CN185587
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_LEGPC (30S ribosomal protein S5 OS=Legionella pneumophila (strain Corby) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.885e-14 Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 PIA+QKA ++ +N+ Y+ TI H I +Y +KV++ PA TG+ AG ++ +L + G +N+ +K +GS NP N V+A AL I TP V K G+TV E Sbjct: 58 PIAIQKAMDQAKKNMVYIPLSGT-TIFHEITWNYGASKVFMKPASEGTGIIAGGAMRAVLEVLGVQNILAKSIGSTNPSNIVRATIGALTHIGTPDYVAAKRGKTVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_LEGPA (30S ribosomal protein S5 OS=Legionella pneumophila (strain Paris) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.885e-14 Identity = 43/108 (39.81%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 PIA+QKA ++ +N+ Y+ TI H I +Y +KV++ PA TG+ AG ++ +L + G +N+ +K +GS NP N V+A AL I TP V K G+TV E Sbjct: 58 PIAIQKAMDQAKKNMVYIPLSGT-TIFHEITWNYGASKVFMKPASEGTGIIAGGAMRAVLEVLGVQNILAKSIGSTNPSNIVRATIGALTHIGTPDYVAAKRGKTVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_IDILO (30S ribosomal protein S5 OS=Idiomarina loihiensis GN=rpsE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.885e-14 Identity = 42/108 (38.89%), Postives = 65/108 (60.19%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ V+ + T+ H ++ + ++VY+ PA TG+ AG ++ +L ++G NV SK GS NP N V+A KALN +++P+ V K G V E Sbjct: 57 PAAIQKAMEKARRNMVTVQLKGD-TLQHPVKGRHSGSQVYMQPASEGTGIIAGGAMRAVLEVSGVHNVLSKAYGSTNPINVVRATIKALNGMKSPEQVAAKRGLRVDE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSEU5 (30S ribosomal protein S5 OS=Pseudomonas stutzeri (strain A1501) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14 Identity = 41/108 (37.96%), Postives = 66/108 (61.11%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V+ + T+ +A + ++ +K+Y+ PA TG+ AG ++ IL +AG NV +K GS NP N V A FK L A+++P+ + K G++V E Sbjct: 58 PAAIQKAMEAARRNMIQVDLNGT-TLQYATKAAHGASKIYMQPASEGTGVIAGGAMRAILEVAGVHNVLAKCYGSTNPVNVVHATFKGLKAMQSPESIAAKRGKSVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSEPW (30S ribosomal protein S5 OS=Pseudomonas putida (strain W619) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14 Identity = 41/108 (37.96%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V+ + T+ +A + ++ +KVY+ PA TG+ AG ++ +L +AG +NV +K GS NP N V A FK L A+++P+ + K G++V E Sbjct: 58 PAAIQKAMEAARRNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVYATFKGLKAMQSPESIAAKRGKSVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSEPK (30S ribosomal protein S5 OS=Pseudomonas putida (strain KT2440) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14 Identity = 41/108 (37.96%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V+ + T+ +A + ++ +KVY+ PA TG+ AG ++ +L +AG +NV +K GS NP N V A FK L A+++P+ + K G++V E Sbjct: 58 PAAIQKAMEAARRNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVYATFKGLKAMQSPESIAAKRGKSVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSEPG (30S ribosomal protein S5 OS=Pseudomonas putida (strain GB-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14 Identity = 41/108 (37.96%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V+ + T+ +A + ++ +KVY+ PA TG+ AG ++ +L +AG +NV +K GS NP N V A FK L A+++P+ + K G++V E Sbjct: 58 PAAIQKAMEAARRNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVYATFKGLKAMQSPESIAAKRGKSVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSEP1 (30S ribosomal protein S5 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14 Identity = 41/108 (37.96%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V+ + T+ +A + ++ +KVY+ PA TG+ AG ++ +L +AG +NV +K GS NP N V A FK L A+++P+ + K G++V E Sbjct: 58 PAAIQKAMEAARRNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVYATFKGLKAMQSPESIAAKRGKSVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PSEMY (30S ribosomal protein S5 OS=Pseudomonas mendocina (strain ymp) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14 Identity = 41/108 (37.96%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V+ + T+ + I++++ +KVY+ PA TG+ AG ++ +L +AG +NV +K GS NP N V A FK L +++P+ V K G++V E Sbjct: 58 PAAIQKAMEAARRNMIQVDLNGT-TLQYPIKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVHATFKGLKTMQSPESVAAKRGKSVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_ALCBS (30S ribosomal protein S5 OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 7.686e-14 Identity = 42/108 (38.89%), Postives = 65/108 (60.19%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ VE + TI H ++ + +KVY+ PA TG+ AG ++ +L +AG +NV +K GS NP N V+A F L ++ +P+ V K G++V E Sbjct: 58 PAAIQKALEAARRNMIQVELNGT-TIQHPMKARHGASKVYMQPADEGTGVIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVRATFNGLKSMASPESVAAKRGKSVDE 164 The following BLAST results are available for this feature:
BLAST of CN185587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185587 ID=CN185587; Name=CN185587; organism=Citrus sinensis; type=EST; length=681bpback to top |