CN185567

Overview
NameCN185567
Unique NameCN185567
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185567 vs. ExPASy Swiss-Prot
Match: C85A1_ARATH (Cytochrome P450 85A1 OS=Arabidopsis thaliana GN=CYP85A1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.864e-16
Identity = 44/111 (39.64%), Postives = 60/111 (54.05%), Query Frame = -2
Query:  283 ANIISGVFRRAMTDINIKGCTIPKGGRVFASFRAVHLDHDLFKDARSFNPWRGQNNSGATSPVNVFTPLGGGPRPSPGYELARVELSVFFPHLVTRFSWVPAEQDKLVFFP 615
            A I++GV R+   D+ I G  IPKG R++   R ++ D +L++D   FNPWR    S      N     GGG R  PG EL  VE+S F  + VTR+ W     D+L+ FP
Sbjct:  342 ATIVNGVLRKTTRDLEINGYLIPKGWRIYVYTREINYDANLYEDPLIFNPWRWMKKS--LESQNSCFVFGGGTRLCPGKELGIVEISSFLHYFVTRYRWEEIGGDELMVFP 450          
BLAST of CN185567 vs. ExPASy Swiss-Prot
Match: C72B2_PINTA (Cytochrome P450 720B2 OS=Pinus taeda GN=CYP720B2 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.864e-16
Identity = 49/128 (38.28%), Postives = 64/128 (50.00%), Query Frame = -2
Query:  238 NIISGVFRRAMTDINIKG-CTIPKGGRVFASFRAVHLDHDLFKDARSFNPWRGQNNSGATSPVN--VFTPLGGGPRPSPGYELARVELSVFFPHLVTRFSWVPAEQDKLVFFPPTRTQKRYPIIVRGR 612
            N   GVFR    DI  KG   IP+G  V+      HLD      A  F+PWR Q +      +    F P GGG R  PG  LA++EL++F  + VT+F W   + DK+ +FP  R  K  PI +R R
Sbjct:  359 NFGPGVFRETKEDIKTKGGFVIPRGWTVYVFLTGTHLDEKYHSSALKFDPWRWQPHLQDQELLKNPSFMPFGGGARLCPGMHLAKMELALFLHNFVTKFRWEALQDDKISYFPFPRLIKGLPIRLRLR 486          
BLAST of CN185567 vs. ExPASy Swiss-Prot
Match: ABAH1_ARATH (Abscisic acid 8'-hydroxylase 1 OS=Arabidopsis thaliana GN=CYP707A1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.399e-15
Identity = 44/129 (34.11%), Postives = 67/129 (51.94%), Query Frame = -2
Query:  232 ANIISGVFRRAMTDINIKGCTIPKGGRVFASFRAVHLDHDLFKDARSFNPWRGQNNSGATSPVNVFTPLGGGPRPSPGYELARVELSVFFPHLVTRFSW-VPAEQDKLVFFPPTRTQKRYPIIVRGRNE 615
            A+I+S  FR A+ D+  +G  IPKG +V   FR +H   D+F +   F+P R +         N F P G G    PG ELA++E+S+   HL T++SW +    D + + P    Q   PI++  + E
Sbjct:  340 ASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSNPGKFDPSRFE----VAPKPNTFMPFGNGTHSCPGNELAKLEMSIMIHHLTTKYSWSIVGASDGIQYGPFALPQNGLPIVLARKPE 464          
BLAST of CN185567 vs. ExPASy Swiss-Prot
Match: T10H_TAXCU (Taxane 10-beta-hydroxylase OS=Taxus cuspidata GN=CYP725A1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.672e-14
Identity = 40/110 (36.36%), Postives = 62/110 (56.36%), Query Frame = -2
Query:  280 ISGVFRRAMTDINIKGCTIPKGGRVFASFRAVHLDHDLFKDARSFNPWRGQNNSGATSPVNVFTPLGGGPRPSPGYELARVELSVFFPHLVTRF-SWVPAEQDKLVFFPP 606
            + G+FR+A+TDI+  G TIPKG RV  S    HL  + F +   F P R ++     +P   + P GGG R  PG+E +++E+ +F  H V  F S++P + ++ V   P
Sbjct:  372 VFGIFRKAITDIHYDGYTIPKGWRVLCSPYTTHLREEYFPEPEEFRPSRFEDEGRHVTPY-TYVPFGGGLRTCPGWEFSKIEILLFVHHFVKNFSSYIPVDPNEKVLSDP 480          
BLAST of CN185567 vs. ExPASy Swiss-Prot
Match: C85A3_SOLLC (Cytochrome P450 85A3 OS=Solanum lycopersicum GN=CYP85A3 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.672e-14
Identity = 41/111 (36.94%), Postives = 60/111 (54.05%), Query Frame = -2
Query:  283 ANIISGVFRRAMTDINIKGCTIPKGGRVFASFRAVHLDHDLFKDARSFNPWRGQNNSGATSPVNVFTPLGGGPRPSPGYELARVELSVFFPHLVTRFSWVPAEQDKLVFFP 615
            A I++GV R+   D+ + G  IPKG R++   R ++ D  ++ D  +FNPWR   N+      + F   GGG R  PG EL   E+S F  + VTR+ W     +KL+ FP
Sbjct:  344 ATIVNGVLRKTTQDMELNGYMIPKGWRIYVYTRELNYDPLIYPDPYTFNPWRWLENN--LDHQSSFLMFGGGTRLCPGKELGVAEISTFLHYFVTRYRWEEVGGNKLMKFP 452          
BLAST of CN185567 vs. ExPASy Swiss-Prot
Match: ABAH3_ORYSJ (Abscisic acid 8'-hydroxylase 3 OS=Oryza sativa subsp. japonica GN=CYP707A7 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.183e-14
Identity = 43/112 (38.39%), Postives = 62/112 (55.36%), Query Frame = -2
Query:  283 ANIISGVFRRAMTDINIKGCTIPKGGRVFASFRAVHLDHDLFKDARSFNPWRGQNNSGATSPVNVFTPLGGGPRPSPGYELARVELSVFFPHLVTRFSW-VPAEQDKLVFFP 615
            A+IIS  FR A+ D+  KG  IPKG +V   FR +H + D F+D + F+P R +     +   N F P G G    PG ELA++E+ V   HLVT + W +    D++ + P
Sbjct:  355 ASIISFTFREAVADVEYKGFLIPKGWKVMPLFRNIHHNPDYFQDPQKFDPSRFK----VSPRPNTFMPFGNGVHACPGNELAKLEMLVLIHHLVTGYRWEIVGSSDEVEYSP 462          
BLAST of CN185567 vs. ExPASy Swiss-Prot
Match: ABAH3_ORYSI (Abscisic acid 8'-hydroxylase 3 OS=Oryza sativa subsp. indica GN=CYP707A7 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.183e-14
Identity = 43/112 (38.39%), Postives = 62/112 (55.36%), Query Frame = -2
Query:  283 ANIISGVFRRAMTDINIKGCTIPKGGRVFASFRAVHLDHDLFKDARSFNPWRGQNNSGATSPVNVFTPLGGGPRPSPGYELARVELSVFFPHLVTRFSW-VPAEQDKLVFFP 615
            A+IIS  FR A+ D+  KG  IPKG +V   FR +H + D F+D + F+P R +     +   N F P G G    PG ELA++E+ V   HLVT + W +    D++ + P
Sbjct:  355 ASIISFTFREAVADVEYKGFLIPKGWKVMPLFRNIHHNPDYFQDPQKFDPSRFK----VSPRPNTFMPFGNGVHACPGNELAKLEMLVLIHHLVTGYRWEIVGSSDEVEYSP 462          
BLAST of CN185567 vs. ExPASy Swiss-Prot
Match: ABAH3_ARATH (Abscisic acid 8'-hydroxylase 3 OS=Arabidopsis thaliana GN=CYP707A3 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.851e-14
Identity = 44/122 (36.07%), Postives = 62/122 (50.82%), Query Frame = -2
Query:  253 ANIISGVFRRAMTDINIKGCTIPKGGRVFASFRAVHLDHDLFKDARSFNPWRGQNNSGATSPVNVFTPLGGGPRPSPGYELARVELSVFFPHLVTRFSW-VPAEQDKLVFFPPTRTQKRYPI 615
            A I+S  FR A+ D+  +G  IPKG +V   FR +H + D+F D   F+P R +         N F P G G    PG ELA++E+SV   HL T++ W +    D + + P    Q   PI
Sbjct:  340 ATILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHNADIFSDPGKFDPSRFE----VAPKPNTFMPFGSGIHSCPGNELAKLEISVLIHHLTTKYRWSIVGPSDGIQYGPFALPQNGLPI 457          
BLAST of CN185567 vs. ExPASy Swiss-Prot
Match: C85A1_ORYSJ (Cytochrome P450 85A1 OS=Oryza sativa subsp. japonica GN=CYP85A1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.084e-13
Identity = 36/111 (32.43%), Postives = 60/111 (54.05%), Query Frame = -2
Query:  283 ANIISGVFRRAMTDINIKGCTIPKGGRVFASFRAVHLDHDLFKDARSFNPWRGQNNSGATSPVNVFTPLGGGPRPSPGYELARVELSVFFPHLVTRFSWVPAEQDKLVFFP 615
            A +++G+ R+   D+ + G  IPKG R++   R ++ D  L+ D  +FNPWR    +  + P   F   GGG R  PG E+  VE++ F  + VT++ W     + ++ FP
Sbjct:  346 ATVVNGLLRKTTQDVEMNGYVIPKGWRIYVYTREINYDPFLYPDPMTFNPWRWLEKNMESHP--HFMLFGGGSRMCPGKEVGTVEIATFLHYFVTQYRWEEEGNNTILKFP 454          
BLAST of CN185567 vs. ExPASy Swiss-Prot
Match: ABAH1_ORYSJ (Abscisic acid 8'-hydroxylase 1 OS=Oryza sativa subsp. japonica GN=CYP707A5 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.415e-13
Identity = 43/112 (38.39%), Postives = 61/112 (54.46%), Query Frame = -2
Query:  280 ANIISGVFRRAMTDINIKGCTIPKGGRVFASFRAVHLDHDLFKDARSFNPWRGQNNSGATSPVNVFTPLGGGPRPSPGYELARVELSVFFPHLVTRFSWVPAEQDKLVFFPP 615
            A+I+S  FR A+ D+  +G  IPKG +V   FR +H + D F     F+P R +    A  P N F P G G    PG ELA++E+ V F HL T++ W  ++ +  V F P
Sbjct:  344 ASILSFTFREAVEDVEYQGYLIPKGWKVLPLFRNIHHNPDHFPCPEKFDPSRFEV---APKP-NTFMPFGNGTHSCPGNELAKLEMLVLFHHLATKYRWSTSKSESGVQFGP 451          
The following BLAST results are available for this feature:
BLAST of CN185567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
C85A1_ARATH8.864e-1639.64Cytochrome P450 85A1 OS=Arabidopsis thaliana GN=CY... [more]
C72B2_PINTA8.864e-1638.28Cytochrome P450 720B2 OS=Pinus taeda GN=CYP720B2 P... [more]
ABAH1_ARATH4.399e-1534.11Abscisic acid 8'-hydroxylase 1 OS=Arabidopsis thal... [more]
T10H_TAXCU1.672e-1436.36Taxane 10-beta-hydroxylase OS=Taxus cuspidata GN=C... [more]
C85A3_SOLLC1.672e-1436.94Cytochrome P450 85A3 OS=Solanum lycopersicum GN=CY... [more]
ABAH3_ORYSJ2.183e-1438.39Abscisic acid 8'-hydroxylase 3 OS=Oryza sativa sub... [more]
ABAH3_ORYSI2.183e-1438.39Abscisic acid 8'-hydroxylase 3 OS=Oryza sativa sub... [more]
ABAH3_ARATH2.851e-1436.07Abscisic acid 8'-hydroxylase 3 OS=Arabidopsis thal... [more]
C85A1_ORYSJ1.084e-1332.43Cytochrome P450 85A1 OS=Oryza sativa subsp. japoni... [more]
ABAH1_ORYSJ1.415e-1338.39Abscisic acid 8'-hydroxylase 1 OS=Oryza sativa sub... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0001I17_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001I17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185567 ID=CN185567; Name=CN185567; organism=Citrus sinensis; type=EST; length=616bp
TTTTTTTTTTTTTTTTTAGGAAATAAAACCTTTACCATTAATCCTTACTA
CCGCAGCTTGATTAAAACCTATGAACATGATAATTTACATAAACTATTCT
GCTAACATAAAATTTATTAAATTTGACATAAATAGTTGATTACCTTAAAT
GATACATCATCTCCTCTAGCATTCTCTTACTCCATCCTTCCTTGCTTGCT
TCTCTCTTTATTCTTTACATGGCTTTTAATTCTCATTTCGACCCCGCACA
ATGATGGGGTACCTCTTCTGCGTTCTTGTTGGTGGAAAAAATACCAACTT
ATCTTGCTCAGCTGGGACCCAGCTGAAACGAGTAACTAAGTGGGGAAAAA
AAACAGAGAGCTCAACCCTCGCAAGTTCATATCCCGGGGACGGCCGGGGC
CCACCGCCCAAAGGAGTGAATACATTTACTGGACTCGTTGCTCCTGAATT
ATTCTGCCCTCTCCATGGGTTGAAAGAGCGAGCATCTTTGAAAAGGTCAT
GGTCTAAATGTACAGCCCTGAATGATGCAAAAACTCTCCCCCCCTTTGGT
ATAGTGCAACCCTTAATGTTGATATCTGTCATTGCTCTCCTGAAAACCCC
ACTGATTATGTTGGCC
back to top