CN185493

Overview
NameCN185493
Unique NameCN185493
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length777
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3619 contig Csv1_Contig3619:133..909. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD1_YEAST (6-phosphogluconate dehydrogenase, decarboxylating 1 OS=Saccharomyces cerevisiae GN=GND1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.908e-42
Identity = 87/179 (48.60%), Postives = 118/179 (65.92%), Query Frame = -3
Query:  230 IESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTY 766
            I  ++ AR LS LK ER+ A+KV       +V  +   D+++ +DD+ QALYASKI SYAQG  LIR  +   GW L    +  +W+GGCIIR++FL +I KAY   PDL N+L +  FA  + + QS WR+ + LA   GI T   S++L+++D YR ERLPANL+QAQRDYFGAHT+
Sbjct:  279 IGEAVFARCLSALKNERIRASKVLPGP---EVPKDAVKDREQFVDDLEQALYASKIISYAQGFMLIREAAATYGWKLNNPAIALMWRGGCIIRSVFLGQITKAYREEPDLENLLFNKFFADAVTKAQSGWRKSIALATTYGIPTPAFSTALSFYDGYRSERLPANLLQAQRDYFGAHTF 454          
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD_CAEEL (6-phosphogluconate dehydrogenase, decarboxylating OS=Caenorhabditis elegans GN=T25B9.9 PE=2 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.181e-41
Identity = 90/193 (46.63%), Postives = 121/193 (62.69%), Query Frame = -3
Query:  191 IESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERVDMSGSF-HTEW 766
            I  ++ AR LS LK+ERV A+K      +      Q  DK+  I  + +ALYASKI SYAQG  L+   S +  W+L  G +  +W+GGCIIR+ FL  I+ A+ +N  L+N+L+D  F K I E Q +WR VVC A+  GI     SS+LA++D Y  E +PANL+QAQRDYFGAHTYE +   G++ HT W
Sbjct:  280 IGEAVFARCLSALKDERVRASKQLPRPQVSPDTVVQ--DKRVFIKQISKALYASKIVSYAQGFMLLAEASKQFNWNLNFGAIALMWRGGCIIRSRFLGDIEHAFQKNKQLSNLLLDDFFTKAITEAQDSWRVVVCAAVRLGIPVPAFSSALAFYDGYTSEVVPANLLQAQRDYFGAHTYELLAKPGTWVHTNW 470          
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD_SHISO (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Shigella sonnei GN=gnd PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.087e-41
Identity = 87/182 (47.80%), Postives = 121/182 (66.48%), Query Frame = -3
Query:  221 IESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERV 766
            I  S+ AR++S LK++RV A+KV     +    A+   DK + I+ VR+ALY  KI SYAQG + +RA S E  WDL  GE+ +I++ GCIIRA FL +I  AY  NP +AN+L+ P F +   + Q A R VV  A+ +GI     ++++AY+D+YR   LPANL+QAQRDYFGAHTY+R+
Sbjct:  269 ITESVFARYISSLKDQRVAASKV-----LSGPQAQSAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFAAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRI 445          
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD_SHIDY (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Shigella dysenteriae GN=gnd PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.256e-41
Identity = 87/182 (47.80%), Postives = 121/182 (66.48%), Query Frame = -3
Query:  221 IESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERV 766
            I  S+ AR++S LK++RV A+KV     +    A+   DK + I+ VR+ALY  KI SYAQG + +RA S E  WDL  GE+ +I++ GCIIRA FL +I  AY  NP +AN+L+ P F +   + Q A R VV  A+ +GI     ++++AY+D+YR   LPANL+QAQRDYFGAHTY+R+
Sbjct:  269 ITESVFARYISSLKDQRVAASKV-----LSGPQAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFAAAVAYYDSYRAAFLPANLIQAQRDYFGAHTYKRI 445          
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD2_YEAST (6-phosphogluconate dehydrogenase, decarboxylating 2 OS=Saccharomyces cerevisiae GN=GND2 PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.256e-41
Identity = 88/190 (46.32%), Postives = 121/190 (63.68%), Query Frame = -3
Query:  200 IESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTV-DKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERVDMSGSFH 766
            I  ++ AR LS +K+ER  A+K+      G  + +  + D+++ + D+ QALYASKI SYAQG  LIR  +   GW L    +  +W+GGCIIR++FL  I KAY  +PDL N+L +  FA  + + QS WRR + LA   GI T   S++LA++D YR ERLPANL+QAQRDYFGAHT+  +    S H
Sbjct:  282 IGEAVFARCLSAIKDERKRASKLLA----GPTVPKDAIHDREQFVYDLEQALYASKIISYAQGFMLIREAARSYGWKLNNPAIALMWRGGCIIRSVFLAEITKAYRDDPDLENLLFNEFFASAVTKAQSGWRRTIALAATYGIPTPAFSTALAFYDGYRSERLPANLLQAQRDYFGAHTFRILPECASAH 467          
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD_KLETE (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Klebsiella terrigena GN=gnd PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.209e-40
Identity = 88/181 (48.62%), Postives = 119/181 (65.75%), Query Frame = -3
Query:  224 IESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYER 766
            I  S+ AR++S LK++RV A+KV          A+   DK + I+ VR+ALY  KI SYAQG + +RA S E  WDL  GE+ +I++ GCIIRA FL +I  AY+ N  +AN+L+ P F +   E Q A R VV  A+ +GI     S+++AY+D+YR   LPANL+QAQRDYFGAHTY+R
Sbjct:  269 ITESVFARYISSLKDQRVAASKVLTGPQ-----AQPASDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASNEYSWDLNYGEIAKIFRAGCIIRAQFLQKITDAYEENAGIANLLLAPYFKQIADEYQQALRDVVAYAVQNGIPVPTFSAAIAYYDSYRSAVLPANLIQAQRDYFGAHTYKR 444          
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD_KLEPL (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Klebsiella planticola GN=gnd PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.579e-40
Identity = 87/181 (48.07%), Postives = 120/181 (66.30%), Query Frame = -3
Query:  224 IESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYER 766
            I  S+ AR++S LK++RV A+KV          A+   DK + ++ VR+ALY  KI SYAQG + +RA S E  WDL  GE+ +I++ GCIIRA FL +I  AY++N  +AN+L+ P F +   E Q A R VV  A+ +GI     S+++AY+D+YR   LPANL+QAQRDYFGAHTY+R
Sbjct:  269 ITESVFARYISSLKDQRVAASKVLTGPK-----AQPAGDKAEFVEKVRRALYLGKIVSYAQGFSQLRAASNEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYEQNAGIANLLLAPYFKQIADEYQQALRDVVAYAVQNGIPVPTFSAAIAYYDSYRSAVLPANLIQAQRDYFGAHTYKR 444          
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD_CITDI (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Citrobacter diversus GN=gnd PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.062e-40
Identity = 89/181 (49.17%), Postives = 119/181 (65.75%), Query Frame = -3
Query:  224 IESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYER 766
            I  S+ AR++S LKE+RV A+KV     +    A+   DK + I+ VR+ALY  KI SYAQG + +RA S E  WDL  GE+ +I++ GCIIRA FL +I  AY  N  +AN+L+ P F K   + Q A R VV  A+ +GI     S+++AY+D+YR   LPANL+QAQRDYFGAHTY+R
Sbjct:  269 ITESVFARYISSLKEQRVAASKV-----LSGPKAQLAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASDEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENAGIANLLLAPYFKKIADDYQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKR 444          
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD_SHIBO (6-phosphogluconate dehydrogenase, decarboxylating (Fragment) OS=Shigella boydii GN=gnd PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.517e-40
Identity = 86/182 (47.25%), Postives = 121/182 (66.48%), Query Frame = -3
Query:  221 IESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERV 766
            I  S+ AR++S LK++RV A+KV     +    A+   +K + I+ VR+ALY  KI SYAQG + +RA S E  WDL  GE+ +I++ GCIIRA FL +I  AY  NP +AN+L+ P F +   + Q A R VV  A+ +GI     ++++AY+D+YR   LPANL+QAQRDYFGAHTY+R+
Sbjct:  269 ITESVFARYISSLKDQRVAASKV-----LSGPQAQPAGNKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFAAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRI 445          
BLAST of CN185493 vs. ExPASy Swiss-Prot
Match: 6PGD_CUNEL (6-phosphogluconate dehydrogenase, decarboxylating OS=Cunninghamella elegans GN=6-PGD PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.517e-40
Identity = 88/193 (45.60%), Postives = 122/193 (63.21%), Query Frame = -3
Query:  191 IESSLDARFLSGLKEERVEAAKVFRSSGIGDVLAEQTVDKKKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELTRIWKGGCIIRAIFLDRIKKAYDRNPDLANVLVDPEFAKEIIERQSAWRRVVCLAINSGISTHGMSSSLAYFDTYRRERLPANLVQAQRDYFGAHTYERVDMSGSF-HTEW 766
            I  ++ +R LS LK+ERV A+K+ +    G   ++ T DKK  I  + QALYA+KI SYAQG  L+R  + +  W L    +  +W+GGCIIR++FL +I+ AY +NP+L N+L D  F     + Q AWR V   A+  GI T  +S++L ++D  R E LPANL+QAQRDYFGAHTYE +   G + HT W
Sbjct:  283 IGEAVYSRCLSSLKDERVRASKILQ----GPSSSKFTGDKKTFIAQLGQALYAAKIVSYAQGYMLMRQAAKDYEWKLNNAGIALMWRGGCIIRSVFLGKIRDAYTKNPELENLLFDDFFKDATAKAQDAWRNVTAQAVLMGIPTPALSTALNFYDGLRHEILPANLLQAQRDYFGAHTYELLHTPGKWVHTNW 471          
The following BLAST results are available for this feature:
BLAST of CN185493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
6PGD1_YEAST4.908e-4248.606-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CAEEL3.181e-4146.636-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHISO7.087e-4147.806-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHIDY9.256e-4147.806-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD2_YEAST9.256e-4146.326-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_KLETE1.209e-4048.626-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_KLEPL1.579e-4048.076-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CITDI2.062e-4049.176-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SHIBO3.517e-4047.256-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CUNEL3.517e-4045.606-phosphogluconate dehydrogenase, decarboxylating ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G21_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185493 ID=CN185493; Name=CN185493; organism=Citrus sinensis; type=EST; length=777bp
AGGATAGAGGGTTATTCGAAAATCAAATGAAAATAAAACTTAAGATTTCC
CTTTTGTCCACGATAATAAAAAGAAAATAATTATAGTTTCCGTCAATGAA
CATTATTGGGTTCAATAATAGTGGTTCATTGAGGCAAGATACAACAACAG
ACGGTTCAAATCAGATCTTTGACTGTTTAGCAATCTTGAACCATTCAGTA
TGGAAGGATCCAGACATGTCAACCCTCTCATAGGTATGAGCTCCAAAGTA
ATCTCTTTGAGCCTGAACCAAATTAGCAGGCAGCCTCTCTCTCCTGTATG
TGTCAAAATAAGCAAGGCTGGAGGACATACCATGAGTACTAATGCCTGAA
TTGATAGCAAGGCAGACAACTCTACGCCAAGCAGATTGTCGTTCTATAAT
CTCCTTTGCAAACTCTGGATCGACAAGAACATTGGCCAGATCTGGGTTTC
TGTCATAGGCCTTCTTAATACGGTCCAAGAATATAGCACGAATAATGCAA
CCCCCCTTCCAAATCCTAGTCAGCTCCCCAAGTTTCAAGTCCCACCCCTT
CTCAATGCTCTTTGCACGTATCAAGTTCATTCCCTGGGCATAGCTGCATA
TTTTGGATGCATAGAGTGCTTGTCTCACGTCATCAATCAACTTTTTCTTA
TCAACAGTTTGCTCAGCTAGGACATCGCCAATGCCACTTGATCTGAAGAC
TTTGGCAGCTTCAACTCTTTCCTCCTTCAAACCACTTAGGAACCTGGCAT
CCAAGGATGATTCTATTGTGGGGGCAG
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