CN185565

Overview
NameCN185565
Unique NameCN185565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185565 vs. ExPASy Swiss-Prot
Match: COG6_DICDI (Conserved oligomeric Golgi complex subunit 6 OS=Dictyostelium discoideum GN=cog6 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.293e-25
Identity = 70/242 (28.93%), Postives = 123/242 (50.83%), Query Frame = 3
Query:   51 LSRKLKKVLESRTETPDLLASLKTLSTFYEENTPHARRNLRSTIEKRALSINLDFXXXXXXXXXXXXXVEEEVNSLAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEINALRDEDLDESFFKALAHVQEIHANCKV-LLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGE----------------LLKTAVRCLKERPVLF 725
            LSRK++KVL+ + ++ DL  +L+ LSTFY  N+  ARRNLR+ IEKR L IN+ F             +  +   +   C  I   LNS N  +  +++    L   L    +++  +  F + ++L+ +E  +L  +++D SF++ L  + EI   CK  LL   +Q+   E+++++  +Q+ AY RL +W + E ++L   E P +                  +L  A+  L+ +P+LF
Sbjct:    5 LSRKIQKVLDIKLDSEDLSNALEELSTFYTSNSIGARRNLRNEIEKRYLDINIQFLDQFDQLNKNINELVLDFEGIKNSCVDICDHLNSTNRVSSELLKNAHELSCGLKEIKEKENTLQQFFKKFKLTPQEEQSLVKKEIDSSFYQTLDRLSEIQNECKKNLLSNQYQKPTYEILEIITKHQDNAYRRLYQWTKEEIKQLLIIEIPILDSFNNIDQQQQQQQQKVMMLPIALSALQNKPLLF 246          
BLAST of CN185565 vs. ExPASy Swiss-Prot
Match: COG6_ASPNC (Conserved oligomeric Golgi complex subunit 6 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=cog6 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.415e-24
Identity = 65/227 (28.63%), Postives = 115/227 (50.66%), Query Frame = 3
Query:   51 LSRKLKKVLESRTETPDLLASLKTLSTFYEENTPHARRNLRSTIEKRALSINLDFXXXXXXXXXXXXXVEEEVNSLAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEINALR--DEDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVLF 725
            LS +L  VL +     D+  +L+TLS     NT   RR LR  ++K  +  N +              +   + +L + CD + K + S    T  ++E    L +       +QE++  F + + + +E++  L   +E +D+ FF+ LA V++++ +C+ LL   ++R GLELM+  +     AY++L RW+Q E R L + E+P +   ++  +R L ERP LF
Sbjct:   38 LSNRLTSVLSASYADSDIRDALETLSLRGIHNTAEVRRQLRLDVQKEVVDSNAEIVRDFGLVAEQLKRIGTVITNLNQTCDEMRKHIVSARQETTPVLEEASALMKQRKEAETKQELLEAFTQHFIVPDEDLLILTHAEEPIDDHFFEILARVKQVYRDCEALLGGENERLGLELMEKSSRSLNSAYQKLYRWIQKEFRSL-NLEDPRISSSIRRVLRVLAERPSLF 263          
BLAST of CN185565 vs. ExPASy Swiss-Prot
Match: COG6_COCIM (Conserved oligomeric Golgi complex subunit 6 OS=Coccidioides immitis GN=COG6 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.258e-22
Identity = 64/227 (28.19%), Postives = 111/227 (48.90%), Query Frame = 3
Query:   51 LSRKLKKVLESRTETPDLLASLKTLSTFYEENTPHARRNLRSTIEKRALSINLDFXXXXXXXXXXXXXVEEEVNSLAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEINALRD--EDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVLF 725
            L  +L  VL +    PD+  SL+TL     +NT   RR LR  I+K  +  N                +   ++ L   C+ + + + S    T  ++E    L         +Q ++  F + + LS+++I+ L    E +D+ FF+ L+  + IH +C+VLL   +QR GLE+M+  +     A+ +L +W+Q E  K  + E+P++G  ++  +R L ERP LF
Sbjct:   13 LFNRLNAVLSTSYTDPDIRDSLETLDKRGLQNTAETRRTLRLDIQKEVIDSNGSIIQDFGKVAEQLSRIGAAISHLNTICEDMRQHITSARQETEPVLEEAAALLSQKQEVETKQHLLDAFNKHFVLSSDDISILTSTAEPVDDRFFQILSRQKRIHKDCEVLLGGENQRLGLEIMEQSSKNLNSAFMKLYKWIQKEF-KSSNLEDPQMGSSIRKGLRVLAERPTLF 238          
BLAST of CN185565 vs. ExPASy Swiss-Prot
Match: COG6_NEOFI (Conserved oligomeric Golgi complex subunit 6 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=cog6 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.464e-21
Identity = 65/227 (28.63%), Postives = 112/227 (49.34%), Query Frame = 3
Query:   51 LSRKLKKVLESRTETPDLLASLKTLSTFYEENTPHARRNLRSTIEKRALSINLDFXXXXXXXXXXXXXVEEEVNSLAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEINALR--DEDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVLF 725
            LS +L  VL +     D+  +L+TLS     NT   RR LR  ++K  +  N +                  V    +  + I +A       T  +IE    L      +  +Q+++  F++ + +S++++  L   +E +D+ FF  L  V+++H +C+VLL   +QR GLELM+  +     AY++L RW+Q E + L + E+P +   ++ A+R L ERP LF
Sbjct:   36 LSNRLTSVLSASYADSDIRDALETLSLRGVHNTAETRRQLRLDVQKEVVECNAEI-----------------VRDFGKVAEHIVRAKQD----TAPVIEEASALMNQKKESETKQQLLDAFVKHFVVSDDDLLVLTSAEEPIDDRFFDVLDRVKQVHHDCEVLLGGENQRLGLELMEKSSRNLNSAYQKLFRWIQKEFKSL-NLEDPRISSSIRRALRVLAERPSLF 240          
BLAST of CN185565 vs. ExPASy Swiss-Prot
Match: COG6_CHAGB (Conserved oligomeric Golgi complex subunit 6 OS=Chaetomium globosum GN=COG6 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.049e-19
Identity = 68/243 (27.98%), Postives = 113/243 (46.50%), Query Frame = 3
Query:    9 QSVRGESEMAL--APGLSRKLKKVLESRTETPDLLASLKTLSTFYEENTPHARRNLRSTIEKRALSINLDFXXXXXXXXXXXXXVEEEVNSLAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEINALR--DEDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVLF 725
            QS    S +A   A  LS K+  VL S     +   +L  L     +NT   RR LR  ++K  +  N +              +   +  L E  + ++  + S   TT + +    +L        Q+Q ++  F  ++ LS +E  AL    E +D+ FF  LA  + I  +C++LL   +Q  GLE+M+  +      +++L +WVQ E + L + ENP++G  ++ A+R L ERP LF
Sbjct:   11 QSTTATSSLAAKAANPLSSKVTTVLSSSYADTEFREALALLDERGVQNTAETRRQLRLDLQKEVIDSNGEIIDEFAKVAEQLRRIGTTIGRLNETFNEMKTQIGSAQKTTSSTLIEASQLMIQRRQVEQKQALLGAFNTNFVLSEDETAALTLTSEPVDDLFFAVLAKAKRISKDCEILLGFENQTLGLEIMEQTSKNLNLGFQKLYKWVQREFKTL-NLENPQIGSSIRHALRVLAERPSLF 252          
BLAST of CN185565 vs. ExPASy Swiss-Prot
Match: COG6_NEUCR (Conserved oligomeric Golgi complex subunit 6 OS=Neurospora crassa GN=cog-6 PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.160e-18
Identity = 59/227 (25.99%), Postives = 109/227 (48.02%), Query Frame = 3
Query:   51 LSRKLKKVLESRTETPDLLASLKTLSTFYEENTPHARRNLRSTIEKRALSINLDFXXXXXXXXXXXXXVEEEVNSLAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEINALR--DEDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVLF 725
            LS K+  VL +     +   +L  L     +N    RR LR  ++K  +  N +              +   +  L E  + +   +++ +A+T + +    +L         +Q+++S F   + L+ +E++AL    E +D+ FF  LA  ++I  +C+VLL    Q  GL +M+ +       +++L RW+Q E + L + ENP++G  ++ A+R L ERP LF
Sbjct:   44 LSSKIASVLSTSYADTEFREALFLLDERGLQNVAENRRKLRLDLQKEVIDSNGEIIHEFGKVAEQLKRIGYTIGKLNESYNDMRTQIHAAHASTASTLGEASQLMTQKRQIESKQKLLSTFKTHFILTQDEVDALTLTSEPVDDLFFTVLAKAKKISRDCEVLLGFEDQTLGLGIMEQVTRNLNHGFQKLYRWIQREFKSL-NLENPQIGSAIRRALRVLAERPTLF 269          
BLAST of CN185565 vs. ExPASy Swiss-Prot
Match: COG6_SCLS1 (Conserved oligomeric Golgi complex subunit 6 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=COG6 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.978e-18
Identity = 67/252 (26.59%), Postives = 114/252 (45.24%), Query Frame = 3
Query:    3 RGQSVRGESEMALAPG---------LSRKLKKVLESRTETPDLLASLKTLSTFYEENTPHARRNLRSTIEKRALSINLDFXXXXXXXXXXXXXVEEEVNSLAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEINALRD--EDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVLF 725
            R QS  G S+ A +PG         LS K+  VL +     D+  +L  L     +NT   RR LR  + +  +  N D                                        G++ E    L +  +    +QE+++ F   + +S+++I  L    E +++ FF  L+  ++I  +C++LL T +QR GLE+M+  +    GA+++L RW+Q E + L + ENP++   ++ A+R L ERP LF
Sbjct:    8 RKQSYSGFSDGADSPGSPLASRTNPLSSKVTSVLSASYADSDIRDALSLLDKRGIQNTAETRRQLRLDVHREVIESNGDIIREF-----------------------------------GHVAEEASELMKQQEQMQAKQELLNAFNAHFVMSDDDIAMLTSTAEPVNDRFFSILSRAKKIQNDCEILLGTENQRLGLEIMEQTSKNINGAFQKLYRWIQREFKTL-NLENPQISSSIRRALRVLAERPSLF 223          
BLAST of CN185565 vs. ExPASy Swiss-Prot
Match: COG6_MAGGR (Conserved oligomeric Golgi complex subunit 6 OS=Magnaporthe grisea GN=COG6 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.408e-18
Identity = 64/231 (27.71%), Postives = 114/231 (49.35%), Query Frame = 3
Query:   51 LSRKLKKVLESRTETPDLLASLKTLSTFYEENTPHARRNLRSTIEKRALSINLD----FXXXXXXXXXXXXXVEEEVNSLAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEIN--ALRDEDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVLF 725
            LS K+  VL +     +   +L  L +   +NT  ARR LR  + +  +  N +    F             +E+  NS AE   ++ KA + C +       T    KR +++   +Q ++  F   + L  +E+    L  E +D+ FF  LA  + I  +C++LL   +Q +GL++M+  +   + A+++L RW+Q E + L + E+P++G  ++ A+R L ERP LF
Sbjct:   34 LSSKVTSVLSTSYADSEFRDALSLLDSRGIQNTAEARRRLRLDLHREVIDSNGEIIDEFGRVADQLRRIGNTLEKLNNSYAEMKTQVTKA-HECTSPVLQEASTLIAQKRQVEI---KQRLLKSFSGHFLLPEDEVAILTLTSEPVDDRFFNVLAKARRIRKDCEILLGFENQTSGLQIMEQTSRNLDLAFQKLYRWIQREFKTL-NLESPQLGSAIRRALRALAERPSLF 259          
BLAST of CN185565 vs. ExPASy Swiss-Prot
Match: COG6_AJECN (Conserved oligomeric Golgi complex subunit 6 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=COG6 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.365e-17
Identity = 45/155 (29.03%), Postives = 89/155 (57.42%), Query Frame = 3
Query:  267 VNSLAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEINALRD--EDLDESFFKALAHVQEIHANCKVLLRTHHQRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVLF 725
            +++L   C+ + + +      T  + E    L         +++I+  F   + LS +E+++L    + +D+ FF ALA +++IH +C+VLL + +QR GL++M+  +    GA+++L +W+Q E + L + E+P++   ++ A+R L ERP LF
Sbjct:   18 ISNLTNVCEEMRRHIVLATQETAPLFEEAAILMSQQQEVETKEKILDAFNNHFILSEDELSSLTSSAKPVDDLFFDALARMKQIHKDCEVLLGSENQRLGLDIMEQSSKNLNGAFQKLYKWIQKEFKSL-NLEDPQISLSIRRALRVLAERPSLF 171          
BLAST of CN185565 vs. ExPASy Swiss-Prot
Match: COG6_CRYNE (Conserved oligomeric Golgi complex subunit 6 OS=Cryptococcus neoformans GN=COG6 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.388e-16
Identity = 59/230 (25.65%), Postives = 106/230 (46.09%), Query Frame = 3
Query:   45 PGLSRKLKKVLESRTETPDLLASLKTLSTFYEENTPHARRNLRSTIEKRALSINLDFXXXXXXXXXXXXXVEEEVNSLAECCDRIEKALNSCNATTGNIIETTERLKRDLDVNTQRQEIVSCFLRDYQLSNEEINAL--RDEDLDESFFKALAHVQEIHANCKVLLRTHH--QRAGLELMDMMAMYQEGAYERLCRWVQAECRKLGDTENPEVGELLKTAVRCLKERPVL 722
            P    K +   E   E  D L   +TL     ++   AR+ L+  IE    + +  F             + E +  +   CD+++  L+  N+ T  ++E  + L+   D    R  +++ FL  + LSN E+ AL  R+  + +  F AL HV++I  +C+VLL       +AGL++M + +   E  Y ++ R+ Q E R+       E   +++ A+  L++RP L
Sbjct:   51 PKAKVKAQPEYEELEEDDDTLPKRRTLKG---QSAAIARKYLKQDIETCLATGSTKFLEAFAEVDQKLNVLREHMQEMQVRCDQVQSELDQANSGTKFLLERADVLRSQRDSAQLRAHLITLFLSRFTLSNSELTALTSREVTIGQPLFDALDHVEKIRTDCEVLLSGEEGKAQAGLDIMSLTSEQLESGYSKIHRYCQFEFRQFTREAQLEASSVMRQAICRLRDRPAL 277          
The following BLAST results are available for this feature:
BLAST of CN185565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
COG6_DICDI8.293e-2528.93Conserved oligomeric Golgi complex subunit 6 OS=Di... [more]
COG6_ASPNC1.415e-2428.63Conserved oligomeric Golgi complex subunit 6 OS=As... [more]
COG6_COCIM2.258e-2228.19Conserved oligomeric Golgi complex subunit 6 OS=Co... [more]
COG6_NEOFI1.464e-2128.63Conserved oligomeric Golgi complex subunit 6 OS=Ne... [more]
COG6_CHAGB1.049e-1927.98Conserved oligomeric Golgi complex subunit 6 OS=Ch... [more]
COG6_NEUCR1.160e-1825.99Conserved oligomeric Golgi complex subunit 6 OS=Ne... [more]
COG6_SCLS11.978e-1826.59Conserved oligomeric Golgi complex subunit 6 OS=Sc... [more]
COG6_MAGGR4.408e-1827.71Conserved oligomeric Golgi complex subunit 6 OS=Ma... [more]
COG6_AJECN6.365e-1729.03Conserved oligomeric Golgi complex subunit 6 OS=Aj... [more]
COG6_CRYNE5.388e-1625.65Conserved oligomeric Golgi complex subunit 6 OS=Cr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001I15_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001I15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185565 ID=CN185565; Name=CN185565; organism=Citrus sinensis; type=EST; length=727bp
GCAGGGGCCAGTCTGTTCGGGGAGAATCGGAAATGGCATTAGCGCCGGGG
CTTTCACGGAAGCTGAAGAAAGTACTAGAATCAAGAACAGAAACTCCCGA
TCTGCTAGCTTCGCTCAAAACGCTTTCTACTTTCTACGAAGAAAACACTC
CACACGCGCGTCGCAACCTCAGATCCACCATCGAAAAGCGCGCACTCTCC
ATCAATCTCGATTTCCTCCAAGCCTCAAGCGCCGCTCAACAAGCTCTGGA
TCAAGTTGAAGAGGAGGTTAATTCGCTCGCTGAATGCTGTGACAGGATTG
AGAAGGCATTGAATAGTTGTAATGCTACCACTGGTAATATTATCGAAACC
ACAGAGAGGCTCAAGCGGGACCTTGATGTGAATACACAGAGACAAGAGAT
TGTTTCATGCTTTCTTCGTGATTATCAGCTCTCTAATGAAGAGATAAATG
CACTGAGAGACGAAGACCTAGATGAAAGTTTCTTTAAGGCGCTTGCACAT
GTTCAAGAAATTCACGCCAACTGCAAAGTTCTGTTAAGGACACATCACCA
GCGTGCAGGTTTGGAGCTGATGGATATGATGGCTATGTACCAAGAAGGAG
CCTATGAGCGCCTTTGCAGGTGGGTTCAGGCAGAGTGTAGGAAACTGGGT
GACACTGAGAATCCTGAAGTTGGTGAACTTTTGAAAACAGCAGTTCGATG
CCTCAAGGAGAGGCCTGTCCTTTTCAA
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