CN185542

Overview
NameCN185542
Unique NameCN185542
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG_STAES (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=fabG PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.239e-15
Identity = 48/168 (28.57%), Postives = 88/168 (52.38%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLND--EAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 711
            G +++L+NN G T     +    +++  ++ TN +  +N  Q   P +    + +I+ ++S+ G +      + Y ATK  +  L +  A E A   I  N+V P F+ + +T +  +D  +  L+++    P++R G+  +I++ VAFL    A YITGQTI  +GG
Sbjct:   79 GSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQAN-YVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDDLKDQMLEQI----PLKRFGEDTDIANTVAFLASDKAKYITGQTIHVNGG 241          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG_STAEQ (3-oxoacyl-[acyl-carrier-protein] reductase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=fabG PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.239e-15
Identity = 48/168 (28.57%), Postives = 88/168 (52.38%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLND--EAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 711
            G +++L+NN G T     +    +++  ++ TN +  +N  Q   P +    + +I+ ++S+ G +      + Y ATK  +  L +  A E A   I  N+V P F+ + +T +  +D  +  L+++    P++R G+  +I++ VAFL    A YITGQTI  +GG
Sbjct:   79 GSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQAN-YVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDDLKDQMLEQI----PLKRFGEDTDIANTVAFLASDKAKYITGQTIHVNGG 241          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: DHG3_BACME (Glucose 1-dehydrogenase 3 OS=Bacillus megaterium GN=gdhIII PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.239e-15
Identity = 53/184 (28.80%), Postives = 88/184 (47.83%), Query Frame = -2
Query:  193 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSI-----------YGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFPAHAFF 711
            G L+++INN G      + E + ++++ ++ TN   A+         L +  A    + + + G  +V++  S+           Y A+KG M  +   LA E+A   IR N++ P  + TP+      D     +VE   PM   GKP E++++ AFL    ASY+TG T+ ADGG   +  F
Sbjct:   84 GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAF---------LGSREAIKYFVENDIKG--NVINMSSVHEMIPWPLFVHYAASKGGMKQMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQASYVTGITLFADGGMTKYPSF 256          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: PECR_RAT (Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus norvegicus GN=Pecr PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.148e-15
Identity = 50/168 (29.76%), Postives = 77/168 (45.83%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLND--EAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 711
            GK+N L+NN G        + TA+ +  ++ TN    + +C+  +         SIV +  +        A S  GA +  + +L + +A  WA   +R N V P  + +        +  +   +      P +R G P EIS LV FL  PAAS+ITGQ I+ DGG
Sbjct:   99 GKINFLVNNAGGQFMAPAEDITAKGWQAVIETNLTGTFYMCKAVYNSWMKDHGGSIVNIIVLLNNGFPTAAHS--GAARAGVYNLTKTMALTWASSGVRINCVAPGTIYSQTAVDNYGELGQTMFEMAFENIPAKRVGLPEEISPLVCFLLSPAASFITGQLINVDGG 264          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG_CHLPN (3-oxoacyl-[acyl-carrier-protein] reductase OS=Chlamydia pneumoniae GN=fabG PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.148e-15
Identity = 59/180 (32.78%), Postives = 91/180 (50.56%), Query Frame = -2
Query:  214 VSSLLD--GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQ--LAHPLLKASGAASIVLMSSVCGGVSVVDAGSI-YGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEA---FLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 729
            V   LD   K++IL+NN G T     +  + +D+  +++TN  S Y  C   + H +   SG  SI+ ++S+   +    AG   Y A K  +    + LA E A  NIR N + P F+ T +T S LND     +LK +    P+ R G P +++ +  FL    +SY+T QT+  DGG
Sbjct:   75 VQKFLDKHNKIDILVNNAGITRDNLLMRMSEDDWQSVISTNLTSLYYTCSSVIRHMIKARSG--SIINVASIVAKIG--SAGQTNYAAAKAGIIAFTKSLAKEVAARNIRVNCLAPGFIETDMT-SVLNDNLKAEWLKSI----PLGRAGTPEDVARVALFLASQLSSYMTAQTLVVDGG 245          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG_AQUAE (3-oxoacyl-[acyl-carrier-protein] reductase OS=Aquifex aeolicus GN=fabG PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.064e-14
Identity = 56/173 (32.37%), Postives = 91/173 (52.60%), Query Frame = -2
Query:  214 QVSSLLDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 732
            ++ +L+DG ++IL+NN G T  K  +  +  D+  ++  N    + + Q +   +       IV +SSV G    V   + Y  TK  +    + LA E A  N+  N+V P F+ T +T + L++E   K  E + P+ R G P E++++V FLC   ASYITG+ I  +GG
Sbjct:   78 EIYNLVDG-IDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVN-YSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMT-AVLSEEIKQKYKE-QIPLGRFGSPEEVANVVLFLCSELASYITGEVIHVNGG 246          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: PECR_MOUSE (Peroxisomal trans-2-enoyl-CoA reductase OS=Mus musculus GN=Pecr PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.390e-14
Identity = 54/179 (30.17%), Postives = 81/179 (45.25%), Query Frame = -2
Query:  187 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLND--EAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG--FPAHAFFFP 711
            GK+N L+NN G        + TA+ +  ++ TN    + +C+  +         SIV +  +        A +  GA +  + +L + +A  WA   +R N V P  + +        +  +   +      P +R G P EIS LV FL  PAASYITGQ I+ DGG     HAF  P
Sbjct:   99 GKINFLVNNGGGQFMAPVEDITAKGWHAVIETNLTGTFYMCKEVYNSWMREHGGSIVNIIVLLNNGFPTAAHT--GAAREGVYNLTKSMALAWASSGVRINCVAPGTIYSQTAVDNYGEMGQTLFEMAFDSIPAKRLGVPEEISPLVCFLLSPAASYITGQLINVDGGQALYTHAFSIP 275          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG_BACSU (3-oxoacyl-[acyl-carrier-protein] reductase OS=Bacillus subtilis GN=fabG PE=3 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.390e-14
Identity = 49/166 (29.52%), Postives = 85/166 (51.20%), Query Frame = -2
Query:  214 LNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLND--EAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 705
            ++IL+NN G T     +    +++  ++  N +  +N  +     +    +  I+ +SS+ G VS     + Y A K  +  L +  A E A  NI  N++ P F+ T +T+    D  +  LK++    P+ R G+P+++SS+V FL    A Y+TGQT+  DGG
Sbjct:   83 IDILVNNAGITRDNLIMRMKEDEWDDVININLKGVFNCTKAVTRQMMKQRSGRIINVSSIVG-VSGNPGQANYVAAKAGVIGLTKSSAKELASRNITVNAIAPGFISTDMTDKLAKDVQDEMLKQI----PLARFGEPSDVSSVVTFLASEGARYMTGQTLHIDGG 243          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: DHGB_BACME (Glucose 1-dehydrogenase B OS=Bacillus megaterium GN=gdhB PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.390e-14
Identity = 58/186 (31.18%), Postives = 92/186 (49.46%), Query Frame = -2
Query:  193 LINQVSSLLD--GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAY-NLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFPAHAFF 741
            +IN V S +   GKL+++INN G     ++ E +  D++ ++ TN   A+    +     ++     +++ MSSV            Y A+KG M  +   LA E+A   IR N++ P  + TP+      D     +VE   PM   G+P EI++ VA+L    ASY+TG T+ ADGG   +  F
Sbjct:   73 VINLVQSAIKEFGKLDVMINNAGMENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEWKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAA-VAWLASSEASYVTGITLFADGGMTQYPSF 257          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: DHG4_BACME (Glucose 1-dehydrogenase 4 OS=Bacillus megaterium GN=gdhIV PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.390e-14
Identity = 53/184 (28.80%), Postives = 88/184 (47.83%), Query Frame = -2
Query:  193 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSI-----------YGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFPAHAFF 711
            G L+++INN G      + E + ++++ ++ TN   A+         L +  A    + + + G  +V++  S+           Y A+KG M  +   LA E+A   IR N++ P  + TP+      D     +VE   PM   GKP E++++ AFL    ASY+TG T+ ADGG   +  F
Sbjct:   84 GTLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAF---------LGSREAIKYFVENDIKG--NVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQASYVTGITLFADGGMTKYPSF 256          
The following BLAST results are available for this feature:
BLAST of CN185542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
FABG_STAES6.239e-1528.573-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
FABG_STAEQ6.239e-1528.573-oxoacyl-[acyl-carrier-protein] reductase OS=Stap... [more]
DHG3_BACME6.239e-1528.80Glucose 1-dehydrogenase 3 OS=Bacillus megaterium G... [more]
PECR_RAT8.148e-1529.76Peroxisomal trans-2-enoyl-CoA reductase OS=Rattus ... [more]
FABG_CHLPN8.148e-1532.783-oxoacyl-[acyl-carrier-protein] reductase OS=Chla... [more]
FABG_AQUAE1.064e-1432.373-oxoacyl-[acyl-carrier-protein] reductase OS=Aqui... [more]
PECR_MOUSE1.390e-1430.17Peroxisomal trans-2-enoyl-CoA reductase OS=Mus mus... [more]
FABG_BACSU1.390e-1429.523-oxoacyl-[acyl-carrier-protein] reductase OS=Baci... [more]
DHGB_BACME1.390e-1431.18Glucose 1-dehydrogenase B OS=Bacillus megaterium G... [more]
DHG4_BACME1.390e-1428.80Glucose 1-dehydrogenase 4 OS=Bacillus megaterium G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001I02_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001I02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185542 ID=CN185542; Name=CN185542; organism=Citrus sinensis; type=EST; length=742bp
TTTTTTTTTTTTTTTTTATGGAATAAAGCGACGACACTCGATAAAAGCCT
TATAAAAGACCATCCACAAGATGAGTCAAAAATCAAAACACTTACATGCT
GGCGGTTTATTAGGGCCGGAGAAATCACAACACTAAGTTATCAGATTCGA
AGATTTCAGAGAAGTGGACAAAATAAATCAGGTACTTGGGAAGAAGAATG
CATGCGCGGGAAATCCTCCGTCAGCGGAAATTGTCTGACCAGTTATATAA
GAGGCTGCAGGCATGCATAAAAATGCTACCAATGAAGATATCTCATTTGG
CTTCCCTGTGCGTCTCATTGGAGTTCGACCCTCGACTTCCTTTAAAAATG
CCTCATCATTCAGAAAAGATTCAGTTAAAGGAGTCGGGACGAACCAAGGT
GTGACAGAATTGGTCCTAATATTGTCTTGAGCCCACTCGCATGCCAAAAT
CCTCGCAAGATGGTTCATGGCTCCTTTCGTAGCTCCATATATGGATCCAG
CGTCAACAACTGACACCCCCCCACAAACAGAAGACATTAGAACAATACTT
GCTGCCCCCGAAGCTTTCAAAAGAGGATGTGCAAGTTGGCACAGATTGTA
AGCAGACTCAAAATTGGTAGCCATGAGAAACGAGAAATCTTCTGCTGTGT
ACTCCACAGTCGCCTTTCTTATAGTCGTCCCGACGTTGTTTATGAGAATG
TTAAGTTTTCCATCCAACAGAGAGGAGACTTGGTTTATAAGC
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