CN185542

Overview
NameCN185542
Unique NameCN185542
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: YF3H_SCHPO (Uncharacterized oxidoreductase C22A12.17c OS=Schizosaccharomyces pombe GN=SPAC22A12.17c PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13
Identity = 50/166 (30.12%), Postives = 81/166 (48.80%), Query Frame = -2
Query:  211 LNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGV-SVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGF 705
            ++I++ N G    K+ ++ T E+F+  +  N    +N+   A P+ +  G  S+V  +S+ G V +V      Y  +K  +  L + LA EW +   R N V+P +  + +T        F KE E  TP  R G   EI+S   +L   AASY +G  +  DGG+
Sbjct:   99 IDIVVPNNGICTGKSAIDMTYEEFANEINVNLLGVFNVAHNAGPIFQKQGHGSLVATASMSGVVVNVPQQQCAYNTSKAGVIQLIKSLAVEWRKF-ARVNCVSPGYTTSDMTGG-----KFHKEWEPYTPFERNGLAKEIASAYLYLASDAASYASGTNLIVDGGY 258          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FIXR_BRAJA (Protein fixR OS=Bradyrhizobium japonicum GN=fixR PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.537e-13
Identity = 58/184 (31.52%), Postives = 91/184 (49.46%), Query Frame = -2
Query:  214 INQVSSLLDGK-LNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASG--------AASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 738
            I +V   L G  L+ L+NN G + +  T +      S   +T+         L  P+L A G        + SIV ++S+ G      AGS Y  +K A+  L R LA ++A   IR N++ P  + T +    L+ +A  + V    P+RR G P+E++ ++ FLC  AASY+TG  +  +GG
Sbjct:  100 ITEVKKRLAGAPLHALVNNAGVSPKTPTGDRMT---SLTTSTDTWMRVFHLNLVAPILLAQGLFDELRAASGSIVNVTSIAGSRVHPFAGSAYATSKAALASLTRELAHDYAPHGIRVNAIAPGEIRTDM----LSPDAEARVVAS-IPLRRVGTPDEVAKVIFFLCSDAASYVTGAEVPINGG 275          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: CBR4_XENLA (Carbonyl reductase family member 4 OS=Xenopus laevis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13
Identity = 53/170 (31.18%), Postives = 85/170 (50.00%), Query Frame = -2
Query:  202 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFPAH 711
            G ++ L+N+ G +     +   +ED   L++ N       C++A   +      SIV + S+ G    +   SIYGA+K  +   ++ LA E A+ NIR N V P F+ T +T S L +++  K +    P+ R G+P E++  V FL    + YITG  +  DGG   H
Sbjct:   74 GNIDYLVNSAGISRDALLLRTRSEDIMSLLSINLVGTIQTCKVALKGMIQQQGGSIVNIGSIVGHKGNIGQ-SIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIRTDMT-SDLKEDSLNKMI----PLGRFGEPEEVAQSVLFLL--ESPYITGHVLVVDGGLQLH 235          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG_SHIFL (3-oxoacyl-[acyl-carrier-protein] reductase OS=Shigella flexneri GN=fabG PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 48/166 (28.92%), Postives = 81/166 (48.80%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 711
            G+++IL+NN G T     +    E+++ ++ TN  S + L +     +       I+ + SV G +      + Y A K  +   ++ LA E A   I  N V P F+ T +T +  +D+     +  + P  R G   EI++ VAFL    A+YITG+T+  +GG
Sbjct:   78 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQAN-YAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQR--AGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGG 240          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG_ECOLI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Escherichia coli (strain K12) GN=fabG PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 48/166 (28.92%), Postives = 81/166 (48.80%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 711
            G+++IL+NN G T     +    E+++ ++ TN  S + L +     +       I+ + SV G +      + Y A K  +   ++ LA E A   I  N V P F+ T +T +  +D+     +  + P  R G   EI++ VAFL    A+YITG+T+  +GG
Sbjct:   78 GEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQAN-YAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQR--AGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGG 240          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG6_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase (Fragments) OS=Brassica napus PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 50/167 (29.94%), Postives = 81/167 (48.50%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCM-PAASYITGQTISADGG 711
            G+++++ NN G T+               +A N    +   Q A  ++       I+ ++SV G +  +   + Y A K  +   ++  A E A  NI  N V P F+ + +T     D    K++ G  P+ R G+P +++ LV FL + PAASYITGQT + DGG
Sbjct:   50 GQIDVIANNAGITV---------------IALNLTGVFLCSQAATKIMMKKRKGRIINIASVVGLIGNIGQAN-YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASEMTAKLGEDME--KKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQTFTIDGG 198          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: CBR2_PIG (Carbonyl reductase [NADPH] 2 OS=Sus scrofa GN=CBR2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 47/170 (27.65%), Postives = 85/170 (50.00%), Query Frame = -2
Query:  205 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQL-AHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFPA 711
            G +++L+NN    + +  ++ T E F      N  S + + Q+ A  +++     SIV +SS+   V+     + Y +TKGAM  L + +A E     IR NSV P  V T +  S  +D    ++++ R PMR+  +  ++ + + FL    ++  +G +I  D G+ A
Sbjct:   75 GPVDLLVNNAAVALMQPFLDTTKEVFDRSFNVNLRSVFQVSQIVARSMIERGVPGSIVNVSSMVSHVTYPGLAA-YSSTKGAMTMLTKSMAMELGPHKIRVNSVNPTVVLTAMGRSVTSDPELARKLKERHPMRKFAEVEDVVNSILFLLSDRSASTSGSSIFVDAGYLA 243          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: BDH2_MOUSE (3-hydroxybutyrate dehydrogenase type 2 OS=Mus musculus GN=Bdh2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 49/180 (27.22%), Postives = 87/180 (48.33%), Query Frame = -2
Query:  211 INQVSSLLDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFL----NDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGF 738
            I+Q +S ++ ++++L N  G       ++   +D+ F M  N  S + + +   P + A  + +I+ MSSV   +  V+   +Y ATK A+  L + +A ++ Q  IR N V P  V TP  +  +    N +  LK    R    R     E++ L  +L    ++Y+TG  +  DGG+
Sbjct:   65 IDQFASEIE-RIDVLFNVAGFVHHGTILDCEEKDWDFSMNLNVRSMFLMIKAFLPKMLAQKSGNIINMSSVASSIKGVENRCVYSATKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARDNPKEALKTFLNRQKTGRFASAEEVALLCVYLASDESAYVTGNPVIIDGGW 243          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: T4HR_MAGGR (Tetrahydroxynaphthalene reductase OS=Magnaporthe grisea GN=MGG_02252 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.423e-13
Identity = 49/177 (27.68%), Postives = 80/177 (45.20%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPT-----------PLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 711
            GKL+I+ +N G        + T E+F  +   N    + + + A+  L+  G   ++LM S+ G    V   ++Y  +KGA+   AR +A + A   I  N V P  + T           P  E+  N+E         +P+ R G P +I+ +V FL      ++TG+ I  DGG
Sbjct:  106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGR--LILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAASAWSPLHRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG 280          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG_BUCAP (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=fabG PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.423e-13
Identity = 56/165 (33.94%), Postives = 85/165 (51.52%), Query Frame = -2
Query:  214 LNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSI-YGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 705
            ++ILINN G T     V  + +++  ++  N  S + + +     +       IV + SV G +   + G I Y A+K  +    + LA E AQ  I  N V+P F+ T LT++ LN   + K +  + PM+R G   EI++ V FL    ASYITGQTI  +GG
Sbjct:   80 IDILINNAGITSDNLLVYMSNKEWENVIKINLTSVFYMSKSVIRSMIKKRYGRIVTIGSVIGYLG--NRGQINYSASKSGLIGFHKSLALEVAQKGITVNIVSPGFIKTNLTKN-LNVFQYKKHLS-KIPMKRIGTAEEIANAVIFLSSEKASYITGQTIHVNGG 240          
The following BLAST results are available for this feature:
BLAST of CN185542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
YF3H_SCHPO1.537e-1330.12Uncharacterized oxidoreductase C22A12.17c OS=Schiz... [more]
FIXR_BRAJA1.537e-1331.52Protein fixR OS=Bradyrhizobium japonicum GN=fixR P... [more]
CBR4_XENLA2.007e-1331.18Carbonyl reductase family member 4 OS=Xenopus laev... [more]
FABG_SHIFL2.621e-1328.923-oxoacyl-[acyl-carrier-protein] reductase OS=Shig... [more]
FABG_ECOLI2.621e-1328.923-oxoacyl-[acyl-carrier-protein] reductase OS=Esch... [more]
FABG6_BRANA2.621e-1329.943-oxoacyl-[acyl-carrier-protein] reductase (Fragme... [more]
CBR2_PIG2.621e-1327.65Carbonyl reductase [NADPH] 2 OS=Sus scrofa GN=CBR2... [more]
BDH2_MOUSE2.621e-1327.223-hydroxybutyrate dehydrogenase type 2 OS=Mus musc... [more]
T4HR_MAGGR3.423e-1327.68Tetrahydroxynaphthalene reductase OS=Magnaporthe g... [more]
FABG_BUCAP3.423e-1333.943-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001I02_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001I02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185542 ID=CN185542; Name=CN185542; organism=Citrus sinensis; type=EST; length=742bp
TTTTTTTTTTTTTTTTTATGGAATAAAGCGACGACACTCGATAAAAGCCT
TATAAAAGACCATCCACAAGATGAGTCAAAAATCAAAACACTTACATGCT
GGCGGTTTATTAGGGCCGGAGAAATCACAACACTAAGTTATCAGATTCGA
AGATTTCAGAGAAGTGGACAAAATAAATCAGGTACTTGGGAAGAAGAATG
CATGCGCGGGAAATCCTCCGTCAGCGGAAATTGTCTGACCAGTTATATAA
GAGGCTGCAGGCATGCATAAAAATGCTACCAATGAAGATATCTCATTTGG
CTTCCCTGTGCGTCTCATTGGAGTTCGACCCTCGACTTCCTTTAAAAATG
CCTCATCATTCAGAAAAGATTCAGTTAAAGGAGTCGGGACGAACCAAGGT
GTGACAGAATTGGTCCTAATATTGTCTTGAGCCCACTCGCATGCCAAAAT
CCTCGCAAGATGGTTCATGGCTCCTTTCGTAGCTCCATATATGGATCCAG
CGTCAACAACTGACACCCCCCCACAAACAGAAGACATTAGAACAATACTT
GCTGCCCCCGAAGCTTTCAAAAGAGGATGTGCAAGTTGGCACAGATTGTA
AGCAGACTCAAAATTGGTAGCCATGAGAAACGAGAAATCTTCTGCTGTGT
ACTCCACAGTCGCCTTTCTTATAGTCGTCCCGACGTTGTTTATGAGAATG
TTAAGTTTTCCATCCAACAGAGAGGAGACTTGGTTTATAAGC
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