CN185542

Overview
NameCN185542
Unique NameCN185542
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: PHBB_CHRVI (Acetoacetyl-CoA reductase OS=Chromatium vinosum GN=phbB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.960e-13
Identity = 49/170 (28.82%), Postives = 82/170 (48.24%), Query Frame = -2
Query:  202 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFPAH 711
            G ++IL+N  G T  K   +     +  ++  N  S +N+ +     +   G   I+ +SSV G        + Y A K  M+     LA E A   +  N+++P +V T +T + +ND+     + G  PMRR  +PNEI++ +AFL    + Y+TG  +  +GG   H
Sbjct:   80 GPIDILVNCAGITRDKTFKKMEQAHWEAVINVNLNSVFNVTRQVWDGMLERGFGRIINISSVNGQRGQFGQAN-YSAAKAGMHGFTMALAQEGASKGVTVNTISPGYVETAMTLA-MNDDVRNSIISG-IPMRRMAQPNEIAAAIAFLAGDESGYMTGANLPVNGGLFMH 246          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG_RICFE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Rickettsia felis GN=fabG PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.301e-12
Identity = 49/165 (29.70%), Postives = 85/165 (51.52%), Query Frame = -2
Query:  214 KLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 708
            KL+IL+ N G T     +    EDF  ++  N ++ + L + A   +  +    I+ +SS+ G +S     + Y A+K  +  + + L+ E A   I  N+V P F+ + +T+    +E   + +  + P+   G P ++++ VAFL    ASYITGQTI  +GG
Sbjct:   76 KLDILVCNAGITSDTLAIRMKDEDFDKVIDINLKANFILNREAIKKMMQNRYGRIINISSIVG-ISGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTYGMPEDVANAVAFLASDQASYITGQTIHVNGG 237          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: MTDH_ALTAL (Probable NADP-dependent mannitol dehydrogenase OS=Alternaria alternata PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.699e-12
Identity = 46/168 (27.38%), Postives = 78/168 (46.43%), Query Frame = -2
Query:  211 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGV-SVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGF 711
            GK+++ I N G T     ++ T E ++ ++ T+    +N  +      +     S+V+ SS+ G + +     + Y   K    HLA+ LA EW +D  R NS++P ++ T L++    D    K      PM R  K  E+     +    A+SY TG  +  DGG+
Sbjct:   99 GKVDVFIANAGKTADNGILDATVEQWNEVIQTDLTGTFNCARAVGLHFRERKTGSLVITSSMSGHIANFPQEQASYNVAKAGCIHLAKSLANEW-RDFARVNSISPGYIDTGLSDFVPQD--IQKLWHSMIPMGRDAKATELKGAYVYFASDASSYCTGSDLLIDGGY 263          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG_PSEAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Pseudomonas aeruginosa GN=fabG PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.699e-12
Identity = 50/167 (29.94%), Postives = 80/167 (47.90%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSI-YGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 711
            G+  I++NN G T     V    +++  ++ TN  S Y L +     +  +    I+ + SV G +   +AG   Y A K  +    R LA E     I  N+V P F+ T +T      EA  + + G+ P+ R G+  EI+ +V FL    A+Y+TG T+  +GG
Sbjct:   81 GQPLIVVNNAGITRDNLLVRMKDDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMG--NAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTREL--PEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGG 243          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: BDH2_BOVIN (3-hydroxybutyrate dehydrogenase type 2 OS=Bos taurus GN=BDH2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.699e-12
Identity = 48/170 (28.24%), Postives = 77/170 (45.29%), Query Frame = -2
Query:  211 KLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFL----NDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGF 708
            +L++L N  G       ++    D+ F M  N  S Y + +   P + A  + +I+ MSSV   +  V    +Y  TK A+  L + +A ++ Q  IR N V P  V TP  +  +    N E  L +   R    R     E++ L  +L    ++YITG  +  DGG+
Sbjct:   74 RLDVLFNVAGFVHHGTILDCEETDWDFSMNLNVRSMYLMIKAFLPKMMAQKSGNIINMSSVASSIKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARPNPEEALSDFLKRQKTGRFATAEEVALLCVYLASDESAYITGNPVIIDGGW 243          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABL_BACSU (Enoyl-[acyl-carrier-protein] reductase [NADPH] OS=Bacillus subtilis GN=fabL PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.219e-12
Identity = 47/166 (28.31%), Postives = 80/166 (48.19%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 711
            G+L++ +NN  + + +  +E     + + M  N ++     Q A  L++ +G   IV +SS+ G +  ++  +  G +K A+  L R LA E +   I  N+V+   + T   + F N E  L++    TP  R  +  ++   V FL    A  I GQTI  DGG
Sbjct:   81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSL-GSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGG 245          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: YAY8_SCHPO (Uncharacterized oxidoreductase C4H3.08 OS=Schizosaccharomyces pombe GN=SPAC4H3.08 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.898e-12
Identity = 52/167 (31.14%), Postives = 85/167 (50.90%), Query Frame = -2
Query:  214 GKLNILINNVG-TTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 711
            G +++L+NN+    + ++  +   E +     TN  S + + + A   +K+   +SIV  SS+   V   D    Y +TKGA+    R L+ ++AQ  IR N+V P  + TPL  S    E    E+  + P+ R G+P E++S   FL      Y+TGQT+  +GG
Sbjct:  120 GWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFKTNIFSFFWVTKAAISHMKSG--SSIVNCSSINAYVGRPDLLD-YTSTKGAITAFTRGLSNQYAQHGIRVNAVAPGPIYTPLVSSTFPKEKI--ELSDQVPLGRMGQPVEVASCYLFLACSDGGYMTGQTLHPNGG 281          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: SOU2_CANAL (Sorbose reductase homolog SOU2 OS=Candida albicans GN=SOU2 PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.898e-12
Identity = 48/170 (28.24%), Postives = 85/170 (50.00%), Query Frame = -2
Query:  211 GKLNILINNVGTTIRKAT-VEYTAED-FSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGG-VSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGF 711
            G ++I + N G    +   ++    D ++ ++  +  S Y    +  P+ +  G  S +  +S+    V+V    + Y A K  + HL++ L+ EWA    R NSV+P ++ T L+E F + +   K ++  TP+ R  KP E+     +L   AASY TG  ++ DGG+
Sbjct:  111 GTIDIFVANAGVAWTEGPEIDVKGVDKWNKVVDVDLNSVYYCAHVVGPIFRKKGKGSFIFTASMSASIVNVPQLQAAYNAAKAGVKHLSKSLSVEWAPF-ARVNSVSPGYIATHLSE-FADPDVKSKWLQ-LTPLGREAKPRELVGAYLYLASDAASYTTGADLAVDGGY 277          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: PHBB_ZOORA (Acetoacetyl-CoA reductase OS=Zoogloea ramigera GN=phbB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.898e-12
Identity = 45/166 (27.11%), Postives = 83/166 (50.00%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 711
            G +++L+NN G T      + T + ++ ++ TN    +N+       ++      IV +SS+ G    +   + Y A K       + LA E A   I  N++ P ++ T +  + + ++   + +  + P+ R G+P+EI+ +V FL    A +ITG TISA+GG
Sbjct:   74 GPIDVLVNNAGITKDAMFHKMTPDQWNAVINTNLTGLFNMTHPVWSGMRDRSFGRIVNISSINGQKGQMGQAN-YSAAKAGDLGFTKALAQEGAAKGITVNAICPGYIGTEMVRA-IPEKVLNERIIPQIPVGRLGEPDEIARIVVFLASDEAGFITGSTISANGG 237          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: LINX_PSEPA (2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase OS=Pseudomonas paucimobilis GN=linX PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.898e-12
Identity = 53/177 (29.94%), Postives = 87/177 (49.15%), Query Frame = -2
Query:  211 NQVSSLLDG--KLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGF 735
            N +++ +DG   L  L N  G        E + E ++ ++A N  + +   + A P L  SG  SI+ +SS+ G        S Y ATK A+  +++  A E+    +R N++ P  + TP+T +   D   LK+   + PM + G P +I++   FL    A YITG  +  DGG+
Sbjct:   73 NAIAAAVDGFGGLTTLSNTAGIIHPGGFEEESIEGWNKMVAVNQTAIFLGIKAAIPELVKSGNGSIINISSLIGMFPTAGNAS-YCATKAAVRIMSKAAALEFVDRGVRVNTIVPGGMNTPITANVPPD--VLKQQTSQIPMGKLGDPIDIANGALFLASDEAKYITGVDLPIDGGW 246          
The following BLAST results are available for this feature:
BLAST of CN185542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
PHBB_CHRVI9.960e-1328.82Acetoacetyl-CoA reductase OS=Chromatium vinosum GN... [more]
FABG_RICFE1.301e-1229.703-oxoacyl-[acyl-carrier-protein] reductase OS=Rick... [more]
MTDH_ALTAL1.699e-1227.38Probable NADP-dependent mannitol dehydrogenase OS=... [more]
FABG_PSEAE1.699e-1229.943-oxoacyl-[acyl-carrier-protein] reductase OS=Pseu... [more]
BDH2_BOVIN1.699e-1228.243-hydroxybutyrate dehydrogenase type 2 OS=Bos taur... [more]
FABL_BACSU2.219e-1228.31Enoyl-[acyl-carrier-protein] reductase [NADPH] OS=... [more]
YAY8_SCHPO2.898e-1231.14Uncharacterized oxidoreductase C4H3.08 OS=Schizosa... [more]
SOU2_CANAL2.898e-1228.24Sorbose reductase homolog SOU2 OS=Candida albicans... [more]
PHBB_ZOORA2.898e-1227.11Acetoacetyl-CoA reductase OS=Zoogloea ramigera GN=... [more]
LINX_PSEPA2.898e-1229.942,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydroge... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001I02_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001I02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185542 ID=CN185542; Name=CN185542; organism=Citrus sinensis; type=EST; length=742bp
TTTTTTTTTTTTTTTTTATGGAATAAAGCGACGACACTCGATAAAAGCCT
TATAAAAGACCATCCACAAGATGAGTCAAAAATCAAAACACTTACATGCT
GGCGGTTTATTAGGGCCGGAGAAATCACAACACTAAGTTATCAGATTCGA
AGATTTCAGAGAAGTGGACAAAATAAATCAGGTACTTGGGAAGAAGAATG
CATGCGCGGGAAATCCTCCGTCAGCGGAAATTGTCTGACCAGTTATATAA
GAGGCTGCAGGCATGCATAAAAATGCTACCAATGAAGATATCTCATTTGG
CTTCCCTGTGCGTCTCATTGGAGTTCGACCCTCGACTTCCTTTAAAAATG
CCTCATCATTCAGAAAAGATTCAGTTAAAGGAGTCGGGACGAACCAAGGT
GTGACAGAATTGGTCCTAATATTGTCTTGAGCCCACTCGCATGCCAAAAT
CCTCGCAAGATGGTTCATGGCTCCTTTCGTAGCTCCATATATGGATCCAG
CGTCAACAACTGACACCCCCCCACAAACAGAAGACATTAGAACAATACTT
GCTGCCCCCGAAGCTTTCAAAAGAGGATGTGCAAGTTGGCACAGATTGTA
AGCAGACTCAAAATTGGTAGCCATGAGAAACGAGAAATCTTCTGCTGTGT
ACTCCACAGTCGCCTTTCTTATAGTCGTCCCGACGTTGTTTATGAGAATG
TTAAGTTTTCCATCCAACAGAGAGGAGACTTGGTTTATAAGC
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