CN185542

Overview
NameCN185542
Unique NameCN185542
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: DHRS4_HUMAN (Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14
Identity = 49/172 (28.49%), Postives = 87/172 (50.58%), Query Frame = -2
Query:  205 LDGKLNILINNVGTT-IRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFPA 717
            L G ++IL++N        + ++ T E +   +  N ++   + +   P ++  G  S+V++SS+    S     S Y  +K A+  L + LA E A  NIR N + P  + T  +     D+   + ++    +RR G+P + + +V+FLC   ASYITG+T+   GG P+
Sbjct:   88 LHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAA-FSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSEDASYITGETVVVGGGTPS 258          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: DHB8_HUMAN (Estradiol 17-beta-dehydrogenase 8 OS=Homo sapiens GN=HSD17B8 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14
Identity = 49/177 (27.68%), Postives = 90/177 (50.85%), Query Frame = -2
Query:  214 LINQVSSLLDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGA-ASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 741
            L+ QV +      +++++  G T  +  +  + +D+  ++A N +  + + Q A   L ++G   SI+ +SS+ G V  V   + Y A+K  +  L +  A E  +  IR NSV P F+ TP+T+     +  + ++    PM   G P +++ +VAFL    + YITG ++   GG
Sbjct:   85 LLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTN-YAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV--PQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGG 258          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: DCXR_TRIRE (L-xylulose reductase OS=Trichoderma reesei GN=lxr1 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.897e-14
Identity = 54/177 (30.51%), Postives = 82/177 (46.33%), Query Frame = -2
Query:  211 INQVSSLLDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVS-VVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGF 738
            +NQV S   GK++  I N G T     V+ +A D+  ++  +        +      K  G  S+V+ +S+ G V+      + Y   K    HLAR LA EW +D  R NS++P ++ T L++    DE   +      PM R G   E+     +L   A+SY TG  I  DGG+
Sbjct:   91 VNQVVSDF-GKIDAFIANAGATANSGVVDGSASDWDHVIQVDLSGTAYCAKAVGAHFKKQGHGSLVITASMSGHVANYPQEQTSYNVAKAGCIHLARSLANEW-RDFARVNSISPGYIDTGLSDFI--DEKTQELWRSMIPMGRNGDAKELKGAYVYLVSDASSYTTGADIVIDGGY 263          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: MTDH_AGABI (NADP-dependent mannitol dehydrogenase OS=Agaricus bisporus GN=mtdH PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14
Identity = 55/184 (29.89%), Postives = 87/184 (47.28%), Query Frame = -2
Query:  214 INQVSSLLDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPL-LKASGAASIVLMSSVCGGVSVVDAGSI--------YGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 738
            I Q+ + L G ++ LI N G ++ K   E T EDF F+   N    +N C+    L L+     SIV+ SS+     +++  S+        Y ++K A ++L + LA EWA   IR N+++P +V T  T     D+          P+ R  +P E++     L    A+Y+TG     DGG
Sbjct:   80 IQQIDADL-GAISGLIANAGVSVVKPATELTHEDFKFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSS--QIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG 258          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG_CUPLA (3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic OS=Cuphea lanceolata GN=CLKR27 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14
Identity = 51/168 (30.36%), Postives = 84/168 (50.00%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSI-YGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCM-PAASYITGQTISADGG 711
            G ++IL+NN G T     +      +  ++  N    +   Q A  ++       I+ ++SV G V   +AG   Y A K  +    + +A E+A  NI  N+V P F+ + +T    +D    K++    P+ R G+P E++ LV FL + PA+SY+TGQ  + DGG
Sbjct:  154 GTVDILVNNAGITRDGLLMRMKKSQWQEVIDLNLTGVFLCTQAAAKIMMKKKKGRIINIASVVGLVG--NAGQANYSAAKAGVIGFTKTVAREYASRNINVNAVAPGFISSDMTSKLGDD--INKKILETIPLGRYGQPEEVAGLVEFLAINPASSYVTGQVFTIDGG 317          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG3_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 3, chloroplastic OS=Brassica napus GN=bkr3 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14
Identity = 48/167 (28.74%), Postives = 81/167 (48.50%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCM-PAASYITGQTISADGG 711
            G +++++NN G T     +      +  ++  N    +   Q A  ++       I+ ++SV G +  +   + Y A K  +   ++  A E A  NI  N V P F+ + +T     D    K++ G  P+ R G+P +++ LV FL + PAASYITGQ  + DGG
Sbjct:  149 GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQAN-YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDME--KKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGG 312          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG2_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 2, chloroplastic OS=Brassica napus GN=bkr2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14
Identity = 48/167 (28.74%), Postives = 81/167 (48.50%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCM-PAASYITGQTISADGG 711
            G +++++NN G T     +      +  ++  N    +   Q A  ++       I+ ++SV G +  +   + Y A K  +   ++  A E A  NI  N V P F+ + +T     D    K++ G  P+ R G+P +++ LV FL + PAASYITGQ  + DGG
Sbjct:  162 GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQAN-YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDME--KKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGG 325          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: FABG1_BRANA (3-oxoacyl-[acyl-carrier-protein] reductase 1, chloroplastic OS=Brassica napus GN=gbkr1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14
Identity = 48/167 (28.74%), Postives = 81/167 (48.50%), Query Frame = -2
Query:  214 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCM-PAASYITGQTISADGG 711
            G +++++NN G T     +      +  ++  N    +   Q A  ++       I+ ++SV G +  +   + Y A K  +   ++  A E A  NI  N V P F+ + +T     D    K++ G  P+ R G+P +++ LV FL + PAASYITGQ  + DGG
Sbjct:  154 GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQAN-YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDME--KKILGTIPLGRYGQPEDVAGLVEFLALSPAASYITGQAFTIDGG 317          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: DHG_BACSU (Glucose 1-dehydrogenase OS=Bacillus subtilis GN=gdh PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14
Identity = 52/173 (30.06%), Postives = 80/173 (46.24%), Query Frame = -2
Query:  193 GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGGFPAHAFF 711
            G L+I+INN G      + E   +D+  ++ TN   A+   + A      +     V+  S    V        Y A+KG +  +   LA E+A   IR N++ P  + TP+      D     +VE   PM   G+P EI+++ A+L    ASY+TG T+ ADGG   +  F
Sbjct:   84 GTLDIMINNAGLENPVPSHEMPLKDWDKVIGTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHEVIPWPLFVHYAASKGGIKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPKQKADVESMIPMGYIGEPEEIAAVAAWLASKEASYVTGITLFADGGMTQYPSF 256          
BLAST of CN185542 vs. ExPASy Swiss-Prot
Match: DHB8_PIG (Estradiol 17-beta-dehydrogenase 8 OS=Sus scrofa GN=HSD17B8 PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 9.008e-14
Identity = 51/177 (28.81%), Postives = 91/177 (51.41%), Query Frame = -2
Query:  214 LINQVSSLLDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGA-ASIVLMSSVCGGVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSVTPWFVPTPLTESFLNDEAFLKEVEGRTPMRRTGKPNEISSLVAFLCMPAASYITGQTISADGG 741
            L+ QV +      +++++  G T  +  +  + +D+  ++A N +  + + Q A   L +SG   SI+ +SS+ G V  +   + Y A+K  +  L + +A E  +  IR NSV P F+ TP+ +     +  L +V G  PM   G P +++ +VAFL    + YITG ++   GG
Sbjct:   83 LLEQVQAYFFRPPSVVVSCAGITRDEFLLRMSEDDWDKVIAVNLKGIFLVTQAAAQALVSSGCPGSIINISSIIGKVGNMGQTN-YAASKAGVIGLTQAVARELGRYRIRCNSVLPGFIKTPMAQKV--PQKVLDKVVGMIPMGHLGGPPDVADVVAFLASEDSGYITGASVEVTGG 256          
The following BLAST results are available for this feature:
BLAST of CN185542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
DHRS4_HUMAN6.897e-1428.49Dehydrogenase/reductase SDR family member 4 OS=Hom... [more]
DHB8_HUMAN6.897e-1427.68Estradiol 17-beta-dehydrogenase 8 OS=Homo sapiens ... [more]
DCXR_TRIRE6.897e-1430.51L-xylulose reductase OS=Trichoderma reesei GN=lxr1... [more]
MTDH_AGABI9.008e-1429.89NADP-dependent mannitol dehydrogenase OS=Agaricus ... [more]
FABG_CUPLA9.008e-1430.363-oxoacyl-[acyl-carrier-protein] reductase, chloro... [more]
FABG3_BRANA9.008e-1428.743-oxoacyl-[acyl-carrier-protein] reductase 3, chlo... [more]
FABG2_BRANA9.008e-1428.743-oxoacyl-[acyl-carrier-protein] reductase 2, chlo... [more]
FABG1_BRANA9.008e-1428.743-oxoacyl-[acyl-carrier-protein] reductase 1, chlo... [more]
DHG_BACSU9.008e-1430.06Glucose 1-dehydrogenase OS=Bacillus subtilis GN=gd... [more]
DHB8_PIG9.008e-1428.81Estradiol 17-beta-dehydrogenase 8 OS=Sus scrofa GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001I02_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001I02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185542 ID=CN185542; Name=CN185542; organism=Citrus sinensis; type=EST; length=742bp
TTTTTTTTTTTTTTTTTATGGAATAAAGCGACGACACTCGATAAAAGCCT
TATAAAAGACCATCCACAAGATGAGTCAAAAATCAAAACACTTACATGCT
GGCGGTTTATTAGGGCCGGAGAAATCACAACACTAAGTTATCAGATTCGA
AGATTTCAGAGAAGTGGACAAAATAAATCAGGTACTTGGGAAGAAGAATG
CATGCGCGGGAAATCCTCCGTCAGCGGAAATTGTCTGACCAGTTATATAA
GAGGCTGCAGGCATGCATAAAAATGCTACCAATGAAGATATCTCATTTGG
CTTCCCTGTGCGTCTCATTGGAGTTCGACCCTCGACTTCCTTTAAAAATG
CCTCATCATTCAGAAAAGATTCAGTTAAAGGAGTCGGGACGAACCAAGGT
GTGACAGAATTGGTCCTAATATTGTCTTGAGCCCACTCGCATGCCAAAAT
CCTCGCAAGATGGTTCATGGCTCCTTTCGTAGCTCCATATATGGATCCAG
CGTCAACAACTGACACCCCCCCACAAACAGAAGACATTAGAACAATACTT
GCTGCCCCCGAAGCTTTCAAAAGAGGATGTGCAAGTTGGCACAGATTGTA
AGCAGACTCAAAATTGGTAGCCATGAGAAACGAGAAATCTTCTGCTGTGT
ACTCCACAGTCGCCTTTCTTATAGTCGTCCCGACGTTGTTTATGAGAATG
TTAAGTTTTCCATCCAACAGAGAGGAGACTTGGTTTATAAGC
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