CN185501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: FRDB_ECOLI (Fumarate reductase iron-sulfur subunit OS=Escherichia coli (strain K12) GN=frdB PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.212e-18 Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 1 Query: 28 IKSEIDPSLTFRRSRCEGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNVYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPR 555 IK + P L++R S ICGSC M ++ LAC T + + L + + +DLVVDMT+ ++I+P++ + G I Q+ AK CI C C +CP + E ++GPAA+ A + DSRD KER+ ++ + ++ C + C+ CP+ Sbjct: 44 IKDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSRTADQGTNI-QTPAQMAKYHQFSGCINCGLCYAACPQFGLNPE-FIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPK 217
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: FRDB_ECOL6 (Fumarate reductase iron-sulfur subunit OS=Escherichia coli O6 GN=frdB PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.212e-18 Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 1 Query: 28 IKSEIDPSLTFRRSRCEGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNVYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPR 555 IK + P L++R S ICGSC M ++ LAC T + + L + + +DLVVDMT+ ++I+P++ + G I Q+ AK CI C C +CP + E ++GPAA+ A + DSRD KER+ ++ + ++ C + C+ CP+ Sbjct: 44 IKDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSRTADQGTNI-QTPAQMAKYHQFSGCINCGLCYAACPQFGLNPE-FIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPK 217
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: FRDB_ECO57 (Fumarate reductase iron-sulfur subunit OS=Escherichia coli O157:H7 GN=frdB PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.212e-18 Identity = 54/176 (30.68%), Postives = 87/176 (49.43%), Query Frame = 1 Query: 28 IKSEIDPSLTFRRSRCEGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNVYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPR 555 IK + P L++R S ICGSC M ++ LAC T + + L + + +DLVVDMT+ ++I+P++ + G I Q+ AK CI C C +CP + E ++GPAA+ A + DSRD KER+ ++ + ++ C + C+ CP+ Sbjct: 44 IKDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSRTADQGTNI-QTPAQMAKYHQFSGCINCGLCYAACPQFGLNPE-FIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPK 217
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: FRDB_WOLSU (Fumarate reductase iron-sulfur subunit OS=Wolinella succinogenes GN=frdB PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.613e-16 Identity = 65/190 (34.21%), Postives = 93/190 (48.95%), Query Frame = 1 Query: 28 IKSEIDPSLTFRRSRCEGICGSCAMNIDGCNGLAC--LTKISPSGSASTITPLPHMFVIKDLVVDMTNVYN-QYKSIEPWL---KRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTKE-RLEAIDDEFKLYRCHTILNCARACPRA*TLESR 576 I+ DP L F GICGSC M I+G LAC LTK G T+ PLP +IKDL VD N +N + +E W+ K + + + P+ ++ +LD CI C CC +C + E ++G A L ++ D DE T E E I D+ ++ C T+L C CP+ L+S+ Sbjct: 43 IRETYDPDLNFDFVCRAGICGSCGMMINGRPSLACRTLTKDFEDG-VITLLPLPAFKLIKDLSVDTGNWFNGMSQRVESWIHAQKEHDISKLEERIEPEVAQEVFELD---RCIECGCCIAACGTK-IMREDFVGAAGLNRVVRFMIDPHDERTDEDYYELIGDDDGVFGCMTLLACHDVCPKNLPLQSK 227
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: FRDB_HELPJ (Fumarate reductase iron-sulfur subunit OS=Helicobacter pylori J99 GN=frdB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.100e-15 Identity = 58/188 (30.85%), Postives = 92/188 (48.94%), Query Frame = 1 Query: 28 IKSEIDPSLTFRRSRCEGICGSCAMNIDGCNGLACLTKISP-SGSASTITPLPHMFVIKDLVVDMTNVYNQY-KSIEPWLKRKNPPPM--PGKEI-PQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTKERL-EAIDDEFKLYRCHTILNCARACPRA*TLES 573 I+ DP L+F GICGSCAM ++G LAC T S T+ P+P +IKDL V+ + ++ K +E W K + P K + P ++ +LD CI C CC SC + ++G A + A ++ DS DE + + E + D+ ++ C +++ C CP+ L+S Sbjct: 46 IREHQDPDLSFDFVCRAGICGSCAMMVNGRPRLACKTLTSSFENGVITLMPMPSFTLIKDLSVNTGDWFSDMTKRVESWAHSKEEVDITKPEKRVEPDEAQEVFELD---RCIECGCCIASCGTKLMRPN-FIGAAGMNRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQS 229
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: FRDB_HELPY (Fumarate reductase iron-sulfur subunit OS=Helicobacter pylori GN=frdB PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 8.699e-15 Identity = 58/188 (30.85%), Postives = 91/188 (48.40%), Query Frame = 1 Query: 28 IKSEIDPSLTFRRSRCEGICGSCAMNIDGCNGLACLTKISP-SGSASTITPLPHMFVIKDLVVDMTNVY-NQYKSIEPWLKRKNPPPM--PGKEI-PQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTKERL-EAIDDEFKLYRCHTILNCARACPRA*TLES 573 I+ DP L+F GICGSCAM ++G LAC T S T+ P+P +IKDL V+ + + + K +E W K + P K + P ++ +LD CI C CC SC + ++G A + A ++ DS DE + E + D+ ++ C +++ C CP+ L+S Sbjct: 46 IREHQDPDLSFDFVCRAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFLDMTKRVESWAHSKEEVDITRPEKRVEPDEAQEVFELD---RCIECGCCIASCGTKLMRPN-FIGAAGMNRAMRFMIDSHDERNDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQS 229
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: Y1067_METMP (Uncharacterized iron-sulfur protein MMP1067 OS=Methanococcus maripaludis GN=MMP1067 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.136e-14 Identity = 57/175 (32.57%), Postives = 86/175 (49.14%), Query Frame = 1 Query: 49 SLTFRRSRCEGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNVYNQYKSIEPWLKRKNPPPMPGKEI------PQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPR 555 ++ FR S G CGSCA+ I+ + LAC TK+ + I PL VI DLVVD Y + ++ ++++KN + KE+ P KD K+ G CI C C CP+ +++ Y GP + + D +DE +E+ EA D+ +Y C T C CP+ Sbjct: 39 NIQFRSSCKAGQCGSCAVMINKKSKLACKTKVEDN---MIIEPLEGFDVISDLVVDREPYYKKIGTLRNYIQKKN-EKISEKELDGLKLYPDDLKDVKKIRG---CIDCLSCIAMCPARKYSN--YPGPTLMRQLARFAFDPKDEIDREK-EAFDE--NIYNCTTCGRCVEVCPK 201
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: Y092_METJA (Uncharacterized iron-sulfur protein MJ0092 OS=Methanocaldococcus jannaschii GN=MJ0092 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.484e-14 Identity = 56/176 (31.82%), Postives = 80/176 (45.45%), Query Frame = 1 Query: 28 IKSEIDPSLTFRRSRCEGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNVYNQYKSIEPWLKRKNPPPMPGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTKERLEAIDDEFKLYRCHTILNCARACPR 555 I + ++ FR S CGSCA+ I+G LAC TK+ I PL VI+DL+VD Y + I+ +L RKN P IP+ ++ +L G CI C C + CP+ Y GP + + D RDE +E ++ +Y C T C CP+ Sbjct: 34 INKHYEANILFRASCRNAQCGSCAVTINGEPRLACETKVE---DGMIIEPLRGFKVIRDLIVDREPYYKKLLGIKNYLIRKNYPEELEILIPKYVEENKELRG---CIDCLSCLSVCPAR--EVSDYPGPTFMRQLARFAFDKRDEDGREITAYFEN---IYNCTTCAKCVEVCPK 198
BLAST of CN185501 vs. ExPASy Swiss-Prot
Match: DHSB_BACSU (Succinate dehydrogenase iron-sulfur subunit OS=Bacillus subtilis GN=sdhB PE=3 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 3.655e-13 Identity = 47/178 (26.40%), Postives = 87/178 (48.88%), Query Frame = 1 Query: 28 IKSEIDPSLTFRRSRCEGICGSCAMNIDGCNGLACLTKISPSGSASTITPLPHMFVIKDLVVDMTNVYNQYKSIEPWLKRKNPPPM-PGKEIPQSKKDRAKLDGMYECILCACCSTSCPSYWWTSEAYLGPAALLHAGGWISDSRDEYTK-ERLEAIDDEFKLYRCHTILNCARACPR 555 +K E +T+ + E +CG+C+M I+G +C I + P+ V++DL VD + +++ K ++ W+ + PG +P+ ++ A + +C+ C C +CP+ S+ ++GPA + + + K ERLEA+ DE L C NC ++CP+ Sbjct: 50 VKGEKTTPVTWDMNCLEEVCGACSMVINGKPRQSCTALIDQLEQPIRLKPMKTFPVVRDLQVDRSRMFDSLKKVKAWIPIDGTYDLGPGPRMPEKRRQWAY--ELSKCMTCGVCLEACPNVNSKSK-FMGPAPMSQVRLFNAHPTGAMNKSERLEALMDEGGLADCGNSQNCVQSCPK 224 The following BLAST results are available for this feature:
BLAST of CN185501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185501 ID=CN185501; Name=CN185501; organism=Citrus sinensis; type=EST; length=768bpback to top |