CN185566
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185566 vs. ExPASy Swiss-Prot
Match: ISPH_GEOBB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=ispH PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.785e-12 Identity = 42/108 (38.89%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 409 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSK 732 ++V LA+ GFC+GV+RA Q+A++A E + IIH+P V +RLEEM V IPV+ + V G +++ + G A EE+ N+++VD TCP+V K Sbjct: 1 MQVILAKHAGFCFGVKRATQLAFQAANIGSET--YTLGPIIHSPQVVQRLEEMGV--IPVDNVSE----VETGGTIIIRSHGVAAEELEAAVRANLEVVDATCPFVKK 100
BLAST of CN185566 vs. ExPASy Swiss-Prot
Match: ISPH_CLOAB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Clostridium acetobutylicum GN=ispH PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.438e-11 Identity = 38/108 (35.19%), Postives = 67/108 (62.04%), Query Frame = 1 Query: 412 KVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKV 735 KV LAE GFC+GV+RAV +A +K++ +KI+ E+IHN V +L++ V I +E+ D + + DV+++ + G + E L +K + +++ TCP+V+K+ Sbjct: 3 KVMLAEKAGFCFGVKRAVDMALLTQKEY-NKKIYTLGELIHNNDVVDKLKDNNVYPIGIED----IDNLKENDVILIRSHGISEEIYKILLSKGLTVINATCPFVTKI 105
BLAST of CN185566 vs. ExPASy Swiss-Prot
Match: ISPH_GEOLS (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=ispH PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.878e-11 Identity = 41/108 (37.96%), Postives = 63/108 (58.33%), Query Frame = 1 Query: 409 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSK 732 +KV LA+ GFC+GV+RA Q+A+EA + ++K + IIH+P V +LEEM V + K V+ G V++ + G EM + K +++VD TCP+V K Sbjct: 1 MKVILAKRAGFCFGVKRATQMAFEAAGK--DQKTFTLGPIIHSPQVVNKLEEMGVGVV------KDLSGVSNG-TVIIRSHGVLASEMDEAHQKQLEVVDATCPFVKK 99
BLAST of CN185566 vs. ExPASy Swiss-Prot
Match: ISPH_AQUAE (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Aquifex aeolicus GN=ispH PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.185e-11 Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 1 Query: 409 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSKV 735 V + +AE GFC+GV+RAV++A E+ K+ + K++ IIHNP RL+ + V EE K+ GD V++ + G E+ L K ++++D TCP+V V Sbjct: 2 VDIIIAEHAGFCFGVKRAVKLAEESLKE-SQGKVYTLGPIIHNPQEVNRLKNLGVFPSQGEEFKE-------GDTVIIRSHGIPPEKEEALRKKGLKVIDATCPYVKAV 102
BLAST of CN185566 vs. ExPASy Swiss-Prot
Match: ISPH_GEOMG (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=ispH PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 40/108 (37.04%), Postives = 63/108 (58.33%), Query Frame = 1 Query: 409 VKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNKNVQIVDTTCPWVSK 732 +++ LA+ GFC+GV+RA Q+A+EA ++ E K + IIH+P V RLEEM V+ + K + G ++V + G EE+ K +++VD TCP+V K Sbjct: 1 MEIILAKRAGFCFGVKRATQMAFEAAEK--EGKTYSLGPIIHSPQVVHRLEEMGVKVL------KGLGEITDGTIIV-RSHGVTSEELEEAVRKELEVVDATCPFVKK 99 The following BLAST results are available for this feature:
BLAST of CN185566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185566 ID=CN185566; Name=CN185566; organism=Citrus sinensis; type=EST; length=743bpback to top |