CN185592

Overview
NameCN185592
Unique NameCN185592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2137 contig Csv1_Contig2137:698..1448. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.996e-52
Identity = 99/196 (50.51%), Postives = 138/196 (70.41%), Query Frame = -2
Query:  160 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 747
            ARA A+Q +  FLK+    +V  +IG+ A+L+R+ F  A++  PCIIF+DEIDAIG +RF    S DRE+QRT++ELLNQ+DGF +  R+K+I ATNR D LDPAL+R GRLDRKI +  P+E+AR  IL+IH+  +T H ++++E + + +D FNGA L+ VC EAGM A+R D   V  EDF + + +V   KK
Sbjct:  184 ARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKK 379          
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS10_HUMAN (26S protease regulatory subunit S10B OS=Homo sapiens GN=PSMC6 PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.996e-52
Identity = 99/196 (50.51%), Postives = 138/196 (70.41%), Query Frame = -2
Query:  160 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 747
            ARA A+Q +  FLK+    +V  +IG+ A+L+R+ F  A++  PCIIF+DEIDAIG +RF    S DRE+QRT++ELLNQ+DGF +  R+K+I ATNR D LDPAL+R GRLDRKI +  P+E+AR  IL+IH+  +T H ++++E + + +D FNGA L+ VC EAGM A+R D   V  EDF + + +V   KK
Sbjct:  184 ARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKK 379          
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.113e-51
Identity = 103/195 (52.82%), Postives = 140/195 (71.79%), Query Frame = -2
Query:  166 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAK 747
            ARA A  T+ TF++++G +LVQ +IG+G+++VR+ F +A+E +P IIF+DEID+IG+ R +S    GD EVQRTMLELLNQLDGF S   IKV+  TNR DILDPAL+R GR+DRKIE P+P +  R  IL+IHSRKM +   +N ++++   +  +GA+LKAVC EAGM ALR     V+ EDF   + +V  K
Sbjct:  196 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAVSKVMKK 390          
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.113e-51
Identity = 105/204 (51.47%), Postives = 137/204 (67.16%), Query Frame = -2
Query:  145 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEG---IIQVQAKKKASLNY 747
            ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K  C+IF DEIDAIG  RFD    GD EVQRTMLEL+NQLDGF     IKV+ ATNR D LDPALMR GRLDRKIE   P  E R  I +IH+R M+V  D+ FE LAR   +  GA++++VC EAGM A+R        +DF E    +I+  AK  A+  Y
Sbjct:  226 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIKSYAKFSATPRY 429          
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.113e-51
Identity = 106/204 (51.96%), Postives = 137/204 (67.16%), Query Frame = -2
Query:  145 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGI---IQVQAKKKASLNY 747
            ARA A +T+A F+++ G +LVQ ++G+GA++VRD FQ+A+ K  CIIF DE+DAIG  RFD    GD EVQRTMLEL+NQLDGF     IKV+ ATNR D LDPAL+R GRLDRK+E   P  E RA I  IH++ M+   D+ FE LAR   +  GA +++VC EAGM A+R     V+ +DF E I   I+  AK  A+  Y
Sbjct:  221 ARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKDFLEAIDKVIKSYAKFSATSRY 424          
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.113e-51
Identity = 103/187 (55.08%), Postives = 135/187 (72.19%), Query Frame = -2
Query:  190 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDR-IKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNE 747
            A+A A QT+ATFL++ G +L+Q ++GDG +LVR  F  A+E SP I+FIDEIDAIGTKR+D++   +RE+QRTMLELLNQLDGF +  R IKVI ATNR   LDPAL+R GR+DRKI   +P E  + +I  IH+ KM +  DVN EEL +  DD +GA++KA+  EAG+LALR     V  +DF +
Sbjct:  242 AKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQ 428          
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS10_CAEEL (Probable 26S protease regulatory subunit S10B OS=Caenorhabditis elegans GN=rpt-4 PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.113e-51
Identity = 98/196 (50.00%), Postives = 139/196 (70.92%), Query Frame = -2
Query:  160 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKK 747
            ARA A+Q +  FLK+    +V  +IG+ A+++R+ F  A++  PCI+F+DEIDAIG +RF    S DRE+QRT++ELLNQLDGF S  ++KVI ATNR D LDPAL+R GRLDRKIE+  P+E++R  IL+IHS K+T H +++FE + + +D F+ A L+ VC EAGM A+R +   V  EDF + + +V   K+
Sbjct:  201 ARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKR 396          
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5)

HSP 1 Score: 202.986 bits (515), Expect = 1.454e-51
Identity = 105/204 (51.47%), Postives = 137/204 (67.16%), Query Frame = -2
Query:  145 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEG---IIQVQAKKKASLNY 747
            ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K  C+IF DEIDAIG  RFD    GD EVQRTMLEL+NQLDGF     IKV+ ATNR D LDPALMR GRLDRKIE   P  E R  I +IH+R M+V  D+ FE LAR   +  GA++++VC EAGM A+R        +DF E    +I+  AK  A+  Y
Sbjct:  226 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429          
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS7_MACFA (26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 202.986 bits (515), Expect = 1.454e-51
Identity = 105/204 (51.47%), Postives = 137/204 (67.16%), Query Frame = -2
Query:  145 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEG---IIQVQAKKKASLNY 747
            ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K  C+IF DEIDAIG  RFD    GD EVQRTMLEL+NQLDGF     IKV+ ATNR D LDPALMR GRLDRKIE   P  E R  I +IH+R M+V  D+ FE LAR   +  GA++++VC EAGM A+R        +DF E    +I+  AK  A+  Y
Sbjct:  226 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429          
BLAST of CN185592 vs. ExPASy Swiss-Prot
Match: PRS7_HUMAN (26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3)

HSP 1 Score: 202.986 bits (515), Expect = 1.454e-51
Identity = 105/204 (51.47%), Postives = 137/204 (67.16%), Query Frame = -2
Query:  145 ARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIELPHPSEEARARILQIHSRKMTVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEG---IIQVQAKKKASLNY 747
            ARA A +T+A F+++ G +LVQ ++G+GA++VR+ F++A+ K  C+IF DEIDAIG  RFD    GD EVQRTMLEL+NQLDGF     IKV+ ATNR D LDPALMR GRLDRKIE   P  E R  I +IH+R M+V  D+ FE LAR   +  GA++++VC EAGM A+R        +DF E    +I+  AK  A+  Y
Sbjct:  226 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRY 429          
The following BLAST results are available for this feature:
BLAST of CN185592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
PRS10_MOUSE4.996e-5250.5126S protease regulatory subunit S10B OS=Mus muscul... [more]
PRS10_HUMAN4.996e-5250.5126S protease regulatory subunit S10B OS=Homo sapie... [more]
PRS8_DICDI1.113e-5152.8226S protease regulatory subunit 8 OS=Dictyostelium... [more]
PRS7_XENLA1.113e-5151.4726S protease regulatory subunit 7 OS=Xenopus laevi... [more]
PRS7_DICDI1.113e-5151.9626S protease regulatory subunit 7 OS=Dictyostelium... [more]
PRS4_SCHPO1.113e-5155.0826S protease regulatory subunit 4 homolog OS=Schiz... [more]
PRS10_CAEEL1.113e-5150.00Probable 26S protease regulatory subunit S10B OS=C... [more]
PRS7_MOUSE1.454e-5151.4726S protease regulatory subunit 7 OS=Mus musculus ... [more]
PRS7_MACFA1.454e-5151.4726S protease regulatory subunit 7 OS=Macaca fascic... [more]
PRS7_HUMAN1.454e-5151.4726S protease regulatory subunit 7 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001J07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001J07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185592 ID=CN185592; Name=CN185592; organism=Citrus sinensis; type=EST; length=751bp
TGGGAGTTTCACTTCTTATTATAACATATTATGTACAGTACAACGATTAT
GTTTAATACCCATTTTTTAATATTCAACCCAAAATATATTAATTACCAAT
TGAAGTAGAGGCTAAAACTTCGCCTTTGGATGTGTCTATGCATAGTAGTT
TAAGCTAGCCTTTTTCTTAGCCTGCACCTGAATGATACCTTCATTGAAAT
CCTCATGGTTGACCTCAGTCGCATCACGGCGAAGAGCAAGCATCCCTGCT
TCAACACAAACAGCTTTTAGTTGTGCCCCATTGAAATCGTCAGTGGATCG
AGCAAGTTCTTCGAAGTTGACATCCGGGTGAACAGTCATCTTCCTCGAAT
GGATTTGCAAAATGCGAGCTCTAGCTTCCTCACTCGGATGTGGTAACTCG
ATCTTGCGATCCAAACGGCCAGATCGCATAAGAGCAGGGTCCAGGATATC
AGCACGATTTGTTGCTGCTATGACCTTAATCCGATCATCGCTGCTAAATC
CATCGAGCTGATTGAGCAACTCTAACATAGTTCGCTGCACCTCCCTGTCT
CCACTCACTTCACTGTCAAACCGCTTTGTACCAATTGCGTCAATTTCGTC
GATGAAAATAATGCAGGGGGACTTCTCCTTTGCAAGTTGAAAGGCATCAC
GAACTAGTTTGGCTCCATCTCCAATGAACATCTGGACTAGTTGAGGGCCT
GCGAGCTTCAAAAAGGTAGCATTTGTTTGTGCTGCACAAGCACGAGCCCC
T
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