CN185546

Overview
NameCN185546
Unique NameCN185546
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10630 contig Csv1_Contig10630:554..1313. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: YQ51_CAEEL (Uncharacterized mitochondrial carrier C16C10.1 OS=Caenorhabditis elegans GN=C16C10.1 PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 44/162 (27.16%), Postives = 75/162 (46.30%), Query Frame = -2
Query:  274 VTPFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIM 759
            V+P E+++ ++Q +R      L Y    H  R  +  +G+   + G  PT++R+       +   + F   L ++   D        S +SG  AG    + T PFDV+KT    +  G  +   K +   I+ +Y   G+ A   GL+PRL+++ P  AIM
Sbjct:  192 VSPIEMIRTKMQSKR------LTYHEIGHLVRSSMATKGISSFYLGWTPTMLRDIPFSGIYWAGYDLFKTNLQRRQGPDHNPFVV--SFVSGAAAGVVASIFTHPFDVIKTNCQIRIGGSIDDMNKSITTVIKDMYHSRGISAFSSGLVPRLVKVSPSCAIM 345          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: YMC1_YEAST (Carrier protein YMC1, mitochondrial OS=Saccharomyces cerevisiae GN=YMC1 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 48/165 (29.09%), Postives = 79/165 (47.88%), Query Frame = -2
Query:  268 TPFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKHEG-DGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAI-RTIYAEEGLLALWKGLLPRLMRIPPGQAIMWA 756
            +P E V+IRLQ Q G      ++KGP+ C + +   + L     G  PT++R G      F    A       K  G + K +  W+  I G L+GTA  +   P DV+K+  + Q+    + K+   + ++ +T+YA  G+ A +KG  P ++R  P     +A
Sbjct:  139 SPIEHVRIRLQTQTGSGTNA-EFKGPLECIKKLRHNKALL---RGLTPTILREGHGCGTYFLVYEALIANQMNKRRGLERKDIPAWKLCIFGALSGTALWLMVYPLDVIKS--VMQTDNLQKPKFGNSISSVAKTLYANGGIGAFFKGFGPTMLRAAPANGATFA 297          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: UCP3_BOVIN (Mitochondrial uncoupling protein 3 OS=Bos taurus GN=UCP3 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 45/158 (28.48%), Postives = 69/158 (43.67%), Query Frame = -2
Query:  298 PFEVVKIRLQ----QQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGG--GELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMR 753
            P +  K+RLQ     Q  L+    +Y+G +     ++R EG   L++G    + R  +  +      ++       K      ++     +++G   G     C  P DVVK R  A    G  G  KY G + A RTI  EEG+  LWKG+LP + R
Sbjct:   33 PLDTAKVRLQIQGENQAALAARSAQYRGVLGTILTMVRTEGPRSLYSGLVAGLQRQMSFASIRIGLYDSVKQFYTPKGSDHSSIIT---RILAGCTTGAMAVTCAQPTDVVKIRFQASMHTGLGGNRKYSGTMDAYRTIAREEGVRGLWKGILPNITR 187          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: TPC_BOVIN (Mitochondrial thiamine pyrophosphate carrier OS=Bos taurus GN=SLC25A19 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 51/177 (28.81%), Postives = 78/177 (44.07%), Query Frame = -2
Query:  238 VTPFEVVKIRLQQQ---RGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQVTGFYE 759
            ++P +V+KIR Q Q      S    KY G +   R I++EEG    W G  P  + +    A  F +  A   L+ +    D +        + G L+     +   P DV++TR  AQ   G    YK +  A+ T+Y  EG L  +KGL P L+ I P     +++   +   YE
Sbjct:   33 ISPLDVIKIRFQLQIERLSRSDPNAKYHGILQAGRQILQEEGPTAFWKGHIPAQLLSIGYGAVQFLSFEALTELVHRASVRDARDFSV--HFLCGGLSACVATLAVHPVDVLRTRFAAQ---GEPRVYKTLRDAVVTMYRTEGPLVFYKGLNPTLIAIFPYAGFQFSIYSSLKRAYE 204          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: S2545_HUMAN (Solute carrier family 25 member 45 OS=Homo sapiens GN=SLC25A45 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 47/165 (28.48%), Postives = 80/165 (48.48%), Query Frame = -2
Query:  277 VTPFEVVKIRLQQQRGLSLEL----LKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAI 759
            + PF+++K+RLQ Q     +      +Y+GP+HCA  I REEG  GL+ GA    +R+       F         L +++  +G+       +++G  AG A  V   P D++K+R+  Q  G     Y+GM+  + +   +EGL   ++G+     R  P  A+
Sbjct:  117 LAPFDLIKVRLQNQTEPRAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEG----LCRQYTPEGQNPSSATVLVAGGFAGIASWVAATPLDMIKSRM--QMDGLRRRVYQGMLDCMVSSIRQEGLGVFFRGVTINSARAFPVNAV 275          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: S2534_RAT (Solute carrier family 25 member 34 OS=Rattus norvegicus GN=Slc25a34 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 49/169 (28.99%), Postives = 80/169 (47.34%), Query Frame = -2
Query:  268 PFEVVKIRLQQQRGLSLELL---KYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRG----GGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWA 753
            P EVVK RLQ Q  L         Y+G +     + R +GL+GL  G A  ++  G      F   +             G   QP  ++++G +AG  G     P  +VKT+L AQ+      G + +++G++ A+ TI+ ++G+L LW+G+   + R+  G A   A
Sbjct:   40 PLEVVKTRLQLQGELQAPGTYPRPYRGFVSSVTAVARADGLWGLQKGLAAGLLYQGLMNGVRFYCYSLACQA--------GLTQQPGGTVVAGAVAGALGAFVGSPAYLVKTQLQAQTGAAVAVGHQHQHQGVLSALETIWRQQGMLGLWRGVGAAVPRVTVGSAAQLA 200          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: KMCP1_MOUSE (Kidney mitochondrial carrier protein 1 OS=Mus musculus GN=Slc25a30 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.460e-11
Identity = 42/149 (28.19%), Postives = 72/149 (48.32%), Query Frame = -2
Query:  316 PFEVVKIRLQ---QQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGL 753
            P ++ K RLQ   Q    +   ++Y+G +H    I REEGL  L++G AP ++R  +          +   L  ++ E +  ++    +++ G L+G        P DV+K R+ AQ+         GM+ +  +IY +EG   LWKG+
Sbjct:   25 PIDLTKTRLQIQGQTNDANFREIRYRGMLHALMRIGREEGLKALYSGIAPAMLRQASYGTIKIGTYQSLKRLAVERPEDETLLV----NVVCGILSGVISSAIANPTDVLKIRMQAQN----SAVQGGMIDSFMSIYQQEGTRGLWKGV 165          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: UCP1_RABIT (Mitochondrial brown fat uncoupling protein 1 OS=Oryctolagus cuniculus GN=UCP1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.743e-11
Identity = 49/170 (28.82%), Postives = 77/170 (45.29%), Query Frame = -2
Query:  247 PFEVVKIRLQQQRGLSLELLKYKGPIHCARMIIREEGLFGLWAGAAPTVMRNG-TNQAAMFTAKNAFDVLLWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQVTG 753
            P EVVK+RLQ Q  L     +Y G  +  R+I   E L  LW G  P ++RN   N   + T       L+  +   D          +S  +AG    + + P DVVKTR +    G    +Y  + +   T++ +EG  A +KG +P  +R+     IM+   +++ G
Sbjct:  132 PTEVVKVRLQAQSHLHGLKPRYTGTYNAYRIIATTESLTSLWKGTTPNLLRNVIINCTELVTYDLMKGALVRNEILADDVPCH----FVSALIAGFCTTLLSSPVDVVKTRFINSPPG----QYASVPNCAMTMFTKEGPTAFFKGFVPSFLRLGSWNVIMFVCFEKLKG 293          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: TPC1_ASPFU (Mitochondrial thiamine pyrophosphate carrier 1 OS=Aspergillus fumigatus GN=tpc1 PE=3 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 9.743e-11
Identity = 56/178 (31.46%), Postives = 82/178 (46.07%), Query Frame = -2
Query:  253 VTPFEVVKIRLQQQ-RGLSLELLK-------YKGPIHCARMIIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVLLWKKHEGDGKVLQP-WQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQV 759
            V P +VVKIRLQ Q   LS            YKG +   R II++EG+ GLW G  P  +      A  FTA      +L    + D   L P  +S +SG +AG      T P D+++TR  AQ   G E  Y  ++ ++R I   EG    ++G    + +I P   + +A  + +
Sbjct:   32 VAPLDVVKIRLQLQIHSLSDPASHHDVVGPIYKGTLSTMRTIIKQEGITGLWKGNIPAELMYVCYGALQFTAYRTTTQIL---AQLDPHRLPPALESFVSGAVAGGLATASTYPLDLLRTRFAAQ---GTERIYTSLLASVRDIARSEGPAGFFRGCSAAVGQIVPYMGLFFATYESL 203          
BLAST of CN185546 vs. ExPASy Swiss-Prot
Match: SAMC_MOUSE (S-adenosylmethionine mitochondrial carrier protein OS=Mus musculus GN=Slc25a26 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.743e-11
Identity = 43/136 (31.62%), Postives = 64/136 (47.06%), Query Frame = -2
Query:  256 IIREEGLFGLWAGAAPTVMRNGTNQAAMFTAKNAFDVL-LWKKHEGDGKVLQPWQSMISGFLAGTAGPVCTGPFDVVKTRLMAQSRGGGELKYKGMVHAIRTIYAEEGLLALWKGLLPRLMRIPPGQAIMWAVADQ 660
            I+ EEG+ GL+ G   TV+R        F    +   L  W++    G V+  WQS + G  AG      T P DV KTR+M  ++ G       ++ A+  ++  +GL  L+ G+LPR+  I  G  I     DQ
Sbjct:  131 ILSEEGIQGLYRGYKSTVLREIPFSLVQFPLWESLKALWAWRR----GHVVDSWQSAVCGAFAGGFAAAVTTPLDVAKTRIML-AKAGSSTAVGNVLSAMHGVWRSQGLAGLFAGVLPRMAAISMGGFIFLGAYDQ 261          
The following BLAST results are available for this feature:
BLAST of CN185546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
YQ51_CAEEL7.460e-1127.16Uncharacterized mitochondrial carrier C16C10.1 OS=... [more]
YMC1_YEAST7.460e-1129.09Carrier protein YMC1, mitochondrial OS=Saccharomyc... [more]
UCP3_BOVIN7.460e-1128.48Mitochondrial uncoupling protein 3 OS=Bos taurus G... [more]
TPC_BOVIN7.460e-1128.81Mitochondrial thiamine pyrophosphate carrier OS=Bo... [more]
S2545_HUMAN7.460e-1128.48Solute carrier family 25 member 45 OS=Homo sapiens... [more]
S2534_RAT7.460e-1128.99Solute carrier family 25 member 34 OS=Rattus norve... [more]
KMCP1_MOUSE7.460e-1128.19Kidney mitochondrial carrier protein 1 OS=Mus musc... [more]
UCP1_RABIT9.743e-1128.82Mitochondrial brown fat uncoupling protein 1 OS=Or... [more]
TPC1_ASPFU9.743e-1131.46Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
SAMC_MOUSE9.743e-1131.62S-adenosylmethionine mitochondrial carrier protein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001I04_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001I04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185546 ID=CN185546; Name=CN185546; organism=Citrus sinensis; type=EST; length=760bp
TTTTTTTTTTTTTTGAGAAAATCTGGCAACTACCTACATTTTCCCCTTCC
TAGGCATGGCAAATTACTGATTCGGTCTACAAAAACTGGTGTTCAATCAA
AGAATCCTTAAGAACTCAAAAAGAAATGCTGAAGCAATTCATAGCTTCAT
GCTAGCAATGGAAGTATGTAACTAAAATGTAGAATAGGCAAAACAATAAA
ATAGTACCTATAAGGGTGCATTGCGAAGATATCTCCTCTCATAAAAACCA
GTCACTTGGTCAGCCACAGCCCACATAATGGCCTGGCCTGGCGGGATCCT
CATGAGACGGGGCAGCAGTCCTTTCCACAAGGCAAGAAGCCCCTCCTCAG
CATATATTGTTCTGATTGCATGGACCATGCCTTTGTACTTTAACTCACCC
CCACCTCGACTCTGGGCCATCAGCCTTGTCTTGACAACATCAAAAGGGCC
AGTGCATACTGGACCTGCTGTTCCTGCAAGGAATCCCGATATCATGGACT
GCCACGGTTGGAGGACCTTCCCATCACCTTCATGTTTCTTCCACAAGAGT
ACATCAAAAGCATTTTTAGCCGTAAACATGGCAGCTTGGTTTGTCCCATT
GCGCATAACAGTTGGGGCAGCCCCTGCCCAGAGTCCAAAGAGTCCTTCCT
CACGGATGATCATACGAGCACAGTGTATAGGACCCTTGTACTTTAGAAGC
TCAAGACTCAAACCTCTCTGCTGTTGTAGTCTAATTTTCACCACCTCAAA
AGGAGTAACA
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