CN185510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185510 vs. ExPASy Swiss-Prot
Match: TPIS_BACV8 (Triosephosphate isomerase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=tpiA PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.314e-40 Identity = 97/223 (43.50%), Postives = 126/223 (56.50%), Query Frame = 1 Query: 31 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSL-RPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAD-RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAA 693 RK V GNWK N +E + LNE F+ L V + + V A+NC K GA+TGE+SAEM+ + G +VILGHSERR +E+ E + +KV AL+ LK I C+GE LE+REA +VVAAQ ++ +S I+LAYEPVWAIGTGK AT QAQE+H +R + E+A T I+YGGS +N KEL A Sbjct: 2 RKNIVAGNWKMNKNLQEGIALAKELNEALAADKPNCDVVICTPFIHLASVTPIVDKAVIGVGAENCADKVSGAYTGEVSAEMVASTGAEYVILGHSERRAYYHETVEILEEKVKLALANNLKPIFCIGEVLEEREANKQNEVVAAQLASVFSLSAEDFSKIILAYEPVWAIGTGKTATAEQAQEIHAFIRSLIADKYGKEVADNTSILYGGSCKPSNAKELFA 224
BLAST of CN185510 vs. ExPASy Swiss-Prot
Match: TPIS_CHLPD (Triosephosphate isomerase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=tpiA PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.716e-40 Identity = 103/223 (46.19%), Postives = 122/223 (54.71%), Query Frame = 1 Query: 31 RKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKEL 687 RK V GNWK N T E ++ + L EG + L S L + AQNC + GAFTGE+SA M+ G VI GHSERR E+N V KV +ALS+GL+VI C GETLEQRE G T DVV AQ + + SNIV+AYEPVWAIGTGK AT QA+EVH +R + E A RI YGGSV +N KEL Sbjct: 2 RKKIVVGNWKMNKTVTESLVLAAEVTAALGEGFTGCDVGIAPPFTALYEVGKLTGSRLA----LVAQNCHFEPDGAFTGEVSASMVREAGCSAVIAGHSERRHCFGETNAIVNRKVKHALSEGLQVIMCAGETLEQREGGVTGDVVTAQVREGLLGIDDISNIVIAYEPVWAIGTGKTATSEQAEEVHLLIRNTVSDLFGEEAAGRLRIQYGGSVKPSNAKEL 220
BLAST of CN185510 vs. ExPASy Swiss-Prot
Match: TPIS_CHLT3 (Triosephosphate isomerase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=tpiA PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.241e-40 Identity = 105/226 (46.46%), Postives = 132/226 (58.41%), Query Frame = 1 Query: 31 RKFFVGGNWKCN----GTPEEVKKIVSVL-NEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTK-AIAD-RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKEL 687 RK FV GNWK N G +I+ +L +E +F + +S+++ +AAQNC+ + GA+TGEISA ML N G +VILGHSERR NE++E V KV ALS L VI CVGETLEQRE+G T VV Q + + D ++V+AYEPVWAIGTGK ATP QAQEVH +R + E+A RI YGGSV +N KEL Sbjct: 2 RKKFVAGNWKMNKDLLGAVSLATEILQLLGDEAPTCEVAIAPTFLCQQAVFQVIDESAIK----LAAQNCFYEDQGAYTGEISAAMLRNSGCEYVILGHSERRQYFNETDEIVNKKVKNALSVELDVIMCVGETLEQRESGVTKSVVETQVRGGLKDLTAEDMKSVVIAYEPVWAIGTGKTATPEQAQEVHAFIRGIVKDMFGEEVANELRIQYGGSVKTSNAKEL 223
BLAST of CN185510 vs. ExPASy Swiss-Prot
Match: TPIS_ALCBS (Triosephosphate isomerase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=tpiA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.927e-40 Identity = 92/225 (40.89%), Postives = 135/225 (60.00%), Query Frame = 1 Query: 25 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAA 693 M R V GNWK NG K +++ + + F +L +S++ + +QN ++ GAFTGE+SA ML +G +VI+GHSERR + E++ + K A+A + GL I CVGETLE+R++G+T +V Q +A+ D V++++N ++AYEPVWAIGTGK A+P QAQ VH LR++L A P+IA + R++YGGSV N L A Sbjct: 1 MNRTPLVAGNWKMNGR----KDLLTEMADALAGYAGAAEVVICPPFPYLAAARSAMPGAVGIGSQNVSEQEDGAFTGEVSAPMLAEVGCGYVIIGHSERRALYGETDAQIASKFAHAQAAGLVPILCVGETLEERDSGNTDTIVCGQLRAVVDAVGVAAFANAIVAYEPVWAIGTGKTASPEQAQAVHACLRQFL-AKDDPDIAQSLRLLYGGSVKADNAALLFA 220
BLAST of CN185510 vs. ExPASy Swiss-Prot
Match: TPIS_PARD8 (Triosephosphate isomerase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=tpiA PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.516e-40 Identity = 97/224 (43.30%), Postives = 127/224 (56.70%), Query Frame = 1 Query: 31 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPD-FHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAA 693 RK V GNWK N T E + L+E F L V +++ + VAA+NC K+ GA+TGE+SA M+ + G +VILGHSERR +E+ E + KV AL+ GL I C+GE LE+REAG +VV AQ +S+ + I+LAYEPVWAIGTGK A+ QA+E+H +R L A E+A I+YGGS N N KEL A Sbjct: 2 RKNIVAGNWKMNTTLAEGLALAKGLDEALKGKTPNCDVIIGTPFTHLASVAAAIDTNKIGVAAENCADKEKGAYTGEVSAAMVASTGAKYVILGHSERRAYYHETPEILKTKVELALANGLTPIFCIGEVLEEREAGKHFEVVDAQIAGSLFDLSAEDFGKIILAYEPVWAIGTGKTASAEQAEEIHAHIRATLAAKYGNEVADNCTILYGGSCNAGNAKELFA 225
BLAST of CN185510 vs. ExPASy Swiss-Prot
Match: TPIS_CLOTH (Triosephosphate isomerase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=tpiA PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.453e-39 Identity = 97/223 (43.50%), Postives = 127/223 (56.95%), Query Frame = 1 Query: 25 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKEL 687 M RK GNWK N TP+E + V L +G+ G+V+++ + VAAQN ++ GAFTGE+S ML LG+ +VI+GHSERR E++E V KV A GLK I CVGE+L QRE G T ++V Q K +S+ V+AYEP+WAIGTGK AT QA+EV +R+ + ++A A RI YGGSVN AN EL Sbjct: 1 MSRKVIAAGNWKMNKTPKEAVEFVQAL-KGRVADADTEVVVGVPFVCLPGVVEAAKGSNIKVAAQNMHWEEKGAFTGEVSGPMLAELGVDYVIIGHSERRQYFGETDETVNKKVHAAFKYGLKPIICVGESLTQREQGVTAELVRYQVKIALLGLSAEQVKEAVIAYEPIWAIGTGKTATNEQAEEVCGIIRECIKELYGQDVAEAIRIQYGGSVNAANAAEL 222
BLAST of CN185510 vs. ExPASy Swiss-Prot
Match: TPIS_METCA (Triosephosphate isomerase OS=Methylococcus capsulatus GN=tpiA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.226e-39 Identity = 98/224 (43.75%), Postives = 126/224 (56.25%), Query Frame = 1 Query: 31 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAD--RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAA 693 R+ V GNWK NG V ++++ + G F+++ L+ + AQN GAFTGEISA ML G I+GHSERRL+ ESNE V + A+ LK I CVGETLEQRE G T+ V+ AQ + + V S + V+AYEPVWA+GTG+ AT QAQEVH+ +R L A +PE+A A +IIYGGSV N EL A Sbjct: 2 RRPLVVGNWKMNGRSASVARLLNDILAG--IGDCKAEVGVCVPFVYIPQASEILKGTKVMLGAQNVADHNSGAFTGEISAGMLREFGCELAIVGHSERRLLYGESNELVASRYEQAIQGHLKPILCVGETLEQREQGRTLAVIGAQIDTVFEFAGVQSLEHAVIAYEPVWAVGTGRSATTGQAQEVHYHIRS-LIARWNPEVAQAVQIIYGGSVKPENSAELFA 222
BLAST of CN185510 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPG (Triosephosphate isomerase OS=Pseudomonas putida (strain GB-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.415e-39 Identity = 95/223 (42.60%), Postives = 133/223 (59.64%), Query Frame = 1 Query: 31 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVK-KGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKEL 687 R+ V GNWK +GT V ++ L+ LF+ V L + V AQN V+ + GA TGE++ E LV G V++GHSERR ++ E++E + K A A ++GLK + C+GETLE+REAG T++VV Q +I + V +++N V+AYEPVWAIGTG ATP QAQ+VH +R L A + E+AA +++YGGSV AN EL Sbjct: 2 RRPMVAGNWKMHGTRASVAELTEGLSN--LALPSGVEVAVFPPALFINQVIDGLAGKEITVGAQNSAVQPEQGALTGEVAPEQLVEAGCKLVLIGHSERRQVIGETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEVVGRQLSSIIEAFGVKAFANAVIAYEPVWAIGTGLTATPQQAQDVHAAIRGQLAAEDA-EVAAKVQLLYGGSVKAANAAEL 221
BLAST of CN185510 vs. ExPASy Swiss-Prot
Match: TPIS_PSEF5 (Triosephosphate isomerase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=tpiA PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.230e-38 Identity = 98/223 (43.95%), Postives = 130/223 (58.30%), Query Frame = 1 Query: 31 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVKK-GGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKEL 687 R+ V GNWK +GT V ++++ L L++ V L+ V AQN V+ GA TGEI+ LV+ G V++GHSERRLI+ E + + K A A + GLK + CVGETLEQREAG T++VV Q +I + V +++N V+AYEPVWAIGTG ATP QAQ+VH +R L A S E+A R++YGGSV AN EL Sbjct: 2 RRPMVAGNWKMHGTRASVAELINGLRH--LALPSGVDVAVFPPCLYINQVIDGLKGKSIQVGAQNSAVESMQGALTGEIAPSQLVDAGCSLVLVGHSERRLIMGERDATLNRKFAAAQACGLKPVLCVGETLEQREAGKTLEVVGRQLGSIIEELGVGAFANAVIAYEPVWAIGTGLTATPQQAQDVHAAIRAQLAAENS-EVARGVRLLYGGSVKAANAVEL 221
BLAST of CN185510 vs. ExPASy Swiss-Prot
Match: TPIS_CHLCH (Triosephosphate isomerase OS=Chlorobium chlorochromatii (strain CaD3) GN=tpiA PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.606e-38 Identity = 98/222 (44.14%), Postives = 122/222 (54.95%), Query Frame = 1 Query: 31 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLV-KSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAA 693 RK V GNWK N +++ + L FL L K + AQNC + GA+TGE+SA ML G VI+GHSERR E+N V +V AL++GL VI CVGETL +RE+G T D+V+AQ + VS SN+V+AYEPVWAIGTGK AT AQA+EVH +R + A A RI YGGSV +N EL A Sbjct: 2 RKKIVVGNWKMNNGVAASEQLAADLLAALGSSFTGCDVGIAPTFLSLTTAGKVIAGSTIQLVAQNCHYENDGAYTGEVSAAMLKGAGCSSVIIGHSERRQFFGETNATVNLRVKKALAEGLDVILCVGETLAERESGVTGDIVSAQVREGLVGVSDISNVVIAYEPVWAIGTGKTATSAQAEEVHLMIRTLVTELYGEPAAQALRIQYGGSVKPSNAVELFA 223 The following BLAST results are available for this feature:
BLAST of CN185510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185510 ID=CN185510; Name=CN185510; organism=Citrus sinensis; type=EST; length=693bpback to top |