CN185539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.747e-16 Identity = 49/129 (37.98%), Postives = 76/129 (58.91%), Query Frame = 1 Query: 97 NYYAHCQRPDLVLGLKPHSDGTGYTIVLQDE-EGLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPEL---NKEIGPENGLINEECPRLFKN--MKDYANIH 465 +YY C +PDL LGL HSD + TI+LQD GLQVL D+ W VP + A++V +GD ++++TN F S HRV+ + R SV F++ L + GP +++EE P +++ + +YA + Sbjct: 221 HYYPPCPQPDLTLGLTKHSDNSFLTILLQDHIGGLQVLHDQYWVDVPPVPGALVVNVGDLLQLITNDKFISVEHRVLANVAGPRISVACFFSSYLMANPRVYGPIKEILSEENPPNYRDTTITEYAKFY 349
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16 Identity = 46/132 (34.85%), Postives = 74/132 (56.06%), Query Frame = 1 Query: 91 RFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEEG-LQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEECPRLF-----KNMKDYANIHW 468 R NYY CQRP LG PH D T TI+ QD G LQV + +W ++ ++A +V +GD ++NG +KS +HR V +++ R S+ F PE++K + P L++ PR + +++ D+ H+ Sbjct: 205 RLNYYPPCQRPMETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFFLCPEMDKVVAPPGTLVDAANPRAYPDFTWRSLLDFTQKHY 336
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.686e-16 Identity = 46/132 (34.85%), Postives = 73/132 (55.30%), Query Frame = 1 Query: 91 RFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEEG-LQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEECPRLF-----KNMKDYANIHW 468 R NYY CQRP LG PH D T TI+ QD G LQV + +W ++ ++A +V +GD ++NG +KS +HR V ++ R S+ F PE++K + P L++ PR + +++ D+ H+ Sbjct: 205 RLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVDASNPRAYPDFTWRSLLDFTQKHY 336
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16 Identity = 46/132 (34.85%), Postives = 73/132 (55.30%), Query Frame = 1 Query: 91 RFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEEG-LQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEECPRLF-----KNMKDYANIHW 468 R NYY CQRP LG PH D T TI+ QD G LQV + +W ++ ++A +V +GD ++NG +KS +HR V ++ R S+ F PE++K + P L++ PR + +++ D+ H+ Sbjct: 205 RLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVDAANPRAYPDFTWRSLLDFTQKHY 336
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15 Identity = 51/170 (30.00%), Postives = 91/170 (53.53%), Query Frame = 1 Query: 13 KAMAKSLKLEENCFLNQFGNQSQY--QARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDE-EGLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNK-EIGPENGLINEECPRLFKNMKDYANIHWEYYQKGQRALHTAK 510 KA++ L LE + + G + Q + NYY C +P+L LG++ H+D + T +L + GLQ+ + +W T + +++++ +GD +EI++NG +KS +HR + + EK R S VF P +K + P +++ E P F +I + + K Q L + K Sbjct: 185 KALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELVSEK 354
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.364e-15 Identity = 46/131 (35.11%), Postives = 70/131 (53.44%), Query Frame = 1 Query: 1 MITSKAMAKSLKLEENCFLNQFGNQSQYQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEEG-LQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEI 390 ++ K+ S +ENC N R N Y C +P V GL PH+D TI+ QD+ G LQ++KD +W V +A+++ +GD + +NG++KS HRV+T+ + ERFS F P + I Sbjct: 172 VLAEKSGQNSSFFKENCVRNTC------YLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQDQVGGLQLIKDNRWIAVKPNPKALIINIGDLFQAWSNGMYKSVEHRVMTNPKVERFSTAYFMCPSYDAVI 296
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.781e-15 Identity = 50/143 (34.97%), Postives = 77/143 (53.85%), Query Frame = 1 Query: 55 LNQFGNQ-SQYQARF-NYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEEGLQ--VLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGPENGLINEECPRLFK--NMKDYANIH 465 L F N+ SQ Q NYY C P LG H DG T++ QD GLQ ++KD W V I A +V +G ++++TN F+ +HRVVT ++R S+ P+ + I P L+N++ P L+K + ++A+I+ Sbjct: 184 LGYFDNELSQIQMMLTNYYPPCPDPSSTLGSGGHYDGNLITLLQQDLPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTDPTRDRVSIATLIGPDYSCTIEPAKELLNQDNPPLYKPYSYSEFADIY 326
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 45/124 (36.29%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 28 SLKLEENCFLNQFGNQSQYQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEEG-LQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGP 396 SL +E + F + S R NYY C P+ LG PH D T TI+LQD+ G L+VL D +W V + A+++ +GD ++NG +KS +HR V + +ER S+ F P ++ + P Sbjct: 210 SLGVERGYYREFFADSSSIM-RCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRP 332
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 45/124 (36.29%), Postives = 68/124 (54.84%), Query Frame = 1 Query: 28 SLKLEENCFLNQFGNQSQYQARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDEEG-LQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEIGP 396 SL +E + F + S R NYY C P+ LG PH D T TI+LQD+ G L+VL D +W V + A+++ +GD ++NG +KS +HR V + +ER S+ F P ++ + P Sbjct: 210 SLGVERGYYREFFADSSSIM-RCNYYPPCPEPERTLGTGPHCDPTALTILLQDDVGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFFLCPREDRVVRP 332
BLAST of CN185539 vs. ExPASy Swiss-Prot
Match: LDOX_PETHY (Leucoanthocyanidin dioxygenase OS=Petunia hybrida GN=ANT17 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 44/123 (35.77%), Postives = 69/123 (56.10%), Query Frame = 1 Query: 31 LKLEENCFLNQFGNQSQY--QARFNYYAHCQRPDLVLGLKPHSDGTGYTIVLQDE-EGLQVLKDEQWFTVPKISEAVLVLMGDQMEIMTNGIFKSPVHRVVTSAEKERFSVVVFYAPELNKEI 390 L LEE + G Q + NYY C +P+L LG++ H+D + T +L + GLQ+ + QW T + ++++ +GD +EI++NG +KS +HR V + EK RFS +F P K I Sbjct: 195 LGLEEGRLEKEVGGMEDLLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGQWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGVVNKEKVRFSWAIFCEPPKEKII 317 The following BLAST results are available for this feature:
BLAST of CN185539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185539 ID=CN185539; Name=CN185539; organism=Citrus sinensis; type=EST; length=670bpback to top |