CN185553
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF4A_AJECN (ATP-dependent RNA helicase eIF4A OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=TIF1 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.841e-23 Identity = 54/126 (42.86%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 304 GLRSPLLFSKGELFPSARDVRSFSRLSLELGKQQLSALEFCSNLIMVLSKCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681 G P + + P + ++ GK ++ + L CQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GG SVRED + LQ G QV VGTPGRV DM++R+ L+ D++K Sbjct: 44 GFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQKVDTNLKACQALILAPTRELAQQIQKVVVAIGDFMSIECHACIGGISVREDMKALQDGPQVVVGTPGRVHDMIQRRVLKTDHMK 169 HSP 2 Score: 103.605 bits (257), Expect = 1.001e-21 Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGL 446 ++YDE+ DSFDAM LR LLRG+YAYGFE+PSAIQQR I+P KG +VI QAQSGTGKTATF LQ++D L Sbjct: 18 SNYDEITDSFDAMNLRAELLRGVYAYGFERPSAIQQRAIMPVIKGSDVIAQAQSGTGKTATFSISALQKVDTNL 91
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF4A_NEOFI (ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif1 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.405e-23 Identity = 55/126 (43.65%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 304 GLRSPLLFSKGELFPSARDVRSFSRLSLELGKQQLSALEFCSNLIMVLSKCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681 G P + + P + ++ GK ++ L + CQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VRED + LQ G QV VGTPGRV DM++R+ LR D +K Sbjct: 44 GFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTNVREDMKALQEGPQVVVGTPGRVQDMIQRRVLRTDNLK 169 HSP 2 Score: 102.064 bits (253), Expect = 2.914e-21 Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLD 437 ++YDE+ DSFD+M L+ LLRGIYAYGFE+PSAIQQR I+P KG +VI QAQSGTGKTATF LQ+LD Sbjct: 18 SNYDEITDSFDSMELKPELLRGIYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQKLD 88
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF4A_ASPFU (ATP-dependent RNA helicase eIF4A OS=Aspergillus fumigatus GN=tif1 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.405e-23 Identity = 55/126 (43.65%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 304 GLRSPLLFSKGELFPSARDVRSFSRLSLELGKQQLSALEFCSNLIMVLSKCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681 G P + + P + ++ GK ++ L + CQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VRED + LQ G QV VGTPGRV DM++R+ LR D +K Sbjct: 44 GFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTNVREDMKALQEGPQVVVGTPGRVQDMIQRRVLRTDNLK 169 HSP 2 Score: 103.219 bits (256), Expect = 1.308e-21 Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLD 437 ++YDE+ DSFDAM L+ LLRG+YAYGFE+PSAIQQR I+P KG +VI QAQSGTGKTATF LQ+LD Sbjct: 18 SNYDEITDSFDAMDLKPELLRGVYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQKLD 88
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF4A_ASPCL (ATP-dependent RNA helicase eIF4A OS=Aspergillus clavatus GN=tif1 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.405e-23 Identity = 55/126 (43.65%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 304 GLRSPLLFSKGELFPSARDVRSFSRLSLELGKQQLSALEFCSNLIMVLSKCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681 G P + + P + ++ GK ++ + L CQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VRED + LQ G QV VGTPGRV DM++R+ LR D +K Sbjct: 44 GFERPSAIQQRAIMPIIKGSDVIAQAQSGTGKTATFSISALQKIDPNLKACQALILAPTRELAQQIQKVVVAIGDFMSLECHACIGGTNVREDMKALQDGPQVVVGTPGRVQDMIQRRVLRTDQMK 169 HSP 2 Score: 101.679 bits (252), Expect = 3.806e-21 Identity = 49/74 (66.22%), Postives = 59/74 (79.73%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGL 446 ++YDE+ DSFD+M L+ LLRGIYAYGFE+PSAIQQR I+P KG +VI QAQSGTGKTATF LQ++D L Sbjct: 18 SNYDEITDSFDSMDLKPELLRGIYAYGFERPSAIQQRAIMPIIKGSDVIAQAQSGTGKTATFSISALQKIDPNL 91
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF4A_PHANO (ATP-dependent RNA helicase eIF4A OS=Phaeosphaeria nodorum GN=TIF1 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.141e-23 Identity = 54/126 (42.86%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 304 GLRSPLLFSKGELFPSARDVRSFSRLSLELGKQQLSALEFCSNLIMVLSKCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681 G P + + P + ++ GK ++ + + CQAL+LAPTRELAQQI+KV+ A+GD++ V HAC+GGTSVR+D + LQ G QV VGTPGRV DM++R+ L+ D++K Sbjct: 42 GFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISTLQKIDSNVKACQALILAPTRELAQQIQKVVVAIGDFMDVACHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRVLKTDHMK 167 HSP 2 Score: 101.293 bits (251), Expect = 4.970e-21 Identity = 48/71 (67.61%), Postives = 57/71 (80.28%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLD 437 ++YDE DSFDAM L+ LLRG+YAYGFE+PSAIQQR I+P KG +VI QAQSGTGKTATF LQ++D Sbjct: 16 SNYDETTDSFDAMNLKAELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISTLQKID 86
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF4A_MAGGR (ATP-dependent RNA helicase eIF4A OS=Magnaporthe grisea GN=TIF1 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.141e-23 Identity = 53/126 (42.06%), Postives = 79/126 (62.70%), Query Frame = 1 Query: 304 GLRSPLLFSKGELFPSARDVRSFSRLSLELGKQQLSALEFCSNLIMVLSKCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681 G P + + P + ++ GK ++ + + +CQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GGTSVR+D + LQ G QV VGTPGRV DM++R+ L+ D +K Sbjct: 42 GFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKIDTNVKQCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDGMK 167 HSP 2 Score: 102.834 bits (255), Expect = 1.708e-21 Identity = 49/76 (64.47%), Postives = 59/76 (77.63%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452 ++YDE DSFD M L+ LLRGIYAYGFE+PSAIQQR I+P KG +VI QAQSGTGKTATF +LQ++D + Q Sbjct: 16 SNYDETVDSFDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKIDTNVKQ 91
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: DHH1_CHAGB (ATP-dependent RNA helicase DHH1 OS=Chaetomium globosum GN=DHH1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.859e-23 Identity = 34/71 (47.89%), Postives = 46/71 (64.79%), Query Frame = 1 Query: 445 LSKCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQ 657 +SK Q L+L PTRELA Q +V + LG +LG+ V GGT +R+D LQ V + VGTPGR+ D+ +Q Sbjct: 77 VSKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTGLRDDIVRLQDPVHIVVGTPGRILDLAGKQ 147 HSP 2 Score: 58.151 bits (139), Expect = 4.859e-23 Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 3 Query: 252 FDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLD 437 F+ GL+ +LL GI+ GFEKPS IQ+ I GR+++ +A++GTGKTA F L++++ Sbjct: 13 FEDFGLKRDLLMGIFEAGFEKPSPIQEESIPVALVGRDILARAKNGTGKTAAFVIPALEKIN 74
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF4A_SCHPO (ATP-dependent RNA helicase eIF4A OS=Schizosaccharomyces pombe GN=tif1 PE=1 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.357e-23 Identity = 55/126 (43.65%), Postives = 77/126 (61.11%), Query Frame = 1 Query: 304 GLRSPLLFSKGELFPSARDVRSFSRLSLELGKQQLSALEFCSNLIMVLSKCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQSLRPDYIK 681 G P + + P + ++ GK ++ + L +CQAL+LAPTRELAQQI+KV+ ALGD + V+ HAC+GGT VR+D LQAGV V VGTPGRV DM++R++L D ++ Sbjct: 38 GFERPSAIQQRAIMPILGERDVLAQAQSGTGKTATFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDDMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQ 163 HSP 2 Score: 100.908 bits (250), Expect = 6.491e-21 Identity = 49/76 (64.47%), Postives = 59/76 (77.63%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGLVQ 452 T+YDEV D+FD M L+ LLRGIYAYGFE+PSAIQQR I+P R+V+ QAQSGTGKTATF +LQ++D L Q Sbjct: 12 TNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGKTATFSISVLQKIDTSLKQ 87
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: IF4A2_CHICK (Eukaryotic initiation factor 4A-II OS=Gallus gallus GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.357e-23 Identity = 58/127 (45.67%), Postives = 76/127 (59.84%), Query Frame = 1 Query: 304 GLRSPLLFSKGELFPSARDVRSFSRLSLELGKQQLSALEFCSNLIMVLSKCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQA-GVQVAVGTPGRVFDMLRRQSLRPDYIK 681 G P + + P + ++ GK A+ L + L + QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR + + LQA + VGTPGRVFDML R+ L P +IK Sbjct: 52 GFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIK 178 HSP 2 Score: 103.219 bits (256), Expect = 1.308e-21 Identity = 50/74 (67.57%), Postives = 61/74 (82.43%), Query Frame = 3 Query: 225 TSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQLDYGL 446 ++++E+ D+FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG +VI QAQSGTGKTATF ILQQL+ L Sbjct: 26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDL 99
BLAST of CN185553 vs. ExPASy Swiss-Prot
Match: DHH1_DEBHA (ATP-dependent RNA helicase DHH1 OS=Debaryomyces hansenii GN=DHH1 PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 8.224e-23 Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = 1 Query: 445 LSKCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVQVAVGTPGRVFDMLRRQ 657 ++K QAL+L PTRELA Q +V+R LG +LG++ GGTS+R+D L V V VGTPGRV D+ R+ Sbjct: 96 VNKIQALILVPTRELALQTSQVVRTLGKHLGLQCMVTTGGTSLRDDILRLNDPVHVLVGTPGRVLDLASRK 166 HSP 2 Score: 57.7658 bits (138), Expect = 8.224e-23 Identity = 34/89 (38.20%), Postives = 51/89 (57.30%), Query Frame = 3 Query: 171 QYDT--QMNELLSTDGQDFFTSYDEVYDSFDAMGLRENLLRGIYAYGFEKPSAIQQRGIVPFCKGREVIQQAQSGTGKTATFCSGILQQ 431 Q DT Q ++L+T G+ +F+ L+ LL GI+ GFEKPS +Q+ I GR+++ +A++GTGKTA+F LQQ Sbjct: 14 QKDTRPQTEDVLNTKGK-----------TFEDFPLKRELLMGIFEAGFEKPSPVQEESIPMALAGRDILARAKNGTGKTASFVIPCLQQ 91 The following BLAST results are available for this feature:
BLAST of CN185553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 478
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185553 ID=CN185553; Name=CN185553; organism=Citrus sinensis; type=EST; length=682bpback to top |