CN185566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185566 vs. ExPASy Swiss-Prot
Match: ISPH_PROMA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus GN=ispH PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.124e-47 Identity = 86/163 (52.76%), Postives = 114/163 (69.94%), Query Frame = 1 Query: 250 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVW 738 D + F+ +L SD YNRRGF + + + + Y S++I +++NG+ G ++VKLAE++GFCWGVERAV +AYE R+ +P E IWITNEIIHNP+VN L M V+ I E+G K F V +GDVV+LPAFGA V EM L+ + I+DTTCPWVSKVW Sbjct: 2 DTQAFKRSLHHSDRYNRRGFESPAKRAQALEKAYQSNLIASIRDNGYLLEHGRLRVKLAEAFGFCWGVERAVAMAYETRRHYPTESIWITNEIIHNPSVNDHLRNMNVRFISAEKGIKDFSSVEEGDVVILPAFGATVHEMKLLHERGCHIIDTTCPWVSKVW 164
BLAST of CN185566 vs. ExPASy Swiss-Prot
Match: ISPH_SYNY3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=ispH PE=3 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 6.396e-44 Identity = 81/135 (60.00%), Postives = 105/135 (77.78%), Query Frame = 1 Query: 334 LMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVW 738 +MN EY S +I+++++N + G+V + LAE++GFCWGVERAV +AYE R+ FP +++WITNEIIHNP+VN+RL EM V I V G+K F V KGDVV+LPAFGA+VEEM LN++ IVDTTCPWVSKVW Sbjct: 3 VMNTEYQSHLIQEIRQNNYRLERGDVTILLAEAFGFCWGVERAVAMAYETRQHFPGDRLWITNEIIHNPSVNQRLREMEVNFIDVVNGEKDFSGVAKGDVVILPAFGASVEEMQLLNDRECTIVDTTCPWVSKVW 137
BLAST of CN185566 vs. ExPASy Swiss-Prot
Match: ISPH_GLOVI (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Gloeobacter violaceus GN=ispH PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 9.558e-40 Identity = 77/157 (49.04%), Postives = 107/157 (68.15%), Query Frame = 1 Query: 280 RSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEG----KKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKVW 738 +S NY R+GFG K E + + EY S +I +++ NG+ G V V+LAE++GFCWGV++AV +AYE + F ++WITNEIIHNP VN+ L M ++ + +E K F+ V++ DVV+LPAFGA+ +EM L+ KN IVDTTCPWVS VW Sbjct: 2 QSKNYFRKGFGLKAEVQDDLKAEYESSLIHEIRANGYTLRRGGVTVRLAEAFGFCWGVDKAVSMAYETHRMFAGRQLWITNEIIHNPLVNQHLRAMGIRFLDEDESGRRVPKDFERVSEKDVVILPAFGASTQEMQILDEKNCVIVDTTCPWVSAVW 158
BLAST of CN185566 vs. ExPASy Swiss-Prot
Match: ISPH_THETN (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermoanaerobacter tengcongensis GN=ispH PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.144e-15 Identity = 44/109 (40.37%), Postives = 69/109 (63.30%), Query Frame = 1 Query: 409 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKV 735 +++ +AE GFC+GV+RA++IAYE + + +++ EIIHNP V K LEE V+ I EE +K + KGD +++ + G + + L K V+I+D TCP+V KV Sbjct: 1 MEILIAEHAGFCFGVKRAIEIAYEELNKQKDTRLYTLGEIIHNPQVVKDLEEKGVRVIEEEELEK----LLKGDRLIIRSHGISKKLYEFLEQKGVEIIDVTCPFVKKV 105
BLAST of CN185566 vs. ExPASy Swiss-Prot
Match: ISPH_THEPX (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermoanaerobacter sp. (strain X514) GN=ispH PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13 Identity = 40/109 (36.70%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 409 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKV 735 +K+ +AE GFC+GV+RA++ AY+ ++ +KI+ EIIHNP V L + V I EE D + +GD +++ + G + + L K V+++D TCP+V KV Sbjct: 1 MKILIAEYAGFCFGVKRAIETAYQEIEKGDGKKIYTLGEIIHNPQVISDLSKKGVNVIEEEE----LDKLTEGDKLIIRSHGVSKKLYDFLAKKGVEVIDVTCPFVKKV 105
BLAST of CN185566 vs. ExPASy Swiss-Prot
Match: ISPH_THEP3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=ispH PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13 Identity = 40/109 (36.70%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 409 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKV 735 +K+ +AE GFC+GV+RA++ AY+ ++ +KI+ EIIHNP V L + V I EE D + +GD +++ + G + + L K V+++D TCP+V KV Sbjct: 1 MKILIAEYAGFCFGVKRAIETAYQEIEKGDGKKIYTLGEIIHNPQVISDLSKKGVNVIEEEE----LDKLTEGDKLIIRSHGVSKKLYDFLAKKGVEVIDVTCPFVKKV 105
BLAST of CN185566 vs. ExPASy Swiss-Prot
Match: ISPH_GEOSM (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Geobacter sp. (strain M21) GN=ispH PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.423e-13 Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = 1 Query: 409 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSK 732 ++V LA+ GFC+GV+RA Q+A+EA E + IIH+P V +RLEEM V IPVE+ + V G +++ + G A EE+ N+++VD TCP+V K Sbjct: 1 MQVILAKHAGFCFGVKRATQLAFEAADTGSET--YTLGPIIHSPQVVQRLEEMGV--IPVEDVSE----VETGGTIIIRSHGVAAEELEAAVRANLEVVDATCPFVKK 100
BLAST of CN185566 vs. ExPASy Swiss-Prot
Match: ISPH_PELCD (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ispH PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.699e-12 Identity = 40/108 (37.04%), Postives = 69/108 (63.89%), Query Frame = 1 Query: 409 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSK 732 +K+ LA+S GFC+GV+RA +A++A +QF E I IIH+P V K+LEE ++ I ++ + ++ G V++ + G EE+ ++++ ++IVD TCP+V K Sbjct: 1 MKIILADSAGFCFGVKRATNLAFDAAEQF--EHICSLGPIIHSPQVVKKLEEKGIKVI------RKVEDIDHG-AVIIRSHGITAEELDIIHDRELKIVDATCPFVKK 99
BLAST of CN185566 vs. ExPASy Swiss-Prot
Match: ISPH_PELPD (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Pelobacter propionicus (strain DSM 2379) GN=ispH PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.898e-12 Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = 1 Query: 409 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSK 732 ++V LA+ GFC+GV+RA Q+A+EA ++K + IIH+P V K+LEEM V+ + K D ++ G +++ + G A E+ K ++IVD TCP+V K Sbjct: 1 MRVILAKRAGFCFGVKRATQMAFEAAGM--DKKTYTLGPIIHSPQVVKKLEEMGVRAL------KDLDSMDSG-TIIIRSHGVASHEIAEAMQKKLEIVDATCPFVKK 99
BLAST of CN185566 vs. ExPASy Swiss-Prot
Match: ISPH_CLOTE (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Clostridium tetani GN=ispH PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.898e-12 Identity = 34/109 (31.19%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 409 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKV 735 + + LA+ GFC+GV+RAV + ++ +P++ I+ +IHN V L+ + +I G + D + +GD+++L + G +E + L K + I+D TCP+VS + Sbjct: 1 MSIILAKKSGFCYGVKRAVDTCLKIKQNYPDKIIYTLGPLIHNNDVVDFLKTKNIFSI----GYENIDTLKEGDIIILRSHGVTLETIQKLKEKKLNIIDATCPYVSNI 105 The following BLAST results are available for this feature:
BLAST of CN185566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185566 ID=CN185566; Name=CN185566; organism=Citrus sinensis; type=EST; length=743bpback to top |