CN185587
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_VIBVU (30S ribosomal protein S5 OS=Vibrio vulnificus GN=rpsE PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.982e-13 Identity = 42/106 (39.62%), Postives = 63/106 (59.43%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTV 322 P A+QKA EK +N+ + +E T+ H ++ + +KVY+ PA TG+ AG ++ +L +AG NV SK GS NP N V+A AL +++P+ V K G TV Sbjct: 58 PAAIQKAMEKARRNMVTIALNEG-TLHHPVKGRHSGSKVYMQPAAEGTGVIAGGAMRAVLEVAGVHNVLSKAYGSTNPINIVRATIDALVDVKSPEMVAAKRGLTV 162
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_PHOLL (30S ribosomal protein S5 OS=Photorhabdus luminescens subsp. laumondii GN=rpsE PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.982e-13 Identity = 39/108 (36.11%), Postives = 68/108 (62.96%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA EK +N+ V + T+ H ++ ++ ++V++ PA TG+ AG ++ +L +AG +NV +K GS NP N V+A AL+++++P+ V K G++V E Sbjct: 57 PAAIQKAMEKARRNMKTVALNSG-TLYHPVKGAHTGSRVFMQPAHEGTGIIAGGAMRAVLEVAGVRNVLAKTYGSTNPINVVRATLDALDSMKSPEMVAAKRGKSVEE 163
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_MARAV (30S ribosomal protein S5 OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=rpsE PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.982e-13 Identity = 39/106 (36.79%), Postives = 65/106 (61.32%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTV 322 P+A+QKA E +N+ V + T+ + ++ + +KV++ PA TG+ AG ++ +L +AG +NV SK GS NP N V++ K L A++ P+DV K G++V Sbjct: 57 PVAIQKAMEAARKNMVDVAL-DGTTLQYPVRAQHGGSKVFMQPASEGTGIIAGGAMRAVLEVAGVQNVLSKCYGSTNPVNVVRSTIKGLQAMKAPEDVAAKRGKSV 161
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_BLOFL (30S ribosomal protein S5 OS=Blochmannia floridanus GN=rpsE PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.982e-13 Identity = 41/112 (36.61%), Postives = 65/112 (58.04%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVEKYLL 340 P A+QKA EK N+ + + T+ H+I Y ++Y+ PA TG+ AG ++ IL + G NV +K GS NP N V+A AL +++P+ V EK G+++ +Y+L Sbjct: 60 PSAIQKAMEKARHNMIDIPLNPGRTLQHSIIGIYTGARIYMKPASEGTGIIAGGAMRAILEVVGIHNVLAKAYGSTNPINIVRATVNALKNMKSPEMVAEKRGKSL--EYIL 169
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RT05_MOUSE (28S ribosomal protein S5, mitochondrial OS=Mus musculus GN=Mrps5 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.507e-13 Identity = 39/106 (36.79%), Postives = 59/106 (55.66%), Query Frame = 2 Query: 11 ALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 A +KA + LHY+ER+E HTI H I +K+T++ + P G++ R + TI L G K++ ++V GS N N + LF L ET + + +K G VVE Sbjct: 269 AFRKAKNRAIHYLHYIERYEGHTIFHDISLRFKRTQIRMKKQPRGYGLRCHRAIITICRLIGIKDMYARVTGSMNMLNLTRGLFHGLARQETHQHLADKKGLHVVE 374
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RT05_BOVIN (28S ribosomal protein S5, mitochondrial OS=Bos taurus GN=MRPS5 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.507e-13 Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 2 Query: 11 ALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 A +KA + LHY+ER+E+HTI H I ++K+T + + P G++ R + TI L G K++ +KV GS N + + LF+ L+ ET + + +K VVE Sbjct: 267 AFRKAKNRAVHYLHYIERYEDHTIYHDISLTFKRTHIKMKKQPRGYGLRCHRAITTICRLIGIKDMYAKVSGSVNMLSLTRGLFQGLSRQETHQQLADKKSLHVVE 372
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_DICNV (30S ribosomal protein S5 OS=Dichelobacter nodosus (strain VCS1703A) GN=rpsE PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.507e-13 Identity = 37/108 (34.26%), Postives = 66/108 (61.11%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P+A+QKA ++ +NL + +++ T+ HAI + +V++ PA TG+ AG ++ + + G K+V +K G+RNP N ++A AL ++ TP+ V K G++V E Sbjct: 59 PVAIQKAMDQAKKNLVTIALNKD-TLQHAITGHHGAARVFMQPASEGTGIIAGGAMRAVFDVVGVKDVLAKCQGTRNPGNVIRATINALTSMATPEKVAAKRGKSVEE 165
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_AZOVD (30S ribosomal protein S5 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=rpsE PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.507e-13 Identity = 39/108 (36.11%), Postives = 66/108 (61.11%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P A+QKA E +N+ V+ T+ + +++++ ++VY+ PA TG+ AG ++ +L +AG +NV +K GS NP N V A FK L +++P+ V K G++V E Sbjct: 58 PAAIQKAMEAARRNMIQVDLSGT-TLQYPVKSAHGASRVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVYATFKGLKEMQSPESVAAKRGKSVEE 164
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RS5_METCA (30S ribosomal protein S5 OS=Methylococcus capsulatus GN=rpsE PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.498e-13 Identity = 38/108 (35.19%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 5 PIALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 P+A+QK+ E+ +N+ V + + T+ H + + KV++ PA TG+ AG ++ + + G NV +K +G+ NP N V+A K L A+ PK V K G TV E Sbjct: 60 PVAIQKSMEQARKNMRKVALNGQ-TLHHPVTAAAGAAKVHMQPASEGTGIIAGGAMRAVFEVVGVHNVLAKCIGTNNPINVVRATIKGLTALRDPKSVAAKRGMTVEE 166
BLAST of CN185587 vs. ExPASy Swiss-Prot
Match: RT05_PONAB (28S ribosomal protein S5, mitochondrial OS=Pongo abelii GN=MRPS5 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.110e-12 Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 2 Query: 11 ALQKAYEKCSQNLHYVERHEEHTIAHAIQTSYKKTKVYLWPAPTATGMKAGRTVQTILHLAGFKNVKSKVVGSRNPHNTVKALFKALNAIETPKDVEEKFGRTVVE 328 A +KA + +L+Y+ER+E+HTI H I +K+T + + P G++ R + TI L G K++ +KV GS N + + LF L+ ET + + +K G VVE Sbjct: 267 AFRKAKNRAVHHLYYIERYEDHTIFHDISLRFKRTHIKMKKQPKGYGLRCHRAIITICRLIGIKDMYAKVSGSTNMLSLTQGLFHGLSRQETHQQLADKKGLHVVE 372 The following BLAST results are available for this feature:
BLAST of CN185587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185587 ID=CN185587; Name=CN185587; organism=Citrus sinensis; type=EST; length=681bpback to top |