CN185542

Overview
NameCN185542
Unique NameCN185542
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG_MYCS2 (3-oxoacyl-[acyl-carrier-protein] reductase OS=Mycobacterium smegmatis GN=fabG PE=3 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 8.432e-12
Identity = 46/166 (27.71%), Postives = 75/166 (45.18%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 711
            G + +L+ N G +     +  T E F  ++ TN   A+   Q A   ++      I+ + SV G   + +  + Y A K  +  +AR ++ E A+  +  N V P ++ T +T +   DE          P +R G   E++  V+FL    ASYI G  I  DGG
Sbjct:   88 GPVEVLVANAGISKDAFLMRMTEERFEEVINTNLTGAFRCAQRASRTMQRKRFGRIIFIGSVSGMWGIGNQAN-YAAAKAGLIGMARSISRELAKAGVTANVVAPGYIDTEMTRAL--DERIQAGALDFIPAKRVGTAEEVAGAVSFLASEDASYIAGAVIPVDGG 250          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG_HAEIN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Haemophilus influenzae GN=fabG PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.432e-12
Identity = 51/167 (30.54%), Postives = 78/167 (46.71%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSI-YGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 711
            G ++IL+NN G T     +    E++  +M TN  S Y+L +     +       I+ + SV G  S  + G   Y A K  +   ++ LA E A   I  N V P F+ T +TE   +++     +    P  R G+  +I+  VAFL    A YITG T+  +GG
Sbjct:   76 GDIDILVNNAGITRDNLLMRMKDEEWFDIMQTNLTSVYHLSKAMLRSMMKKRFGRIINIGSVVG--STGNPGQTNYCAAKAGVVGFSKSLAKEVAARGITVNVVAPGFIATDMTEVLTDEQK--AGILSNVPAGRLGEAKDIAKAVAFLASDDAGYITGTTLHVNGG 238          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: DHRS2_HUMAN (Dehydrogenase/reductase SDR family member 2 OS=Homo sapiens GN=DHRS2 PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 8.432e-12
Identity = 50/167 (29.94%), Postives = 86/167 (51.50%), Query Frame = -2
Query:  217 GKLNILINNVGTTIRKATVEYTAED-FSFLMATNFES-AYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADG 711
            G ++ L+ + G      +   T+E  +  +++ N +S A  L QL   +    GA  ++L+SS+     VV  G +Y  +K A+  L R LA E A  +IR N V P  + T  ++ F  +E+  K  +    ++R G+  + + +V+FLC P ASY+ G+ I+  G
Sbjct:   90 GGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQLLPYMENRRGA--VILVSSIAAYNPVVALG-VYNVSKTALLGLTRTLALELAPKDIRVNCVVPGIIKTDFSKVFHGNESLWKNFKEHHQLQRIGESEDCAGIVSFLCSPDASYVNGENIAVAG 253          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: DCXR_RAT (L-xylulose reductase OS=Rattus norvegicus GN=Dcxr PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.432e-12
Identity = 43/169 (25.44%), Postives = 76/169 (44.97%), Query Frame = -2
Query:  205 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFPA 711
            G +++L+NN      +  +E T E        NF +   + Q+    + A G    ++  S       +   ++Y +TKGA++ L +++A E     IR N+V P  V TP+  +  +D    K +  R P+ +  +   +   + FL    +S  TG  +  DGGF A
Sbjct:   75 GPVDLLVNNAAVATLQPFLEVTKEACDTSFNVNFRAVVQVSQIVARGMIARGVPGAIVNVSSQASQRALTNHTVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTPMGRANWSDPHKAKVMLDRIPLGKFAEVENVVDTILFLLSNRSSMTTGSALPVDGGFLA 243          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG_AGGAC (3-oxoacyl-[acyl-carrier-protein] reductase OS=Aggregatibacter actinomycetemcomitans GN=fabG PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.101e-11
Identity = 49/163 (30.06%), Postives = 81/163 (49.69%), Query Frame = -2
Query:  214 LINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQ-LAHPLLKASGAASIVLMSSVCGGVSVVDAGSI-YGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 696
            ++ N G T   A    T ED+  ++ TN +  YN+   +  P+++   A  IV ++SV G +   + G + Y A+K  +   A+ LA E A+  I  N V P  + T + +  +  +  LK +    P  R G P E++  V FL    A+Y+T Q I+ +GG
Sbjct:   84 VVLNAGLTRDNAFPALTDEDWDRVLRTNLDGFYNVLHPIMMPMIRRRKAGRIVCITSVSGLIG--NRGQVNYSASKAGIIGAAKALAVELAKRKITVNCVAPGLIDTDILDENVPIDEILKMI----PAGRMGDPEEVAHAVNFLMGEKAAYVTRQVIAVNGG 240          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG2_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 2 OS=Synechocystis sp. (strain PCC 6803) GN=fabG2 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.101e-11
Identity = 54/164 (32.93%), Postives = 84/164 (51.22%), Query Frame = -2
Query:  217 LINNVGTTIRKATVEYTAEDFSFLMATNFES-AYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLND--EAFLKEVEGRTPMRRTGKPNEISSLVAFLCMP-AASYITGQTISADG 696
            ++ N G T      + T  D+  ++  N +  AY++      + +   A SIV +SS+ G    V   + Y ATK  +  + + LA E A+  +R N+V P F+ T +T +   D  E   KE+    P RR GKP EI+  VAFL  P A+SY+TG+ +  +G
Sbjct:   79 VVANAGITKDNFFPKLTPADWDAVLNVNLKGVAYSIKPFIEGMYERK-AGSIVAISSISGERGNVGQTN-YSATKAGVIGMMKSLAREGARYGVRANAVAPGFIDTEMTLAIREDIREKITKEI----PFRRFGKPEEIAWAVAFLLSPVASSYVTGEVLRVNG 236          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: CBR4_HUMAN (Carbonyl reductase family member 4 OS=Homo sapiens GN=CBR4 PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.101e-11
Identity = 53/166 (31.93%), Postives = 78/166 (46.99%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 711
            G++N L+N  G       V    ED    + TN   +   C+ A   +      SIV + S+ G +      S+Y A+KG +   +R LA E A+  IR N V P FV T +T+  L +E   K +    P+ R G+  E++  V FL    + YITG  +  DGG
Sbjct:   75 GRVNFLVNAAGINRDGLLVRTKTEDMVSQLHTNLLGSMLTCKAAMRTMIQQQGGSIVNVGSIVG-LKGNSGQSVYSASKGGLVGFSRALAKEVARKKIRVNVVAPGFVHTDMTKD-LKEEHLKKNI----PLGRFGETIEVAHAVVFLL--ESPYITGHVLVVDGG 232          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: CBR4_BOVIN (Carbonyl reductase family member 4 OS=Bos taurus GN=CBR4 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.101e-11
Identity = 51/166 (30.72%), Postives = 77/166 (46.39%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 711
            G++N L+N  G       V    ED    + TN   +   C+ A   +      SIV + SV G +      S+Y A+KG +   +R LA E A+  IR N V P F+ T +T+  LN+E   K +    P+ R G   +++    FL    + Y+TG  +  DGG
Sbjct:   75 GRVNFLVNAAGINRDNLLVRTNTEDMLSQLHTNLLGSMLTCRAALKTMIKQQRGSIVNVGSVVG-LKGNSGQSVYSASKGGLVGFSRALAKEVAKKKIRVNVVAPGFIHTDMTKD-LNEELLKKNI----PLGRFGDALDVAQAAVFLL--ESPYVTGHVLVVDGG 232          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: BUTA_STAAW (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MW2) GN=butA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.101e-11
Identity = 50/175 (28.57%), Postives = 78/175 (44.57%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESF---LNDEAFLKEVEG------RTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 711
            G  ++++NN G          T E F  +   N        Q AH   K       ++ ++   GV      S+Y +TK A+  L ++ A + A + I  N+  P  V TP+ ES      +EA   E  G      +  + R  +P ++S++V+FL    + YITGQTI  DGG
Sbjct:   80 GDFHVMVNNAGLGPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: BUTA_STAAS (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MSSA476) GN=butA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.101e-11
Identity = 50/175 (28.57%), Postives = 78/175 (44.57%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESF---LNDEAFLKEVEG------RTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 711
            G  ++++NN G          T E F  +   N        Q AH   K       ++ ++   GV      S+Y +TK A+  L ++ A + A + I  N+  P  V TP+ ES      +EA   E  G      +  + R  +P ++S++V+FL    + YITGQTI  DGG
Sbjct:   80 GDFHVMVNNAGLGPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAHEQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLAGKDSDYITGQTIIVDGG 254          
The following BLAST results are available for this feature:
BLAST of CN185542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
FABG_MYCS28.432e-1227.713-oxoacyl-[acyl-carrier-protein] reductase OS=Myco... [more]
FABG_HAEIN8.432e-1230.543-oxoacyl-[acyl-carrier-protein] reductase OS=Haem... [more]
DHRS2_HUMAN8.432e-1229.94Dehydrogenase/reductase SDR family member 2 OS=Hom... [more]
DCXR_RAT8.432e-1225.44L-xylulose reductase OS=Rattus norvegicus GN=Dcxr ... [more]
FABG_AGGAC1.101e-1130.063-oxoacyl-[acyl-carrier-protein] reductase OS=Aggr... [more]
FABG2_SYNY31.101e-1132.933-oxoacyl-[acyl-carrier-protein] reductase 2 OS=Sy... [more]
CBR4_HUMAN1.101e-1131.93Carbonyl reductase family member 4 OS=Homo sapiens... [more]
CBR4_BOVIN1.101e-1130.72Carbonyl reductase family member 4 OS=Bos taurus G... [more]
BUTA_STAAW1.101e-1128.57Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAS1.101e-1128.57Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001I02_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001I02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185542 ID=CN185542; Name=CN185542; organism=Citrus sinensis; type=EST; length=742bp
TTTTTTTTTTTTTTTTTATGGAATAAAGCGACGACACTCGATAAAAGCCT
TATAAAAGACCATCCACAAGATGAGTCAAAAATCAAAACACTTACATGCT
GGCGGTTTATTAGGGCCGGAGAAATCACAACACTAAGTTATCAGATTCGA
AGATTTCAGAGAAGTGGACAAAATAAATCAGGTACTTGGGAAGAAGAATG
CATGCGCGGGAAATCCTCCGTCAGCGGAAATTGTCTGACCAGTTATATAA
GAGGCTGCAGGCATGCATAAAAATGCTACCAATGAAGATATCTCATTTGG
CTTCCCTGTGCGTCTCATTGGAGTTCGACCCTCGACTTCCTTTAAAAATG
CCTCATCATTCAGAAAAGATTCAGTTAAAGGAGTCGGGACGAACCAAGGT
GTGACAGAATTGGTCCTAATATTGTCTTGAGCCCACTCGCATGCCAAAAT
CCTCGCAAGATGGTTCATGGCTCCTTTCGTAGCTCCATATATGGATCCAG
CGTCAACAACTGACACCCCCCCACAAACAGAAGACATTAGAACAATACTT
GCTGCCCCCGAAGCTTTCAAAAGAGGATGTGCAAGTTGGCACAGATTGTA
AGCAGACTCAAAATTGGTAGCCATGAGAAACGAGAAATCTTCTGCTGTGT
ACTCCACAGTCGCCTTTCTTATAGTCGTCCCGACGTTGTTTATGAGAATG
TTAAGTTTTCCATCCAACAGAGAGGAGACTTGGTTTATAAGC
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