CN185587
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_RHOP2 (30S ribosomal protein S5 OS=Rhodopseudomonas palustris (strain HaA2) GN=rpsE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.603e-11 Identity = 36/98 (36.73%), Postives = 56/98 (57.14%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDV 298 P A++KA E +NL V E T+ H I + +VYL AP TG+ AG ++ + G ++V +K +GS NP+N V+A F AL +++P+ V Sbjct: 69 PEAIRKATEAAKRNLTRVALREGRTLHHDIAGRHGAGRVYLRAAPAGTGIIAGGPMRAVFETLGIQDVVAKSIGSSNPYNMVRATFDALKHVDSPRSV 166
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSEHT (30S ribosomal protein S5 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=rpsE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.603e-11 Identity = 37/108 (34.26%), Postives = 63/108 (58.33%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ V+ + +T+ H ++ + ++V++ PA TG+ AG ++ +L + G +NV SK GS NP N V+A AL + +P+ + K G + E Sbjct: 59 PAAIQKAMEKARRNMINVDLNG-NTLQHPVKGRHAGSQVFMKPASEGTGIIAGGAMRAVLEVTGVQNVLSKCYGSTNPINVVRATISALENMNSPQSIAAKRGLRIDE 165
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_ENTS8 (30S ribosomal protein S5 OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=rpsE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.603e-11 Identity = 38/108 (35.19%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ V + T+ H ++ ++ ++V++ PA TG+ AG ++ +L +AG NV +K GS NP N V+A L +++P+ V K G++V E Sbjct: 57 PAAIQKAMEKARRNMINVALNHG-TLQHPVKGAHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLANMKSPEMVAAKRGKSVEE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_CHLPN (30S ribosomal protein S5 OS=Chlamydia pneumoniae GN=rpsE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.603e-11 Identity = 36/96 (37.50%), Postives = 55/96 (57.29%), Query Frame = 2 Query: 11 ALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDV 298 A++K E +NL +E E+ +I H + + ++ L PA TG+ AG ++ IL +AG K++ +K GS NP N VKA FKAL + KD+ Sbjct: 61 AIRKGGEAAKKNLMKIEALEDGSIPHEVLVHHDGAQLLLKPAKPGTGIVAGSRIRLILEMAGIKDIVAKSFGSNNPMNQVKAAFKALTGLSPRKDL 156
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_ACIAC (30S ribosomal protein S5 OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.603e-11 Identity = 39/106 (36.79%), Postives = 61/106 (57.55%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTV 322 P A+QKA E+C +NL V + +I H+++ + V L PAP TG+ AG ++ + + G ++ +K GS NP+N V+A F AL TP +V K G++V Sbjct: 63 PAAVQKAMEECRRNLVKVSL-KNGSIHHSVKGHHGAASVELHPAPKGTGIIAGGPMRAVFEVVGITDIVAKSHGSSNPYNMVRATFDALVNSTTPAEVAAKRGKSV 167
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_YERE8 (30S ribosomal protein S5 OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=rpsE PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 38/108 (35.19%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK + + V + T+ H ++ ++ ++V++ PA TG+ AG ++ +L +AG NV +K GS NP N V+A AL +++P+ V K G++V E Sbjct: 57 PAAIQKAMEKARRAMINVAL-DNGTLQHPVKGAHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIAALEDMKSPEMVAAKRGKSVEE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_RHOPT (30S ribosomal protein S5 OS=Rhodopseudomonas palustris (strain TIE-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 37/98 (37.76%), Postives = 55/98 (56.12%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDV 298 P A++KA E +NL V E T+ H I + +VYL AP TG+ AG ++ + G +V +K VGS NP+N V+A F AL +++P+ V Sbjct: 69 PEAIRKATESAKRNLTRVALREGRTLHHDIAGRHGAGRVYLRAAPAGTGIIAGGPMRAVFETLGIADVVAKSVGSSNPYNMVRATFDALKHLDSPRSV 166
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_RHOPA (30S ribosomal protein S5 OS=Rhodopseudomonas palustris GN=rpsE PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 37/98 (37.76%), Postives = 55/98 (56.12%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDV 298 P A++KA E +NL V E T+ H I + +VYL AP TG+ AG ++ + G +V +K VGS NP+N V+A F AL +++P+ V Sbjct: 69 PEAIRKATESAKRNLTRVALREGRTLHHDIAGRHGAGRVYLRAAPAGTGIIAGGPMRAVFETLGIADVVAKSVGSSNPYNMVRATFDALKHLDSPRSV 166
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_FRATW (30S ribosomal protein S5 OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=rpsE PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 36/108 (33.33%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V + + T+ + + +++ +KV++ PA TG+ AG ++++ G NV +K GS NP N V+A L I++P ++ EK G +V E Sbjct: 57 PAAIQKAMENAKKNMVSVNLNND-TLWYPVMSNHGASKVFMQPASAGTGIIAGGAMRSVFEAVGVHNVLAKTYGSTNPANVVRATIAGLAKIKSPDEIAEKRGLSVEE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_FRATT (30S ribosomal protein S5 OS=Francisella tularensis subsp. tularensis GN=rpsE PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.093e-11 Identity = 36/108 (33.33%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V + + T+ + + +++ +KV++ PA TG+ AG ++++ G NV +K GS NP N V+A L I++P ++ EK G +V E Sbjct: 57 PAAIQKAMENAKKNMVSVNLNND-TLWYPVMSNHGASKVFMQPASAGTGIIAGGAMRSVFEAVGVHNVLAKTYGSTNPANVVRATIAGLAKIKSPDEIAEKRGLSVEE 163 The following BLAST results are available for this feature:
BLAST of CN185587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185587 ID=CN185587; Name=CN185587; organism=Citrus sinensis; type=EST; length=681bpback to top |