CN185519

Overview
NameCN185519
Unique NameCN185519
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig121 contig Csv1_Contig121:435..1187. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRI2_TOBAC (Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.116e-43
Identity = 89/134 (66.42%), Postives = 104/134 (77.61%), Query Frame = -3
Query:  350 NIALRGLPXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 751
            N+AL+GL                  MEYQN RGGKVKL SI+ P SEFDHAE+GDALYAMELALSL KLTN+KLL+LH+VA RNND Q+A+FVES++L EQVEAI  I++YV+QLR VGKGHG+WHFDQMLL E
Sbjct:  121 NVALKGLARFFKESSEEERGHAEKLMEYQNKRGGKVKLQSILMPLSEFDHAEEGDALYAMELALSLAKLTNQKLLNLHAVATRNNDVQLADFVESKYLREQVEAIKMISEYVAQLRRVGKGHGVWHFDQMLLQE 254          
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRI2_ARATH (Ferritin-2, chloroplastic OS=Arabidopsis thaliana GN=FER2 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 9.444e-43
Identity = 87/134 (64.93%), Postives = 102/134 (76.12%), Query Frame = -3
Query:  350 NIALRGLPXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 751
            N+ L+G                  FMEYQN RGG+VKL SI+ P SEFDH EKGDAL+AMELALSLEKLTNEKLL L SV  +NND Q+ +FVESEFLGEQVEAI KI++YV+QLR +GKGHG+WHFDQMLL++
Sbjct:  118 NVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVSEFDHEEKGDALHAMELALSLEKLTNEKLLKLQSVGVKNNDVQLVDFVESEFLGEQVEAIKKISEYVAQLRRIGKGHGVWHFDQMLLND 251          
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRI1_TOBAC (Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=FER1 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.104e-42
Identity = 86/138 (62.32%), Postives = 106/138 (76.81%), Query Frame = -3
Query:  338 NIALRGLPXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGDAA 751
            N+AL+GL                  ME+QN RGG+VKL SI  PP+EFDH EKGDALYAMELAL LEKLTN++LL+LH+VA R+ND  +A+F+ESEFL EQV+AI KI++YV+QLR VG+GHG+W FDQMLL+EG AA
Sbjct:  114 NVALKGLAKFFKESSLEEREHAEKLMEFQNKRGGRVKLLSICAPPTEFDHCEKGDALYAMELALCLEKLTNQRLLNLHAVASRSNDVHLADFLESEFLVEQVDAIKKISEYVAQLRRVGQGHGVWQFDQMLLNEGAAA 251          
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRI1_PEA (Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 2.104e-42
Identity = 84/133 (63.16%), Postives = 99/133 (74.44%), Query Frame = -3
Query:  353 NIALRGLPXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLH 751
            N+AL+G                   M+YQN RGG+V LH I   PSEF+H EKGDALYAMELALSLEKLTNEKLL++HSVA+RNND +M  F+E E+L EQVEAI KI++YV+QLR VGKGHG+WHFDQ LLH
Sbjct:  116 NVALKGFAKFFKESSEEHREHAEKLMKYQNTRGGRVVLHPIKDVPSEFEHVEKGDALYAMELALSLEKLTNEKLLNVHSVAERNNDLEMTHFIEGEYLAEQVEAIKKISEYVAQLRRVGKGHGVWHFDQRLLH 248          
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRI1_MAIZE (Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.748e-42
Identity = 86/134 (64.18%), Postives = 100/134 (74.63%), Query Frame = -3
Query:  350 NIALRGLPXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 751
            N+AL+G                   MEYQN RGG+V+L SI+ P +EFDH EKGDALYAMELAL+LEKL NEKL +LH VA R NDPQ+ +F+ESEFL EQ EAINKI+KYV+QLR VGKGHG+WHFDQMLL E
Sbjct:  119 NVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVTPLTEFDHPEKGDALYAMELALALEKLVNEKLHNLHGVATRCNDPQLTDFIESEFLEEQGEAINKISKYVAQLRRVGKGHGVWHFDQMLLEE 252          
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRI3_ARATH (Ferritin-3, chloroplastic OS=Arabidopsis thaliana GN=FER3 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.326e-41
Identity = 85/132 (64.39%), Postives = 99/132 (75.00%), Query Frame = -3
Query:  356 NIALRGLPXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLL 751
            N+AL+GL                  MEYQN RGG+VKL  ++ P SEFDH EKGDALYAMELALSLEKL NEKLL+LHSVA +N+D Q+A+F+ES FL EQVEAI KI++YVSQLR +GKGHG WHFDQ LL
Sbjct:  124 NVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQSEFDHPEKGDALYAMELALSLEKLVNEKLLNLHSVASKNDDVQLADFIESVFLNEQVEAIKKISEYVSQLRRLGKGHGTWHFDQELL 255          
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRI4_ARATH (Ferritin-4, chloroplastic OS=Arabidopsis thaliana GN=FER4 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.038e-41
Identity = 85/132 (64.39%), Postives = 99/132 (75.00%), Query Frame = -3
Query:  356 NIALRGLPXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLL 751
            NIAL+GL                  MEYQN RGG+VKL SI+ P SEF+H +KGDALY MELALSLEKL NEKLL+LHSVA +NND  +A+F+ESEFL EQVEAI  I++YV+QLR VGKGHG WHF+QMLL
Sbjct:  126 NIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDVHLADFIESEFLTEQVEAIKLISEYVAQLRRVGKGHGTWHFNQMLL 257          
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRI2_MAIZE (Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.508e-40
Identity = 85/135 (62.96%), Postives = 99/135 (73.33%), Query Frame = -3
Query:  350 NIALRGLPXXXXXXXXXXXXXXXXFMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVG-KGHGLWHFDQMLLHE 751
            N+AL+G                   MEYQN RGG+V+L SI+ P +EFDH EKGDALYAMEL L+LEKL NEKL SLH VA R NDPQ+ +F+ESEFL EQ EAINK++KYV+QLR VG KGHG+WHFDQMLL E
Sbjct:  116 NVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVAPLTEFDHPEKGDALYAMELTLALEKLVNEKLHSLHGVATRCNDPQLIDFIESEFLEEQGEAINKVSKYVAQLRRVGNKGHGVWHFDQMLLQE 250          
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRIS_LYMST (Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 7.282e-19
Identity = 49/107 (45.79%), Postives = 71/107 (66.36%), Query Frame = -3
Query:  356 MEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLL 676
            M+YQN RGG++ L  I +P    D  E G  L AM++AL LEK  N+ LL LH +   ++D QMA+F+ESEFL EQV++I +++ Y++ L+ VG G G + FD+  L
Sbjct:   68 MKYQNKRGGRIVLQDIKKP----DRDEWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLESEFLEEQVKSIKELSDYITNLKRVGPGLGEYIFDKETL 170          
BLAST of CN185519 vs. ExPASy Swiss-Prot
Match: FRIH_ECHGR (Ferritin heavy chain OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.164e-18
Identity = 50/111 (45.05%), Postives = 67/111 (60.36%), Query Frame = -3
Query:  344 MEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAEFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGD 676
            M YQ  RGG++    I +P +     E    L AME+AL +E+  NE LL+L  VA++NND Q  EF+E EFLGEQV  I K+A YV+ L+  G G G + FD+  L  G+
Sbjct:   66 MRYQCGRGGRIVYQDIAKPQT----TEWASGLEAMEMALKIEREVNESLLALRGVANKNNDSQFCEFLEGEFLGEQVSDIKKLAGYVTNLKRCGPGLGEYIFDKETLQGGE 172          
The following BLAST results are available for this feature:
BLAST of CN185519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
FRI2_TOBAC1.116e-4366.42Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI2_ARATH9.444e-4364.93Ferritin-2, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_TOBAC2.104e-4262.32Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI1_PEA2.104e-4263.16Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV... [more]
FRI1_MAIZE2.748e-4264.18Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1... [more]
FRI3_ARATH2.326e-4164.39Ferritin-3, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI4_ARATH3.038e-4164.39Ferritin-4, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI2_MAIZE1.508e-4062.96Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1... [more]
FRIS_LYMST7.282e-1945.79Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2[more]
FRIH_ECHGR6.164e-1845.05Ferritin heavy chain OS=Echinococcus granulosus PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001H14_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001H14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185519 ID=CN185519; Name=CN185519; organism=Citrus sinensis; type=EST; length=753bp
CCCCCTTTTTTAGGCAGAAACAGAACTTTTATTGAACAACTTAATTATAT
TTATACCCTCAGAAGATGGATTTGGTGCTCTGCTTAAACTATTAGATCCC
TTCACACAGTCTGTTACTAAATAAAGAAAAAGCACCATCAAAAAGACTAT
CTAAATGCGACCACACTAATATGATAAAGCAAGGAGGCTATTGAGTATTA
ACTTTGTAGGACTTAACACTGTTTCAGCTTATTTTTTGTCAACACACTCA
ACCTCCTGTGGCAGAGATACTTCAGAACATTTGGCAGAAAAGAGTTGACT
AAAGCACAAAGAAATGTAACAATATGGTTCTTCATCATGCAGCATCACCC
TCGTGGAGAAGCATTTGATCGAAGTGCCATAATCCGTGGCCTTTCCCAAC
CATCCTCAGTTGAGAAACATATTTTGCGATCTTGTTAATTGCTTCAACCT
GCTCACCCAAAAATTCACTCTCGACAAACTCTGCCATTTGGGGATCATTG
TTTCTATCCGCCACACTGTGCAGGCTCAGAAGCTTCTCGTTTGTTAGCTT
CTCCAGGGACAATGCTAGTTCCATTGCATACAAGGCATCCCCTTTCTCCG
CATGATCAAACTCCGAAGGGGGCTGCATTATGGAGTGCAGTTTTACTTTT
CCACCGCGCAAGTTCTGATACTCCATAAACTTCTCAGCATGTTCCCTTTC
TTCTTCACTGGACTCCTTGAAAAATTTGGGCAGGCCTCTCAGAGCAATAT
TAT
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