CN185592

Overview
NameCN185592
Unique NameCN185592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2137 contig Csv1_Contig2137:698..1448. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PSMR_METMA (Proteasome-activating nucleotidase OS=Methanosarcina mazei GN=pan PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.902e-53
Identity = 97/191 (50.79%), Postives = 143/191 (74.87%), Query Frame = -2
Query:  175 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 747
            A+A A +TNATF+++ G +LVQ +IGDG+KLVR+ F++A++K+P IIFIDE+D+I  +R +     DREVQRT+++LL ++DGF     I++IAATNR D+LDPA++R GR DR + +P P  EAR +IL+IH  KMT+  D++F++LA++T+  +GA LKA+  EAGM A+RRD   V  E+F E + +V
Sbjct:  210 AKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEAGMFAVRRDKELVEMEEFLEAVEKV 400          
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.007e-52
Identity = 107/195 (54.87%), Postives = 139/195 (71.28%), Query Frame = -2
Query:  166 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV-SGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 747
            ARA A  T+  F++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R DS   SGD EVQRTMLELLNQLDGF +   IKVI ATNR DILDPAL+R GR+DRKIE P PS EARA IL+IHSR M +   ++ + +A   +  +GA+LK VC EAGM ALR     V  EDF   + +V  K
Sbjct:  196 ARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAKVLNK 390          
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3)

HSP 1 Score: 206.838 bits (525), Expect = 1.007e-52
Identity = 102/195 (52.31%), Postives = 137/195 (70.26%), Query Frame = -2
Query:  163 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKK 747
            A+A A QT+ATFL++ G +L+Q ++GDG +L R  F++A E +P I+FIDEIDAIGTKR+DS   G+RE+QRTMLELLNQLDGF     +KVI ATN+ + LDPAL+R GR+DRKI   +P    + +IL IH+ KM +  DVN E L  + DD +GA ++A+C EAG+LALR    +V  EDF +   +V   K
Sbjct:  233 AKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNK 427          
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS10_DICDI (26S protease regulatory subunit S10B OS=Dictyostelium discoideum GN=psmC6 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.315e-52
Identity = 97/196 (49.49%), Postives = 137/196 (69.90%), Query Frame = -2
Query:  160 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 747
            ARA A+   A FLK+    +V  +IG+ A+++R+ F  A++  PC+IF+DEIDAIG +RF    S DRE+QRT++ELLNQ+DGF +  ++K+I ATNR D+LDPAL+R GRLDRKIE+P P+E  R  +L+IH+  +T H DV++E +A+  D FN A L+ VC EAGM A+R +   V  EDF + + + Q  KK
Sbjct:  188 ARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAERDYVMEEDFMKAVRKCQEAKK 383          
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PSMR_METAC (Proteasome-activating nucleotidase OS=Methanosarcina acetivorans GN=pan PE=3 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 1.717e-52
Identity = 97/191 (50.79%), Postives = 142/191 (74.35%), Query Frame = -2
Query:  175 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQV 747
            A+A A +TNATF+++ G +LVQ +IGDG+KLVR+ F++A++K+P IIFIDE+D+I  +R +     DREVQRT+++LL ++DGF     I++IAATNR D+LDPA++R GR DR + +P P  EAR +IL+IH  KMT+  D++F++LA+ T+  +GA LKA+  EAGM A+R+D   V  EDF E + +V
Sbjct:  210 AKAVAHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETTGADREVQRTLMQLLAEMDGFDKRKNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPGIEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEAGMFAVRKDKALVEMEDFLEAVEKV 400          
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.929e-52
Identity = 100/192 (52.08%), Postives = 139/192 (72.40%), Query Frame = -2
Query:  172 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQ 747
            A+A A +TNA F+++ G +LVQ +IG+GA+LVR+ F LAK+K+P IIFIDEIDA+G  R ++  SGDREVQRT+++LL  +DGF +   +K+I ATNR DILD AL+R GR DR IE+P P EE R  IL++H+R +T+   VN  E+A  T+  NGA L+A+C+EAGM A+R +   +  EDF   I +V+
Sbjct:  229 AKAVAHETNAHFMRVVGSELVQKYIGEGARLVRELFDLAKKKAPTIIFIDEIDAVGASRTEANTSGDREVQRTLMQLLAGMDGFETRGDVKIIGATNRIDILDKALLRPGRFDRIIEIPLPDEEGRLSILKVHTRTLTMEETVNLPEIAGLTEGKNGADLRAICMEAGMYAIRNERPAITREDFLSAIEKVR 420          
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4)

HSP 1 Score: 204.912 bits (520), Expect = 3.826e-52
Identity = 103/196 (52.55%), Postives = 137/196 (69.90%), Query Frame = -2
Query:  160 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 747
            ARA A  T+  F++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +    GD EVQRTMLELLNQLDGF +   IK+I ATNR DILDPAL+R GR+DRKIE P PS  ARA IL+IHSRKM +   +N  ++A   +  +GA +K VC EAGM ALR     V  EDF   + +V  K +
Sbjct:  199 ARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVGKVMNKNQ 394          
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 3.826e-52
Identity = 106/194 (54.64%), Postives = 137/194 (70.62%), Query Frame = -2
Query:  166 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 747
            ARA A  T+ TF++++G +LVQ FIG+GA++VR+ F +A+E +P IIF+DEID+IG+ R +    GD EVQRTMLELLNQLDGF +   IKVI ATNR DILD AL+R GR+DRKIE P P+EEAR  IL+IHSRKM +   +N  ++A      +GA++K VC EAGM ALR     V  EDF   + +V  K
Sbjct:  195 ARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS-RLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQK 387          
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS7_PONAB (26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 204.527 bits (519), Expect = 4.996e-52
Identity = 106/204 (51.96%), Postives = 138/204 (67.65%), Query Frame = -2
Query:  145 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEG---IIQVQAKKKASLNY 747
            ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K  C+IF DEIDAIG  RFD    GD EVQRTMLEL+NQLDGF     IKV+ ATNR D LDPALMR GRLDRKIE   P  E R  IL+IH+R M+V  D+ FE LAR   +  GA++++VC EAGM A+R        +DF E    +I+  AK  A+  Y
Sbjct:  226 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429          
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.996e-52
Identity = 99/196 (50.51%), Postives = 138/196 (70.41%), Query Frame = -2
Query:  160 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 747
            ARA A+Q +  FLK+    +V  +IG+ A+L+R+ F  A++  PCIIF+DEIDAIG +RF    S DRE+QRT++ELLNQ+DGF +  R+K+I ATNR D LDPAL+R GRLDRKI +  P+E+AR  IL+IH+  +T H ++++E + + +D FNGA L+ VC EAGM A+R D   V  EDF + + +V   KK
Sbjct:  184 ARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKK 379          
The following BLAST results are available for this feature:
BLAST of CN185592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
PSMR_METMA5.902e-5350.79Proteasome-activating nucleotidase OS=Methanosarci... [more]
PRS8_SCHPO1.007e-5254.8726S protease regulatory subunit 8 homolog OS=Schiz... [more]
PRS4_YEAST1.007e-5252.3126S protease regulatory subunit 4 homolog OS=Sacch... [more]
PRS10_DICDI1.315e-5249.4926S protease regulatory subunit S10B OS=Dictyostel... [more]
PSMR_METAC1.717e-5250.79Proteasome-activating nucleotidase OS=Methanosarci... [more]
PSMR_METB62.929e-5252.08Proteasome-activating nucleotidase OS=Methanoregul... [more]
PRS8_YEAST3.826e-5252.5526S protease regulatory subunit 8 homolog OS=Sacch... [more]
PRS8_XENLA3.826e-5254.6426S protease regulatory subunit 8 OS=Xenopus laevi... [more]
PRS7_PONAB4.996e-5251.9626S protease regulatory subunit 7 OS=Pongo abelii ... [more]
PRS10_SPETR4.996e-5250.5126S protease regulatory subunit S10B OS=Spermophil... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185592 ID=CN185592; Name=CN185592; organism=Citrus sinensis; type=EST; length=751bp
TGGGAGTTTCACTTCTTATTATAACATATTATGTACAGTACAACGATTAT
GTTTAATACCCATTTTTTAATATTCAACCCAAAATATATTAATTACCAAT
TGAAGTAGAGGCTAAAACTTCGCCTTTGGATGTGTCTATGCATAGTAGTT
TAAGCTAGCCTTTTTCTTAGCCTGCACCTGAATGATACCTTCATTGAAAT
CCTCATGGTTGACCTCAGTCGCATCACGGCGAAGAGCAAGCATCCCTGCT
TCAACACAAACAGCTTTTAGTTGTGCCCCATTGAAATCGTCAGTGGATCG
AGCAAGTTCTTCGAAGTTGACATCCGGGTGAACAGTCATCTTCCTCGAAT
GGATTTGCAAAATGCGAGCTCTAGCTTCCTCACTCGGATGTGGTAACTCG
ATCTTGCGATCCAAACGGCCAGATCGCATAAGAGCAGGGTCCAGGATATC
AGCACGATTTGTTGCTGCTATGACCTTAATCCGATCATCGCTGCTAAATC
CATCGAGCTGATTGAGCAACTCTAACATAGTTCGCTGCACCTCCCTGTCT
CCACTCACTTCACTGTCAAACCGCTTTGTACCAATTGCGTCAATTTCGTC
GATGAAAATAATGCAGGGGGACTTCTCCTTTGCAAGTTGAAAGGCATCAC
GAACTAGTTTGGCTCCATCTCCAATGAACATCTGGACTAGTTGAGGGCCT
GCGAGCTTCAAAAAGGTAGCATTTGTTTGTGCTGCACAAGCACGAGCCCC
T
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