CN185501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: DHSB3_ARATH (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial OS=Arabidopsis thaliana GN=SDH2-3 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 3.389e-64 Identity = 118/178 (66.29%), Postives = 138/178 (77.53%), Query Frame = 1 Query: 28 IKSEIDPSLTFRRSRCEGICGSCAMNIDGCNGLACLTKISPSGSASTI-TPLPHMFVIKDLVVDMTNVYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPR 555 IK+E D SL++RRS EGICGSC+MNIDG N +ACL I+P+ S TI TPLPHM+VIKDLVVD+TN Y QYKS+EPWLK + PP G+E QS KDR KLDG+YECILCACC+TSCPSYWW E + GPAALL A WISDSRDEY +ERL+AI + E K+YRC I NC CP+ Sbjct: 106 IKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKTRKPPK-DGREHRQSPKDRKKLDGLYECILCACCTTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEYREERLQAITESETKVYRCRAIKNCTATCPK 282 HSP 2 Score: 23.0978 bits (48), Expect = 3.389e-64 Identity = 9/18 (50.00%), Postives = 11/18 (61.11%), Query Frame = 3 Query: 549 PKGLNPGKQIINIKQLQL 602 PKGLNP I+ +K L Sbjct: 281 PKGLNPASAILKMKSKHL 298
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: DHSB_MYCGR (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Mycosphaerella graminicola GN=SDH2 PE=3 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 4.420e-64 Identity = 116/177 (65.54%), Postives = 136/177 (76.84%), Query Frame = 1 Query: 28 IKSEIDPSLTFRRSRCEGICGSCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNVYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPR 555 IK+E+DP+LTFRRS EGICGSCAMNIDG N LACL +I + T I PLPH +V+KDLV DMT Y QYKSI+P+L+R PP GKE QS DR KLDG+YECILCACCSTSCPSYWW SE YLGPA LL + WI+DSRDE T +R +A+++ LYRCHTILNC+R CP+ Sbjct: 103 IKNEVDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTAKETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPYLQRDTAPP-DGKENRQSVADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVLLQSYRWINDSRDEKTAQRKDALNNSMSLYRCHTILNCSRTCPK 278 HSP 2 Score: 21.9422 bits (45), Expect = 4.420e-64 Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 3 Query: 549 PKGLNPGKQIINIKQ 593 PKGLNP I IK+ Sbjct: 277 PKGLNPALAIAEIKK 291
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: DHSB_UROFA (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Uromyces fabae GN=SDH2 PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 7.520e-64 Identity = 113/177 (63.84%), Postives = 133/177 (75.14%), Query Frame = 1 Query: 28 IKSEIDPSLTFRRSRCEGICGSCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNVYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPR 555 IK+E+DP+LTFRRS EGICGSCAMNIDG N LACL +I+ SA I PLPHM++IKDLV DMT+ Y QYKSIEP+LK NPP E QS +DR KLDGMYECILCACCSTSCPSYWW + YLGPA L+ A W++DSRD Y ++R E + + LYRCHTI NC + CP+ Sbjct: 91 IKNELDPTLTFRRSCREGICGSCAMNIDGVNTLACLKRINKETSAPVKIYPLPHMYIIKDLVPDMTHFYKQYKSIEPFLKNDNPPAQG--EFLQSPEDRKKLDGMYECILCACCSTSCPSYWWNQDEYLGPAVLMQAYRWMADSRDSYGEDRKEKLQNTLSLYRCHTIFNCTKTCPK 265 HSP 2 Score: 24.6386 bits (52), Expect = 7.520e-64 Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 3 Query: 549 PKGLNPGKQIINIKQ 593 PKGLNP K I +IK+ Sbjct: 264 PKGLNPAKAISHIKR 278
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: DHSB_SCHPO (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Schizosaccharomyces pombe GN=sdh2 PE=2 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 7.529e-64 Identity = 111/176 (63.07%), Postives = 131/176 (74.43%), Query Frame = 1 Query: 28 IKSEIDPSLTFRRSRCEGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNVYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPR 555 IK+E DP+LTFRRS EGICGSCAMNI+G N LAC+ I + I PLPH F++KDLV D+T Y QYKSIEPWL+ N P KE QS+ DRAKLDG+YECILCACCSTSCPSYWW SE YLGPA L+ A WI DSRD+ T +RL+ + + +YRCHTI+NCAR CP+ Sbjct: 61 IKNEQDPTLTFRRSCREGICGSCAMNINGSNTLACICNIKKDNKPTKIYPLPHCFIVKDLVPDLTYFYKQYKSIEPWLQNDNIPK--DKEFYQSRADRAKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVLMQAYRWIIDSRDQATAKRLDVMQNSMSVYRCHTIMNCARTCPK 234 HSP 2 Score: 24.6386 bits (52), Expect = 7.529e-64 Identity = 10/16 (62.50%), Postives = 11/16 (68.75%), Query Frame = 3 Query: 549 PKGLNPGKQIINIKQL 596 PKGLNPG I +K L Sbjct: 233 PKGLNPGLAIAKVKAL 248
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: DHSB_RAT (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Rattus norvegicus GN=Sdhb PE=2 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 9.805e-64 Identity = 111/177 (62.71%), Postives = 134/177 (75.71%), Query Frame = 1 Query: 28 IKSEIDPSLTFRRSRCEGICGSCAMNIDGCNGLACLTKISPS-GSASTITPLPHMFVIKDLVVDMTNVYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPR 555 IK+EID +LTFRRS EGICGSCAMNI+G N LAC +I G S I PLPHM+VIKDLV D++N Y QYKSIEP+LK+K+ ++ QS +DR KLDG+YECILCACCSTSCPSYWW + YLGPA L+ A W+ DSRDE+T+ERL + D F LYRCHTI+NC + CP+ Sbjct: 81 IKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDEFTEERLAKLQDPFSLYRCHTIMNCTQTCPK 257 HSP 2 Score: 27.7202 bits (60), Expect = 9.805e-64 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3 Query: 549 PKGLNPGKQIINIKQL 596 PKGLNPGK I IK++ Sbjct: 256 PKGLNPGKAIAEIKKM 271
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: DHSB_DROME (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Drosophila melanogaster GN=SdhB PE=2 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 1.278e-63 Identity = 112/179 (62.57%), Postives = 137/179 (76.54%), Query Frame = 1 Query: 28 IKSEIDPSLTFRRSRCEGICGSCAMNIDGCNGLACLTKISPSGSAST-ITPLPHMFVIKDLVVDMTNVYNQYKSIEPWLKRKNPP-PMPGK-EIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPR 555 IK+E+DP+LTFRRS EGICGSCAMNI G N LAC++KI + S S + PLPHM+V++DLV DM N Y QY++I+PWL+RKN GK + QS +DR+KLDG+YECILCACCSTSCPSYWW +E YLGPA L+ A WI DSRDE + ERL + D F +YRCHTI+NC R CP+ Sbjct: 86 IKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMNNFYEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLNKLKDPFSVYRCHTIMNCTRTCPK 264 HSP 2 Score: 27.335 bits (59), Expect = 1.278e-63 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3 Query: 549 PKGLNPGKQIINIKQL 596 PKGLNPG+ I IK+L Sbjct: 263 PKGLNPGRAIAEIKKL 278
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: DHSB_RICFE (Succinate dehydrogenase iron-sulfur subunit OS=Rickettsia felis GN=sdhB PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.823e-63 Identity = 111/176 (63.07%), Postives = 132/176 (75.00%), Query Frame = 1 Query: 28 IKSEIDPSLTFRRSRCEGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNVYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPR 555 IK+EID +LTFRRS EGICGSC+MNIDG N LAC+ I I PLPHM V+KDLV DM++ Y QY+SIEPWLK +P P + + QS K R KLDG+YECILCACCSTSCPSYWW + YLGPA LL A WI+DSRD++T ERLE ++D KLYRCHTI+NC + CP+ Sbjct: 66 IKNEIDSTLTFRRSCREGICGSCSMNIDGTNTLACIKPIEEISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIEPWLKTDSPTPSNSERL-QSIKGREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQAYRWIADSRDDHTGERLEDLEDPSKLYRCHTIMNCTKTCPK 240 HSP 2 Score: 25.409 bits (54), Expect = 4.823e-63 Identity = 12/20 (60.00%), Postives = 13/20 (65.00%), Query Frame = 3 Query: 549 PKGLNPGKQIINIKQLQLKR 608 PKGLNP K I IK L +R Sbjct: 239 PKGLNPAKAIGKIKSLIAER 258
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: DHSB_HUMAN (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Homo sapiens GN=SDHB PE=1 SV=3) HSP 1 Score: 234.187 bits (596), Expect = 1.069e-62 Identity = 108/177 (61.02%), Postives = 134/177 (75.71%), Query Frame = 1 Query: 28 IKSEIDPSLTFRRSRCEGICGSCAMNIDGCNGLACLTKISPS-GSASTITPLPHMFVIKDLVVDMTNVYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPR 555 IK+E+D +LTFRRS EGICGSCAMNI+G N LAC +I + S I PLPHM+VIKDLV D++N Y QYKSIEP+LK+K+ ++ QS ++R KLDG+YECILCACCSTSCPSYWW + YLGPA L+ A W+ DSRD++T+ERL + D F LYRCHTI+NC R CP+ Sbjct: 79 IKNEVDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTRTCPK 255 HSP 2 Score: 27.7202 bits (60), Expect = 1.069e-62 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3 Query: 549 PKGLNPGKQIINIKQL 596 PKGLNPGK I IK++ Sbjct: 254 PKGLNPGKAIAEIKKM 269
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: DHSB_BOVIN (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial OS=Bos taurus GN=SDHB PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 1.069e-62 Identity = 110/177 (62.15%), Postives = 135/177 (76.27%), Query Frame = 1 Query: 28 IKSEIDPSLTFRRSRCEGICGSCAMNIDGCNGLACLTKISPSGS-ASTITPLPHMFVIKDLVVDMTNVYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPR 555 IK+EID +LTFRRS EGICGSCAMNI+G N LAC +I + S S I PLPHM+VIKDLV D++N Y QYKSIEP+LK+K+ ++ QS +DR KLDG+YECILCACCSTSCPSYWW + YLGPA L+ A W+ DSRD++T+ERL + D F LYRCHTI+NC + CP+ Sbjct: 79 IKNEIDSTLTFRRSCREGICGSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLKKKDESQGGKEQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDFTEERLAKLQDPFSLYRCHTIMNCTQTCPK 255 HSP 2 Score: 27.7202 bits (60), Expect = 1.069e-62 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3 Query: 549 PKGLNPGKQIINIKQL 596 PKGLNPGK I IK++ Sbjct: 254 PKGLNPGKAIAEIKKM 269
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: DHSB_RECAM (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit OS=Reclinomonas americana GN=SDH2 PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.463e-62 Identity = 111/176 (63.07%), Postives = 131/176 (74.43%), Query Frame = 1 Query: 28 IKSEIDPSLTFRRSRCEGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNVYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPR 555 IK+E D +LTFRRS EG+CGSCAMNIDG N LAC+ I + I PLPHM +IKDLV D++N Y QYKSIEPW+K KE QS+ DR KLDG+YEC+LCACCSTSCPSYWW S+ YLGPA LL A WI DSRD+ T+ERL+ ++D FKLYRCHTILNC + CP+ Sbjct: 47 IKNEQDSTLTFRRSCREGVCGSCAMNIDGTNTLACIKSIDTNKKEMKIYPLPHMHIIKDLVPDLSNFYAQYKSIEPWMKTTEKKL--DKEFYQSRNDREKLDGLYECVLCACCSTSCPSYWWNSDKYLGPAVLLQAYRWIVDSRDQGTRERLQYLEDPFKLYRCHTILNCTKTCPK 220 The following BLAST results are available for this feature:
BLAST of CN185501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185501 ID=CN185501; Name=CN185501; organism=Citrus sinensis; type=EST; length=768bpback to top |