CN185493

Overview
NameCN185493
Unique NameCN185493
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length777
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3619 contig Csv1_Contig3619:133..909. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD_SYNY3 (6-phosphogluconate dehydrogenase, decarboxylating OS=Synechocystis sp. (strain PCC 6803) GN=gnd PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.198e-50
Identity = 109/196 (55.61%), Postives = 132/196 (67.35%), Query Frame = -3
Query:  191 PTIESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERVDMSGS--FHTEW 772
            PTI ++++AR +S LKEERV A+   + SG     +    D +  I  VR ALY SK+CSYAQGM LI   S E G+D+ L E+ RIWKGGCIIRA FLD+IKKA+  NP L N+L+ PEF + I++RQ  WR V+ LA   GI+    SSSL YFD+YRR  LP NL QAQRDYFGAHTYER D      FHTEW
Sbjct:  290 PTIYAAVNARVMSSLKEERVAASG--QLSGPSKTFSG---DVEAWIPKVRDALYCSKMCSYAQGMALIAKASQEFGYDVNLPEIARIWKGGCIIRAGFLDKIKKAFKDNPQLPNLLLAPEFKQSILDRQGPWREVLMLANEMGIAVPAFSSSLDYFDSYRRAVLPQNLTQAQRDYFGAHTYERTDKPRGEFFHTEW 480          
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD_BACLI (6-phosphogluconate dehydrogenase, decarboxylating OS=Bacillus licheniformis GN=gntZ PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.274e-47
Identity = 98/193 (50.78%), Postives = 130/193 (67.36%), Query Frame = -3
Query:  188 IESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERVDMSGSFHTEWF 766
            I  SL AR+LS LK+ER  A  V      G    E+ +D+   ID VRQALY  K+C+YAQG    +  S   GW L L ++  I++GGCIIRA FL+ I + YD+ PDL+N+LV P+FA+++ E QS  R+VVC  I+SGIS   +S++L+Y+D YR  R  ANL+QAQ +YFGAHTYER DM G FHT+W+
Sbjct:  279 ITESLFARYLSSLKDERTAAENVLA----GPETEERPLDQNVWIDRVRQALYMGKVCAYAQGFAQYKMTSDLNGWHLPLKDIALIFRGGCIIRAQFLNLISEVYDKQPDLSNLLVAPDFAEKLKEYQSGLRKVVCEGISSGISFPCLSTALSYYDGYRTGRSNANLLQAQANYFGAHTYERTDMEGVFHTDWY 467          
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD_ECOLI (6-phosphogluconate dehydrogenase, decarboxylating OS=Escherichia coli (strain K12) GN=gnd PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 3.284e-46
Identity = 95/192 (49.48%), Postives = 128/192 (66.67%), Query Frame = -3
Query:  191 IESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERVDMSGSFHTEW 766
            I  S+ AR++S LK++RV A+KV     +    A+   DK + I+ VR+ALY  KI SYAQG + +RA S E  WDL  GE+ +I++ GCIIRA FL +I  AY  NP +AN+L+ P F +   + Q A R VV  A+ +GI     S+++AY+D+YR   LPANL+QAQRDYFGAHTY+R+D  G FHTEW
Sbjct:  280 ITESVFARYISSLKDQRVAASKV-----LSGPQAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRIDKEGVFHTEW 466          
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD_RAT (6-phosphogluconate dehydrogenase, decarboxylating OS=Rattus norvegicus GN=Pgd PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.289e-46
Identity = 91/193 (47.15%), Postives = 130/193 (67.36%), Query Frame = -3
Query:  191 IESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERVDMSGSF-HTEW 766
            I  ++ AR LS LKEERV+A++  +    G  + +    K+  ++DVR+ALYASKI SYAQG  L+R  + E GW L  G +  +W+GGCIIR++FL +IK A++RNP+L N+L+D  F   + + Q +WRRV+   + +GI     +++L+++D YR E LPANL+QAQRDYFGAHTYE +   G F HT W
Sbjct:  281 IGEAVFARCLSSLKEERVQASRKLK----GPKMVQLEGSKQAFLEDVRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFERNPELQNLLLDDFFKSAVDDCQDSWRRVISTGVQAGIPMPCFTTALSFYDGYRHEMLPANLIQAQRDYFGAHTYELLSKPGEFIHTNW 469          
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD_SALTY (6-phosphogluconate dehydrogenase, decarboxylating OS=Salmonella typhimurium GN=gnd PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 5.602e-46
Identity = 97/194 (50.00%), Postives = 127/194 (65.46%), Query Frame = -3
Query:  185 IESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERVDMSGSFHTEWFK 766
            I  S+ AR++S LK +RV A+KV     +    A+   DK + I+ VR+ALY  KI SYAQG + +RA S E  WDL  GE+ +I++ GCIIRA FL +I  AY  N D+AN+L+ P F K   E Q A R VV  A+ +GI     S+++AY+D+YR   LPANL+QAQRDYFGAHTY+R D  G FHTEW +
Sbjct:  280 ITESVFARYISSLKAQRVAASKV-----LSGPKAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASDEYHWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENADIANLLLAPYFKKIADEYQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRTDKEGIFHTEWLE 468          
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD_MOUSE (6-phosphogluconate dehydrogenase, decarboxylating OS=Mus musculus GN=Pgd PE=2 SV=3)

HSP 1 Score: 184.496 bits (467), Expect = 5.602e-46
Identity = 91/193 (47.15%), Postives = 129/193 (66.84%), Query Frame = -3
Query:  191 IESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERVDMSGSF-HTEW 766
            I  ++ AR LS LKEERV+A++  +    G  + +    KK  ++D+R+ALYASKI SYAQG  L+R  + E GW L  G +  +W+GGCIIR++FL +IK A++RNP+L N+L+D  F   +   Q +WRRV+   + +GI     +++L+++D YR E LPANL+QAQRDYFGAHTYE +   G F HT W
Sbjct:  281 IGEAVFARCLSSLKEERVQASQKLK----GPKVVQLEGSKKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFERNPELQNLLLDDFFKSAVDNCQDSWRRVISTGVQAGIPMPCFTTALSFYDGYRHEMLPANLIQAQRDYFGAHTYELLTKPGEFIHTNW 469          
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD_SHIFL (6-phosphogluconate dehydrogenase, decarboxylating OS=Shigella flexneri GN=gnd PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.317e-46
Identity = 94/192 (48.96%), Postives = 127/192 (66.15%), Query Frame = -3
Query:  191 IESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERVDMSGSFHTEW 766
            I  S+ AR++S LK++RV A+KV     +    A+   DK + I+ VR ALY  KI SYAQG + +RA S E  WDL  GE+ +I++ GCIIRA FL +I  AY  NP +AN+L+ P F +   + Q A R VV  A+ +GI     ++++AY+D+YR   LPANL+QAQRDYFGAHTY+R+D  G FHTEW
Sbjct:  280 ITESVFARYISSLKDQRVAASKV-----LSGPQAQSAGDKAEFIEKVRSALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFAAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRIDKEGVFHTEW 466          
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD_LACLA (6-phosphogluconate dehydrogenase, decarboxylating OS=Lactococcus lactis subsp. lactis GN=gnd PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.129e-45
Identity = 93/195 (47.69%), Postives = 128/195 (65.64%), Query Frame = -3
Query:  188 PTIESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERVDMSGSFHTEWF 772
            P I  S+ AR++S  K+ERV+A+KV     +       + DKK++I+ +R+ALY SKI SYAQG   +R  S E  WDL  G + +IW+ GCIIRA FL  I  A+D++ +L N+L+D  F       Q A R VV LA+ +GI     +S+++Y+D+YR E LPANL+QAQRDYFGAHTYER D +G FH +W+
Sbjct:  280 PLITESVFARYISTYKDERVKASKVLSGPAVNF-----SGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPYGTIAQIWRAGCIIRAEFLQNITDAFDKDSELENLLLDDYFVDITKRYQEAVRDVVSLAVQAGIPIPTFTSAISYYDSYRSENLPANLIQAQRDYFGAHTYERTDKAGIFHYDWY 469          
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD_HUMAN (6-phosphogluconate dehydrogenase, decarboxylating OS=Homo sapiens GN=PGD PE=1 SV=3)

HSP 1 Score: 182.57 bits (462), Expect = 2.129e-45
Identity = 91/193 (47.15%), Postives = 128/193 (66.32%), Query Frame = -3
Query:  191 IESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERVDMSGSF-HTEW 766
            I  ++ AR LS LK+ER++A+K  +    G    +   DKK  ++D+R+ALYASKI SYAQG  L+R  + E GW L  G +  +W+GGCIIR++FL +IK A+DRNP+L N+L+D  F   +   Q +WRR V   + +GI     +++L+++D YR E LPA+L+QAQRDYFGAHTYE +   G F HT W
Sbjct:  281 IGEAVFARCLSSLKDERIQASKKLK----GPQKFQFDGDKKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNPELQNLLLDDFFKSAVENCQDSWRRAVSTGVQAGIPMPCFTTALSFYDGYRHEMLPASLIQAQRDYFGAHTYELLAKPGQFIHTNW 469          
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD_LACLM (6-phosphogluconate dehydrogenase, decarboxylating OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gnd PE=1 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 6.194e-45
Identity = 92/195 (47.18%), Postives = 128/195 (65.64%), Query Frame = -3
Query:  188 PTIESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERVDMSGSFHTEWF 772
            P I  S+ AR++S  K+ERV+A+KV     +     + + DKK++I+ +R+ALY SKI SYAQG   +R  S E  WDL  G + +IW+ GCIIRA FL  I  A+D++ +L N+L+D  F       Q A R VV LA+ +G      +S+++Y+D+YR E LPANL+QAQRDYFGAHTYER D +G FH +W+
Sbjct:  280 PLITESVFARYISTYKDERVKASKVLSGPAL-----DFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPYGTIAQIWRAGCIIRAEFLQNITDAFDKDSELENLLLDDYFVDITKRYQEAVRDVVSLAVQAGTPIPTFTSAISYYDSYRSENLPANLIQAQRDYFGAHTYERTDKAGIFHYDWY 469          
The following BLAST results are available for this feature:
BLAST of CN185493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
6PGD_SYNY32.198e-5055.616-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_BACLI2.274e-4750.786-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_ECOLI3.284e-4649.486-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_RAT4.289e-4647.156-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SALTY5.602e-4650.006-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_MOUSE5.602e-4647.156-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHIFL7.317e-4648.966-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_LACLA2.129e-4547.696-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_HUMAN2.129e-4547.156-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_LACLM6.194e-4547.186-phosphogluconate dehydrogenase, decarboxylating ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G21_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185493 ID=CN185493; Name=CN185493; organism=Citrus sinensis; type=EST; length=777bp
AGGATAGAGGGTTATTCGAAAATCAAATGAAAATAAAACTTAAGATTTCC
CTTTTGTCCACGATAATAAAAAGAAAATAATTATAGTTTCCGTCAATGAA
CATTATTGGGTTCAATAATAGTGGTTCATTGAGGCAAGATACAACAACAG
ACGGTTCAAATCAGATCTTTGACTGTTTAGCAATCTTGAACCATTCAGTA
TGGAAGGATCCAGACATGTCAACCCTCTCATAGGTATGAGCTCCAAAGTA
ATCTCTTTGAGCCTGAACCAAATTAGCAGGCAGCCTCTCTCTCCTGTATG
TGTCAAAATAAGCAAGGCTGGAGGACATACCATGAGTACTAATGCCTGAA
TTGATAGCAAGGCAGACAACTCTACGCCAAGCAGATTGTCGTTCTATAAT
CTCCTTTGCAAACTCTGGATCGACAAGAACATTGGCCAGATCTGGGTTTC
TGTCATAGGCCTTCTTAATACGGTCCAAGAATATAGCACGAATAATGCAA
CCCCCCTTCCAAATCCTAGTCAGCTCCCCAAGTTTCAAGTCCCACCCCTT
CTCAATGCTCTTTGCACGTATCAAGTTCATTCCCTGGGCATAGCTGCATA
TTTTGGATGCATAGAGTGCTTGTCTCACGTCATCAATCAACTTTTTCTTA
TCAACAGTTTGCTCAGCTAGGACATCGCCAATGCCACTTGATCTGAAGAC
TTTGGCAGCTTCAACTCTTTCCTCCTTCAAACCACTTAGGAACCTGGCAT
CCAAGGATGATTCTATTGTGGGGGCAG
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