CN185542

Overview
NameCN185542
Unique NameCN185542
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG_THEMA (3-oxoacyl-[acyl-carrier-protein] reductase OS=Thermotoga maritima GN=fabG PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.874e-19
Identity = 56/166 (33.73%), Postives = 87/166 (52.41%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 711
            G++++L+NN G T     V    ED+  ++  N +  +N+ Q+  P +      SIV +SSV G +      + Y A+K  +  + +  A E A  NIR N+V P F+ TP+TE     E   +    R P+ R GKP E++ ++ FL    +SY+TGQ I  DGG
Sbjct:   81 GRIDVLVNNAGITRDALLVRMKEEDWDAVINVNLKGVFNVTQMVVPYMIKQRNGSIVNVSSVVG-IYGNPGQTNYAASKAGVIGMTKTWAKELAGRNIRVNAVAPGFIETPMTEKL--PEKARETALSRIPLGRFGKPEEVAQVILFLASDESSYVTGQVIGIDGG 243          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: BACC_BACSU (Bacilysin biosynthesis oxidoreductase bacC OS=Bacillus subtilis GN=bacC PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.448e-19
Identity = 62/175 (35.43%), Postives = 98/175 (56.00%), Query Frame = -2
Query:  205 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTE-SFL-NDEAFLKEVEGR----TPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFPA 711
            G L++LINN G  I     E    D++ ++  N    + + + A   + A+G  +I+   SV G V+  D  + Y A+KG +  L + +A ++A+  IR N V P  + TPL E SFL N+E  L+E++       P+ R GKP EI++++ FL    +SY+TG  I+ADGG+ A
Sbjct:   79 GGLDVLINNAGIEIVAPIHEMELSDWNKVLQVNLTGMFLMSKHALKHMLAAGKGNIINTCSVGGLVAWPDIPA-YNASKGGVLQLTKSMAVDYAKHQIRVNCVCPGIIDTPLNEKSFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADGGYTA 252          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: ARDH_CANTR (D-arabinitol 2-dehydrogenase [ribulose-forming] OS=Candida tropicalis GN=ARD PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.448e-19
Identity = 57/168 (33.93%), Postives = 93/168 (55.36%), Query Frame = -2
Query:  211 NILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQ-LAHPLLKASGAASIVLMSSVCGG-VSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLK-EVEGRTPMRRTGKPNEISSLVAFLCM-PAASYITGQTISADGGF 702
            ++LIN  G        EY A++   +M  N   ++ + Q  A PL++ +   SI+L+ S+ G  V+      +Y  +K  + HLAR LACEWA+ NIR N+++P ++ TPLT + ++    +K E E + PM+R  +P E    + +L    A+SY TG  +  DGG+
Sbjct:  112 SVLINTAGYAENFPAEEYPAKNAENIMKVNGLGSFYVSQAFARPLIQNNMTGSIILIGSMSGTIVNDPQPQCMYNMSKAGVIHLARSLACEWAKYNIRVNTLSPGYILTPLTRNVISGHTEMKTEWESKIPMKRMAEPKEFVGSILYLASDSASSYTTGHNLVVDGGY 279          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: SOU1_SCHPO (Sorbose reductase sou1 OS=Schizosaccharomyces pombe GN=sou1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.175e-19
Identity = 63/177 (35.59%), Postives = 91/177 (51.41%), Query Frame = -2
Query:  211 NQVSSLLDGKLNILINNVGTTIRKATVEYTAED-FSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSV-VDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGF 735
            NQ    L G+L+++I N G  I   ++E   ED ++ ++  N   AY   Q A    K  G  S++  +S+ G ++      + Y ATK A+ HLAR LA EWA    R NSV+P ++ T LT     DE   K+ +  TP  R G P+E+     +L   A+SY TG  I  DGG+
Sbjct:   79 NQAVEELGGRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYYTAQAAGHHFKKQGKGSLIFTASMSGHIANWPQQWASYHATKAAVKHLARALAVEWAPF-ARVNSVSPGYIDTDLT--LYADENLRKKWKEYTPQARIGLPDELPGAYLYLASDASSYCTGSDIIVDGGY 252          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: KDUD_ECOLI (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=kduD PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 4.175e-19
Identity = 59/188 (31.38%), Postives = 100/188 (53.19%), Query Frame = -2
Query:  205 INQVSSLLD------GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLA--HPLLKASGA--ASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFPA 738
            I+ + +LLD      G ++IL+NN G   R+  +E++ +D+  +M  N +S + + Q A  H + + +G    +I  M S  GG+ V      Y A+K  +  + R++A EWA+ NI  N++ P ++ T  T+    DE    E+  R P  R G P+++   + FL   A+ Y+ G TI+ DGG+ A
Sbjct:   69 IDGIPALLDRAVAEFGHIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPS----YTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPIVFLASSASDYVNGYTIAVDGGWLA 252          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: UCPA_SALTY (Oxidoreductase ucpA OS=Salmonella typhimurium GN=ucpA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.121e-19
Identity = 56/173 (32.37%), Postives = 88/173 (50.87%), Query Frame = -2
Query:  214 DGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFL------NDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 714
            +G+++IL+NN G       ++ + ED  F +  N +  +N+ +   P +       IV+MSSV G +      + Y  +K A+  L + LA E+AQ  IR N++ P +V TP+ ES        + E+ L E+    P+RR   P E+  L AFL    +SY+TG     DGG
Sbjct:   80 EGRIDILVNNAGVCRLGNFLDMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGG 252          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: UCPA_SALTI (Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.121e-19
Identity = 56/173 (32.37%), Postives = 88/173 (50.87%), Query Frame = -2
Query:  214 DGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFL------NDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 714
            +G+++IL+NN G       ++ + ED  F +  N +  +N+ +   P +       IV+MSSV G +      + Y  +K A+  L + LA E+AQ  IR N++ P +V TP+ ES        + E+ L E+    P+RR   P E+  L AFL    +SY+TG     DGG
Sbjct:   80 EGRIDILVNNAGVCRLGNFLDMSEEDRDFHIDINIKGVWNVTKAVLPEMIKRKDGRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGG 252          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: Y4MP_RHISN (Uncharacterized short-chain type dehydrogenase/reductase y4mP OS=Rhizobium sp. (strain NGR234) GN=NGR_a02430 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.586e-18
Identity = 59/174 (33.91%), Postives = 89/174 (51.15%), Query Frame = -2
Query:  202 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVC----GGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFPAH 711
            G  NILINN G T    T++ +  D+  ++A N     NL Q+  P ++ +G  SI  MSSV     GG+     G  Y A K  +  LA+ +A E+  D+IR N VTP  + T +T   L+ E     V+G  P+ R G   +++++  FL    ++Y+TG  I  +GG   H
Sbjct:   84 GVANILINNAGITQPVKTLDISDADWQRIVAVNMTGVLNLSQVFIPNMRQNGGGSIACMSSVSAQRGGGIF---GGPHYSAAKAGVLGLAKAMAREFGPDSIRVNCVTPGLIQTDITGDKLSAEMRADIVKG-IPLSRLGDARDVANIYLFLASDLSAYVTGAVIDVNGGMLIH 253          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: KDUD_DICD3 (2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=Dickeya dadantii (strain 3937) GN=kduD PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.534e-18
Identity = 54/173 (31.21%), Postives = 93/173 (53.76%), Query Frame = -2
Query:  205 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQ-LAHPLLKASGAASIVLMSSVC---GGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFPA 711
            GK++IL+NN G   R+  +E++ +++  +M  N +S + + Q +A   +K      I+ ++S+    GG+ V      Y A+K  +  + RI+A EWA+ NI  N++ P ++ T  T+    D+   KE+  R P  R G P ++     FL   A+ Y+ G TI+ DGG+ A
Sbjct:   84 GKVDILVNNAGIIRREDAIEFSEKNWDDVMNLNIKSVFFMSQTVARQFIKQGHGGKIINIASMLSFQGGIPVPS----YTASKKRVMGITRIVANEWAKHNINVNAIAPGYMATNNTQHVRADQDRSKEILDRIPAGRWGLPQDLQGPAVFLASSASDYVNGYTIAVDGGWLA 252          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG_CHLTR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia trachomatis GN=fabG PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 4.616e-18
Identity = 56/165 (33.94%), Postives = 89/165 (53.94%), Query Frame = -2
Query:  214 LNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQ-LAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 705
            +++++NN G T     +  + E++S ++ TN  S YN+C  +  P++KA   A I + S V  G+      + Y A K  +   ++ L+ E    NIR N + P F+ T +T+S LND    + ++G  P+ R G P EI+    FL    +SYITGQ +S DGG
Sbjct:   86 IDVIVNNAGITRDALLMRMSEEEWSSVINTNLGSIYNVCSAVIRPMIKARSGAIINISSIV--GLRGSPGQTNYAAAKAGIIGFSKALSKEVGSKNIRVNCIAPGFIDTDMTKS-LNDNLKNEWLKG-VPLGRVGMPEEIAKAALFLASDGSSYITGQVLSVDGG 246          
The following BLAST results are available for this feature:
BLAST of CN185542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
FABG_THEMA1.874e-1933.733-oxoacyl-[acyl-carrier-protein] reductase OS=Ther... [more]
BACC_BACSU2.448e-1935.43Bacilysin biosynthesis oxidoreductase bacC OS=Baci... [more]
ARDH_CANTR2.448e-1933.93D-arabinitol 2-dehydrogenase [ribulose-forming] OS... [more]
SOU1_SCHPO4.175e-1935.59Sorbose reductase sou1 OS=Schizosaccharomyces pomb... [more]
KDUD_ECOLI4.175e-1931.382-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=E... [more]
UCPA_SALTY7.121e-1932.37Oxidoreductase ucpA OS=Salmonella typhimurium GN=u... [more]
UCPA_SALTI7.121e-1932.37Oxidoreductase ucpA OS=Salmonella typhi GN=ucpA PE... [more]
Y4MP_RHISN1.586e-1833.91Uncharacterized short-chain type dehydrogenase/red... [more]
KDUD_DICD33.534e-1831.212-dehydro-3-deoxy-D-gluconate 5-dehydrogenase OS=D... [more]
FABG_CHLTR4.616e-1833.943-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001I02_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001I02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185542 ID=CN185542; Name=CN185542; organism=Citrus sinensis; type=EST; length=742bp
TTTTTTTTTTTTTTTTTATGGAATAAAGCGACGACACTCGATAAAAGCCT
TATAAAAGACCATCCACAAGATGAGTCAAAAATCAAAACACTTACATGCT
GGCGGTTTATTAGGGCCGGAGAAATCACAACACTAAGTTATCAGATTCGA
AGATTTCAGAGAAGTGGACAAAATAAATCAGGTACTTGGGAAGAAGAATG
CATGCGCGGGAAATCCTCCGTCAGCGGAAATTGTCTGACCAGTTATATAA
GAGGCTGCAGGCATGCATAAAAATGCTACCAATGAAGATATCTCATTTGG
CTTCCCTGTGCGTCTCATTGGAGTTCGACCCTCGACTTCCTTTAAAAATG
CCTCATCATTCAGAAAAGATTCAGTTAAAGGAGTCGGGACGAACCAAGGT
GTGACAGAATTGGTCCTAATATTGTCTTGAGCCCACTCGCATGCCAAAAT
CCTCGCAAGATGGTTCATGGCTCCTTTCGTAGCTCCATATATGGATCCAG
CGTCAACAACTGACACCCCCCCACAAACAGAAGACATTAGAACAATACTT
GCTGCCCCCGAAGCTTTCAAAAGAGGATGTGCAAGTTGGCACAGATTGTA
AGCAGACTCAAAATTGGTAGCCATGAGAAACGAGAAATCTTCTGCTGTGT
ACTCCACAGTCGCCTTTCTTATAGTCGTCCCGACGTTGTTTATGAGAATG
TTAAGTTTTCCATCCAACAGAGAGGAGACTTGGTTTATAAGC
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