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 192.2 bits (487), Expect = 2.566e-48 Identity = 96/202 (47.52%), Postives = 132/202 (65.35%), Query Frame = -2 Query: 142 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 747 A+A A T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL+R GRLDRKIE P P + I + KM + +V+ E+ D +GA + ++C E+GMLA+R + V +DF + V K + +Y Sbjct: 216 AKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFY 417
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.566e-48 Identity = 96/202 (47.52%), Postives = 132/202 (65.35%), Query Frame = -2 Query: 142 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 747 A+A A T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL+R GRLDRKIE P P + I + KM + +V+ E+ D +GA + ++C E+GMLA+R + V +DF + V K + +Y Sbjct: 216 AKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFY 417
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 9.751e-48 Identity = 96/202 (47.52%), Postives = 130/202 (64.36%), Query Frame = -2 Query: 142 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 747 A+A A T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF + +KVI ATNRAD LDPAL+R GRLDRKIE P P + I + KM + +V+ E+ D +GA + ++C GMLA+R A V +DF + V K + +Y Sbjct: 216 AKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRETAYIVLAKDFEKAYKTVIKKDEQEHEFY 417
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 9.751e-48 Identity = 92/202 (45.54%), Postives = 131/202 (64.85%), Query Frame = -2 Query: 142 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 747 A+A A T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDE+DAI T RFD++ DREVQR ++ELLNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIE P P + + Q+ + KM + +V+ E+ D + A++ A+C EAGM A+R++ + +DF +G K +Y Sbjct: 206 AKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRANVKKPDTDFEFY 407
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.274e-47 Identity = 92/202 (45.54%), Postives = 131/202 (64.85%), Query Frame = -2 Query: 142 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 747 A+A A T A F+++ G + VQ ++G+G ++VRD F+LAKE +P IIFIDE+DAI T RFD++ DREVQR ++ELLNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIE P P + + Q+ + KM + +V+ E+ D + A++ A+C EAGM A+R++ + +DF +G K +Y Sbjct: 211 AKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFY 412
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.274e-47 Identity = 95/202 (47.03%), Postives = 128/202 (63.37%), Query Frame = -2 Query: 142 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 747 A+A AA T A+F+++ G + VQ ++G+G ++VRD F+LAKE SP IIFIDEIDAI TKRFD++ DREVQR +LELLNQ+DGF +KVI ATNR D LDPAL+R GRLDRKIE P P + + +M + DV+ E+ D +GA + ++C EAGM A+R + V +D + V K +Y Sbjct: 212 AKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVVKKDTNDFEFY 413
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 8.255e-47 Identity = 91/201 (45.27%), Postives = 130/201 (64.68%), Query Frame = -2 Query: 142 RACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 744 +A A T ATF+++ G + VQ ++G+G ++VRD F+LA+EK+P I+FIDE+D+I TKRFD+ S DREVQR ++ELLNQ+DGF +KVI ATNRAD +DPAL+R GRLDRKIE P P + + + KM+++ V+ E L + + A + ++C EAGMLA+R V DF E +V + +Y Sbjct: 186 KAVANHTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDASTSADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDFEEAYSKVVERSGTQPAFY 386 The following BLAST results are available for this feature:
BLAST of CN185592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 377
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185592 ID=CN185592; Name=CN185592; organism=Citrus sinensis; type=EST; length=751bpback to top |