CN185587
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_YERPA (30S ribosomal protein S5 OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 38/108 (35.19%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK + + V + T+ H ++ ++ ++V++ PA TG+ AG ++ +L +AG NV +K GS NP N V+A AL +++P+ V K G++V E Sbjct: 57 PAAIQKAMEKARRAMINVALNNG-TLQHPVKGAHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIAALEDMKSPEMVAAKRGKSVEE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_YERP3 (30S ribosomal protein S5 OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 38/108 (35.19%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK + + V + T+ H ++ ++ ++V++ PA TG+ AG ++ +L +AG NV +K GS NP N V+A AL +++P+ V K G++V E Sbjct: 57 PAAIQKAMEKARRAMINVALNNG-TLQHPVKGAHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIAALEDMKSPEMVAAKRGKSVEE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_XYLFT (30S ribosomal protein S5 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 35/106 (33.02%), Postives = 60/106 (56.60%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTV 322 P+A+QK+ E + + V + T+ H ++ ++ V++ PA TG+ AG ++ +L G KNV +K +GSRNP N V+A K L +++P + K G+ V Sbjct: 68 PVAIQKSMEYARKRMSNVSLNNG-TLWHPVKANHGAASVFMKPASEGTGVIAGGAMRAVLEAVGVKNVLAKAIGSRNPINLVRATLKGLEDMQSPTHIALKRGKNV 172
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_XYLF2 (30S ribosomal protein S5 OS=Xylella fastidiosa (strain M23) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 35/106 (33.02%), Postives = 60/106 (56.60%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTV 322 P+A+QK+ E + + V + T+ H ++ ++ V++ PA TG+ AG ++ +L G KNV +K +GSRNP N V+A K L +++P + K G+ V Sbjct: 68 PVAIQKSMEYARKRMSNVSLNNG-TLWHPVKANHGAASVFMKPASEGTGVIAGGAMRAVLEAVGVKNVLAKAIGSRNPINLVRATLKGLEDMQSPTHIALKRGKNV 172
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_WIGBR (30S ribosomal protein S5 OS=Wigglesworthia glossinidia brevipalpis GN=rpsE PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 37/106 (34.91%), Postives = 62/106 (58.49%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTV 322 P+A+QKA +K +N+ + + T+ H I + ++V++ PA TG+ AG ++ +L +AG NV +KV GS NP N V+A AL + P + EK G+++ Sbjct: 57 PLAIQKAMDKARKNMIIIPIVCK-TLQHEINGYHTGSRVFMKPASEGTGIIAGGAMRAVLEVAGVHNVLAKVYGSTNPINVVRATVNALKKMRFPMHIAEKRGKSI 161
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_SHISS (30S ribosomal protein S5 OS=Shigella sonnei (strain Ss046) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 38/108 (35.19%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ V + T+ H ++ + ++V++ PA TG+ AG ++ +L +AG NV +K GS NP N V+A L + +P+ V K G++V E Sbjct: 57 PAAIQKAMEKARRNMINVALNNG-TLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSVEE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_SHIFL (30S ribosomal protein S5 OS=Shigella flexneri GN=rpsE PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 38/108 (35.19%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ V + T+ H ++ + ++V++ PA TG+ AG ++ +L +AG NV +K GS NP N V+A L + +P+ V K G++V E Sbjct: 57 PAAIQKAMEKARRNMINVALNNG-TLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSVEE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_SHIF8 (30S ribosomal protein S5 OS=Shigella flexneri serotype 5b (strain 8401) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 38/108 (35.19%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ V + T+ H ++ + ++V++ PA TG+ AG ++ +L +AG NV +K GS NP N V+A L + +P+ V K G++V E Sbjct: 57 PAAIQKAMEKARRNMINVALNNG-TLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSVEE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_SHIBS (30S ribosomal protein S5 OS=Shigella boydii serotype 4 (strain Sb227) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 38/108 (35.19%), Postives = 62/108 (57.41%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ V + T+ H ++ + ++V++ PA TG+ AG ++ +L +AG NV +K GS NP N V+A L + +P+ V K G++V E Sbjct: 57 PAAIQKAMEKARRNMINVALNNG-TLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKSVEE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_SERP5 (30S ribosomal protein S5 OS=Serratia proteamaculans (strain 568) GN=rpsE PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.734e-11 Identity = 38/108 (35.19%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK + + V + T+ H ++ ++ ++V++ PA TG+ AG ++ +L +AG NV +K GS NP N V+A AL +++P+ V K G++V E Sbjct: 57 PAAIQKAMEKARRAMINVALNSG-TLQHPVKGAHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIAALEDMKSPEMVAAKRGKSVEE 163 The following BLAST results are available for this feature:
BLAST of CN185587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185587 ID=CN185587; Name=CN185587; organism=Citrus sinensis; type=EST; length=681bpback to top |