CN185542

Overview
NameCN185542
Unique NameCN185542
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG5_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic (Fragment) OS=Brassica napus GN=bkr1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.423e-13
Identity = 48/168 (28.57%), Postives = 80/168 (47.62%), Query Frame = -2
Query:  211 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCM-PAASYITGQTISADGGF 711
            G +++++NN G T     +      +  ++  N    +   Q A  ++       I+ ++SV G +  +   + Y A K  +   ++  A E A  NI  N V P F+ + +T     D    K++ G  P+ R G+P  ++ LV FL + PA+SYITG T S  GGF
Sbjct:  151 GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQAN-YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDME--KKILGTIPLGRYGQPEYVAGLVEFLALSPASSYITGHTFSIHGGF 315          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: DCXR_HUMAN (L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.423e-13
Identity = 47/168 (27.98%), Postives = 83/168 (49.40%), Query Frame = -2
Query:  211 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGA-ASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGF 711
            G +++L+NN    + +  +E T E F      N  +   + Q+    L A G   +IV +SS C   +V +  S+Y +TKGA++ L +++A E     IR N+V P  V T + ++  +D    K +  R P+ +  +   + + + FL    +   TG T+  +GGF
Sbjct:   75 GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNH-SVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF 241          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: DHRS4_MOUSE (Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.471e-13
Identity = 46/168 (27.38%), Postives = 82/168 (48.81%), Query Frame = -2
Query:  205 LNILINNVGTT-IRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFPA 705
            ++IL++N          ++ T E +  +++ N  +   + +   P ++  G  S+V++ SV G       G  Y  +K A+  L +  A E A  NIR N + P  + T  +     ++A    ++    +RR GKP + + +V+FLC   ASYI G+T+   GG P+
Sbjct:   92 IDILVSNAAVNPFFGNLMDVTEEVWDKVLSINVTATAMMIKAVVPEMEKRGGGSVVIVGSVAGFTRFPSLGP-YNVSKTALLGLTKNFAAELAPKNIRVNCLAPGLIKTRFSSVLWEEKAREDFIKEAMQIRRLGKPEDCAGIVSFLCSEDASYINGETVVVGGGTPS 258          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: CBR2_MOUSE (Carbonyl reductase [NADPH] 2 OS=Mus musculus GN=Cbr2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.471e-13
Identity = 48/170 (28.24%), Postives = 85/170 (50.00%), Query Frame = -2
Query:  205 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQL-AHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFPA 711
            G +++L+NN    I +  +E T E F    + N  S + + Q+ A  ++      SIV +SS+   V+  +  + Y +TKGAM  L + +A E     IR NSV P  V T + +    D  F ++++ R P+R+  +  ++ + + FL    ++  +G  I  D G+ A
Sbjct:   75 GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLIT-YSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAGYLA 243          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: PHBB_RHIME (Acetoacetyl-CoA reductase OS=Rhizobium meliloti GN=phbB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.839e-13
Identity = 51/169 (30.18%), Postives = 85/169 (50.30%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPL---LKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 711
            G ++IL+NN G T      + T E +  ++ TN    +N+    HPL   ++  G   IV +SS+ G    +   + Y A K     L + LA E A   I  N++ P ++ T +  + + ++   + +  + P+ R G+P E++  V FL    A +ITG TISA+GG
Sbjct:   74 GPVDILVNNAGITRDAMFHKMTPEQWGEVIGTNLTGVFNM---THPLWSGMRDRGFGRIVNISSINGQKGQMGQVN-YSAAKAGDLGLTKALAQEGAAKGITVNAICPGYIGTEMVRA-VPEKVLNERIIPQIPVGRLGEPEEVARCVVFLASDDAGFITGSTISANGG 237          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: DHRS4_PIG (Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.839e-13
Identity = 48/169 (28.40%), Postives = 86/169 (50.89%), Query Frame = -2
Query:  214 LDGKLNILINNVGTT-IRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 717
            L G ++IL++N          ++ T E +  ++  N ++   + +   P ++  G  S++++SSV       + G  Y  +K A+  L + LA E A  NIR N + P  + T  ++    D+A  + ++    +RR G P + + +V+FLC   ASYITG+T+   GG
Sbjct:   88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGP-YNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGG 255          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG_RICBR (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia bellii (strain RML369-C) GN=fabG PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13
Identity = 52/165 (31.52%), Postives = 86/165 (52.12%), Query Frame = -2
Query:  214 KLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 708
            KL+IL+ N G T     +    EDF  ++  N ++ + L + A   +  +    I+ ++S+ G VS     + Y A+K  +  + + LA E A   I  N+V P F+ + +T+  LNDE   + +  + P    G P +I++ VAFL    +SYITGQT+  +GG
Sbjct:   76 KLDILVCNAGITKDTLAIRMKNEDFDQVIDINLKANFILNREAIKKMMTNRYGRIINITSIVG-VSGNPGQANYCASKAGLIGMTKSLAYEVATRGITVNAVAPGFIKSDMTDK-LNDEQ-KEAITRKIPKGTYGMPEDIANAVAFLASKQSSYITGQTLHVNGG 237          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: DCXR_CAEEL (Probable L-xylulose reductase OS=Caenorhabditis elegans GN=dhs-21 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13
Identity = 52/163 (31.90%), Postives = 77/163 (47.24%), Query Frame = -2
Query:  211 LINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQL-AHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGF 696
            L+NN G     A  + T +      A N      + QL A   +      SIV +SS    +  +D  ++Y A+K A++ + R LA E    NIR NSV P  V T +     +D    K++  R P++R  + +E+ + V FL    AS  TG T+  DGGF
Sbjct:   87 LVNNAGIATNHAIGQITQQSIDRTFAVNVRGPILIAQLVARNFVDRQIKGSIVNISSQAA-IRPLDNHTVYCASKAALDMVTRCLANELGSQNIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRMPIKRFAEVDEVVNAVLFLLSDNASMTTGSTLPVDGGF 248          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: BAIA1_EUBSP (Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (strain VPI 12708) GN=baiA1 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13
Identity = 54/169 (31.95%), Postives = 82/169 (48.52%), Query Frame = -2
Query:  211 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLND--EAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGF 711
            G+L+++INN G T+       + EDF  +M  N    +N    A+  +K +    I+  +SV G    + +G  Y  +K  +  L   L  E  + NIR   V P  V T +T+    +  E +LK +    PM+R  KP EI+++  FL    AS IT  TIS DG +
Sbjct:   84 GRLDVMINNAGITMNSVFSRVSEEDFKNIMDINVNGVFNGAWSAYQCMKDAKQGVIINTASVTGIYGSL-SGIGYPTSKAGVIGLTHGLGREIIRKNIRVVGVAPGVVDTDMTKGLPPEILEDYLKTL----PMKRMLKPEEIANVYLFLASDLASGITATTISVDGAY 247          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: YGFF_ECOLI (Uncharacterized oxidoreductase ygfF OS=Escherichia coli (strain K12) GN=ygfF PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13
Identity = 56/171 (32.75%), Postives = 84/171 (49.12%), Query Frame = -2
Query:  214 DGKLNILINNVGTTIRKATVE-YTAEDFSFLMATNFESAYNLCQLA--HPLLKASGAA-SIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 714
            D  L  L+NN G    + TVE  TAE  + +++TN    +  C+ A     LK  G+  +IV +SSV   +        Y A+KGA++ L   L+ E A   IR N V P F+ T +  S   +   +  V+   PM+R G+  E++  + +L    ASY+TG  I   GG
Sbjct:   77 DEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKNGGSGGAIVNVSSVASRLGSPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASG-GEPGRVDRVKSNIPMQRGGQAEEVAQAIVWLLSDKASYVTGSFIDLAGG 246          
The following BLAST results are available for this feature:
BLAST of CN185542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
FABG5_BRANA3.423e-1328.573-oxoacyl-[acyl-carrier-protein] reductase 5, chlo... [more]
DCXR_HUMAN3.423e-1327.98L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 ... [more]
DHRS4_MOUSE4.471e-1327.38Dehydrogenase/reductase SDR family member 4 OS=Mus... [more]
CBR2_MOUSE4.471e-1328.24Carbonyl reductase [NADPH] 2 OS=Mus musculus GN=Cb... [more]
PHBB_RHIME5.839e-1330.18Acetoacetyl-CoA reductase OS=Rhizobium meliloti GN... [more]
DHRS4_PIG5.839e-1328.40Dehydrogenase/reductase SDR family member 4 OS=Sus... [more]
FABG_RICBR7.626e-1331.523-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
DCXR_CAEEL7.626e-1331.90Probable L-xylulose reductase OS=Caenorhabditis el... [more]
BAIA1_EUBSP7.626e-1331.95Bile acid 7-dehydroxylase 1/3 OS=Eubacterium sp. (... [more]
YGFF_ECOLI9.960e-1332.75Uncharacterized oxidoreductase ygfF OS=Escherichia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001I02_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001I02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185542 ID=CN185542; Name=CN185542; organism=Citrus sinensis; type=EST; length=742bp
TTTTTTTTTTTTTTTTTATGGAATAAAGCGACGACACTCGATAAAAGCCT
TATAAAAGACCATCCACAAGATGAGTCAAAAATCAAAACACTTACATGCT
GGCGGTTTATTAGGGCCGGAGAAATCACAACACTAAGTTATCAGATTCGA
AGATTTCAGAGAAGTGGACAAAATAAATCAGGTACTTGGGAAGAAGAATG
CATGCGCGGGAAATCCTCCGTCAGCGGAAATTGTCTGACCAGTTATATAA
GAGGCTGCAGGCATGCATAAAAATGCTACCAATGAAGATATCTCATTTGG
CTTCCCTGTGCGTCTCATTGGAGTTCGACCCTCGACTTCCTTTAAAAATG
CCTCATCATTCAGAAAAGATTCAGTTAAAGGAGTCGGGACGAACCAAGGT
GTGACAGAATTGGTCCTAATATTGTCTTGAGCCCACTCGCATGCCAAAAT
CCTCGCAAGATGGTTCATGGCTCCTTTCGTAGCTCCATATATGGATCCAG
CGTCAACAACTGACACCCCCCCACAAACAGAAGACATTAGAACAATACTT
GCTGCCCCCGAAGCTTTCAAAAGAGGATGTGCAAGTTGGCACAGATTGTA
AGCAGACTCAAAATTGGTAGCCATGAGAAACGAGAAATCTTCTGCTGTGT
ACTCCACAGTCGCCTTTCTTATAGTCGTCCCGACGTTGTTTATGAGAATG
TTAAGTTTTCCATCCAACAGAGAGGAGACTTGGTTTATAAGC
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