CN185582
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185582 vs. ExPASy Swiss-Prot
Match: RS27_BOVIN (40S ribosomal protein S27 OS=Bos taurus GN=RPS27 PE=3 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 3.209e-24 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = -2 Query: 159 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLRQPTGGRARLTEGCSFRRK 389 DLL+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VL QPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CN185582 vs. ExPASy Swiss-Prot
Match: RS27L_RAT (40S ribosomal protein S27-like protein OS=Rattus norvegicus GN=Rps27l PE=1 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 3.209e-24 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = -2 Query: 159 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLRQPTGGRARLTEGCSFRRK 389 DLL+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VL QPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CN185582 vs. ExPASy Swiss-Prot
Match: RS27L_MOUSE (40S ribosomal protein S27-like protein OS=Mus musculus GN=Rps27l PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 3.209e-24 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = -2 Query: 159 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLRQPTGGRARLTEGCSFRRK 389 DLL+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VL QPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CN185582 vs. ExPASy Swiss-Prot
Match: RS27L_HUMAN (40S ribosomal protein S27-like protein OS=Homo sapiens GN=RPS27L PE=1 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 3.209e-24 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = -2 Query: 159 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLRQPTGGRARLTEGCSFRRK 389 DLL+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VL QPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CN185582 vs. ExPASy Swiss-Prot
Match: RS27L_BOVIN (40S ribosomal protein S27-like protein OS=Bos taurus GN=RPS27L PE=3 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 3.209e-24 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = -2 Query: 159 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLRQPTGGRARLTEGCSFRRK 389 DLL+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VL QPTGG+ARLTEGCSFRRK Sbjct: 6 DLLHPSLDEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CN185582 vs. ExPASy Swiss-Prot
Match: RS27_NEUCR (40S ribosomal protein S27 OS=Neurospora crassa GN=rps-27 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.219e-23 Identity = 52/78 (66.67%), Postives = 58/78 (74.36%), Query Frame = -2 Query: 159 IDLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLRQPTGGRARLTEGCSFRRK 392 +DLLNP K LV +P SFFMDVKC GCF ITTVFSH+QTVV+C C +VL QPTGG+ARLTEGCSFRRK Sbjct: 5 VDLLNPSPASEARKHKLKTLVPAPRSFFMDVKCPGCFTITTVFSHAQTVVICQGCTTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CN185582 vs. ExPASy Swiss-Prot
Match: RS27_PONAB (40S ribosomal protein S27 OS=Pongo abelii GN=RPS27 PE=3 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 2.080e-23 Identity = 52/77 (67.53%), Postives = 59/77 (76.62%), Query Frame = -2 Query: 159 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLRQPTGGRARLTEGCSFRRK 389 D L+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VL QPTGG+ARLTEGCSFRRK Sbjct: 6 DPLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of CN185582 vs. ExPASy Swiss-Prot
Match: RS27_HOMAM (40S ribosomal protein S27 OS=Homarus americanus GN=RPS27 PE=3 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 3.003e-22 Identity = 49/77 (63.64%), Postives = 58/77 (75.32%), Query Frame = -2 Query: 159 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLRQPTGGRARLTEGCSFRRK 389 DLL+P KRLVQ PNS+FMDVKC GCF I+TVFSH+QTVV C C +VL QPTGG+A+LT+GCSFR+K Sbjct: 6 DLLHPSPSEEKRKCKLKRLVQHPNSYFMDVKCPGCFKISTVFSHAQTVVACVGCATVLCQPTGGKAKLTDGCSFRKK 82
BLAST of CN185582 vs. ExPASy Swiss-Prot
Match: RS27_CAEEL (40S ribosomal protein S27 OS=Caenorhabditis elegans GN=rps-27 PE=1 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 5.123e-22 Identity = 49/78 (62.82%), Postives = 58/78 (74.36%), Query Frame = -2 Query: 159 IDLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLRQPTGGRARLTEGCSFRRK 392 +DLL+P KRLVQ PNS+FMDVKC GCF I+TVFSH+ TVVVC C +VL QPT G+A+LTEGCSFR+K Sbjct: 5 VDLLHPEPQREIRCHKLKRLVQHPNSYFMDVKCSGCFKISTVFSHATTVVVCVGCNTVLCQPTRGKAKLTEGCSFRKK 82
BLAST of CN185582 vs. ExPASy Swiss-Prot
Match: RS27_DICDI (40S ribosomal protein S27 OS=Dictyostelium discoideum GN=rps27 PE=3 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 5.664e-21 Identity = 46/79 (58.23%), Postives = 55/79 (69.62%), Query Frame = -2 Query: 153 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLRQPTGGRARLTEGCSFRRKGD 389 DLL P KRLVQ+PNSFFMD+ C GC ITTVFSH+Q VV+C +C +V+ QPTGGRAR+T GC R+K D Sbjct: 7 DLLFPSIESEKRKHKLKRLVQAPNSFFMDINCHGCRTITTVFSHAQNVVICSSCSTVIAQPTGGRARITAGCRLRQKSD 85 The following BLAST results are available for this feature:
BLAST of CN185582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185582 ID=CN185582; Name=CN185582; organism=Citrus sinensis; type=EST; length=450bpback to top |