DC887897
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH601_PROM3 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9303) GN=groL1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.724e-20 Identity = 51/101 (50.50%), Postives = 72/101 (71.29%), Query Frame = -1 Query: 239 EEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 541 EE +GA+IV+ +L PL IA+NAG NG+VV+E V S GYNAATG+Y D++AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG Sbjct: 435 EELIGANIVEASLAAPLMRIAENAGANGAVVAENVKSRPISD-GYNAATGDYIDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKEAAPAG 534
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH601_ACAM1 (60 kDa chaperonin 1 OS=Acaryochloris marina (strain MBIC 11017) GN=groL1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.724e-20 Identity = 57/109 (52.29%), Postives = 72/109 (66.06%), Query Frame = -1 Query: 218 DEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 544 DEEKVGAD+V AL PL IA NAG G+VV EKV +D YGYNA T YED++AAG++DP KVVR L++A S+A L ++ +VV+ +PEPA A M G Sbjct: 433 DEEKVGADLVGIALEAPLTQIADNAGKEGAVVVEKVRDAD-FSYGYNAMTDTYEDMIAAGVVDPAKVVRSGLQNAGSIAGMVLTTEALVVD--KPEPAGAAAPDMGGMG 538
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: RUBA_PEA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 2.252e-20 Identity = 51/108 (47.22%), Postives = 76/108 (70.37%), Query Frame = -1 Query: 242 IKETLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 565 IKE L++ +E++GADIV++AL P LIA+NAG+ G VV EK+ + + + GYNA T YE+L+ +G+IDP KV R L++A+SVA L + +VVE +P+ A+ A Sbjct: 474 IKEKLEDADERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIKNGE-WEVGYNAMTDTYENLVESGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAAVAA 580
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH60_PELLD (60 kDa chaperonin OS=Pelodictyon luteolum (strain DSM 273) GN=groL PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.252e-20 Identity = 52/114 (45.61%), Postives = 74/114 (64.91%), Query Frame = -1 Query: 212 DNDEEKVGADIVKRALCYPLKLIAKNAGV-NGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 550 DN+++K G DI++RAL PL+ I N G +G+VV E+V + +G+NA T YEDL+AAG++DPTKV R LE+A+SVA L ++ + +IKE + MPA P G G Sbjct: 432 DNEDQKTGIDIIRRALEEPLRQIVANTGTTDGAVVLERVKQGEGD-FGFNARTEQYEDLVAAGVVDPTKVTRSALENAASVASILLTTEACITDIKEDKSDMPAMPPGGMGGMG 544
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH60_DESVV (60 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groL PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.252e-20 Identity = 49/110 (44.55%), Postives = 70/110 (63.64%), Query Frame = -1 Query: 218 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 547 +D+E G +I++RA+ PL+ IA NAG GS+V E+V + +G+NAATG YEDL+ G+IDP KV R L++A+SVA L ++C + E EP+ MP M G Sbjct: 433 DDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERVREGKDG-FGFNAATGEYEDLIGVGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMPMPGGMGGMG 541
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH60_DESVH (60 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groL PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.252e-20 Identity = 49/110 (44.55%), Postives = 70/110 (63.64%), Query Frame = -1 Query: 218 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 547 +D+E G +I++RA+ PL+ IA NAG GS+V E+V + +G+NAATG YEDL+ G+IDP KV R L++A+SVA L ++C + E EP+ MP M G Sbjct: 433 DDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERVREGKDG-FGFNAATGEYEDLIGVGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMPMPGGMGGMG 541
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH60_AQUAE (60 kDa chaperonin OS=Aquifex aeolicus GN=groL PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.252e-20 Identity = 50/99 (50.51%), Postives = 71/99 (71.72%), Query Frame = -1 Query: 263 DNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHK---YGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKE 550 DN ++++G DI+K+A+ PLK IA NAG +GSVV EKV+ K +G+NAATG Y D+ AGIIDPTKVVR +E+A+SVA T L ++ ++ ++ E Sbjct: 432 DNHDQQLGIDIIKKAVRTPLKQIAYNAGYDGSVVLEKVIELGKEKGVSWGFNAATGEYVDMYEAGIIDPTKVVRTAIENAASVAGTMLTAEALIADLPE 530
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH601_GLOVI (60 kDa chaperonin 1 OS=Gloeobacter violaceus GN=groL1 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.252e-20 Identity = 51/101 (50.50%), Postives = 74/101 (73.27%), Query Frame = -1 Query: 239 EEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 541 EEK+GA I+++AL PL+ IA+NAG+ GSV++EKV + + +G+NA T YEDL+AAGIIDP KV R L++A+S+A L ++C+VV+ K + PAG Sbjct: 434 EEKIGARIIQKALEGPLRQIAENAGLEGSVIAEKVRNLE-FNFGFNAMTNEYEDLVAAGIIDPVKVTRSALQNAASIAAMVLTTECIVVD-KPEDDKTPAG 532
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH60_DESDG (60 kDa chaperonin OS=Desulfovibrio desulfuricans (strain G20) GN=groL PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.941e-20 Identity = 52/111 (46.85%), Postives = 72/111 (64.86%), Query Frame = -1 Query: 218 NDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVE-IKEPEPAMPAGNPMDNSG 547 +D+E G I++RA+ PL+ IA NAG GS++ EKV + +G+NAATG +EDL+AAG+IDP KV R L++A+SVA L ++C + E KE PA PA M G Sbjct: 433 DDDEAAGVTIIRRAIEEPLRQIAANAGFEGSIICEKVKEGKD-AFGFNAATGEFEDLIAAGVIDPKKVSRIALQNAASVASLLLTTECAIAEKPKEDAPAAPAMGGMGGMG 542
BLAST of DC887897 vs. ExPASy Swiss-Prot
Match: CH60_CLOPH (60 kDa chaperonin OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=groL PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.941e-20 Identity = 50/103 (48.54%), Postives = 68/103 (66.02%), Query Frame = -1 Query: 233 EEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRXCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 541 +E+ GA I+ +AL PL IA+NAG+ G+V+ KV G+NA T Y D++ GI+DP+KV R L++A+SVA TFL ++ V IKEP PAMPAG P Sbjct: 434 DERTGAQIILKALEAPLSCIAQNAGLEGAVIVNKVREKKTG-VGFNALTEKYVDMVEDGILDPSKVTRSALQNATSVASTFLTTEAAVASIKEPAPAMPAGGP 535 The following BLAST results are available for this feature:
BLAST of DC887897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887897 ID=DC887897; Name=DC887897; organism=Citrus sinensis; type=EST; length=565bpback to top |