CN185479

Overview
NameCN185479
Unique NameCN185479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN185479_ssr300 microsatellite CN185479_ssr300:300..314. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig760 contig Csv1_Contig760:78..651. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: SCJ1_YEAST (DnaJ-related protein SCJ1 OS=Saccharomyces cerevisiae GN=SCJ1 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.499e-21
Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKGGDPE----KFKELAQAYEVLSDPQKREIYDQYGEDALKEXXXXXXXA-------HDPFDI 335
            YY IL + K+A++ ++K AYR+ + + HPDK    E    KF E+ +AY+VLSDP+K++IYDQ+G DA+K                HDPFDI
Sbjct:   24 YYAILEIDKDATEKEIKSAYRQLSKKYHPDKNAGSEEAHQKFIEVGEAYDVLSDPEKKKIYDQFGADAVKNGGGGGGPGGPGAGGFHDPFDI 115          

HSP 2 Score: 42.3578 bits (98), Expect = 3.499e-21
Identity = 17/47 (36.17%), Postives = 26/47 (55.32%), Query Frame = 1
Query:  433 SVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGASMKCSGCQGSGMTV 573
            S++  Y G+S + +L+ N  C  C G GS  G   +C  CQG G+ +
Sbjct:  149 SLKQFYSGSSIEFTLNLNDECDACHGSGSADGKLAQCPDCQGRGVII 195          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_PHOLL (Chaperone protein dnaJ OS=Photorhabdus luminescens subsp. laumondii GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.553e-21
Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKG-GDPE---KFKELAQAYEVLSDPQKREIYDQYGEDALKE 293
            YYE+LGVSK AS+ ++KKAY+  A++ HPD+  GD E   +FKE+ +AYE+L+D QKR  YDQYG  A ++
Sbjct:    6 YYEVLGVSKTASEKEIKKAYKRLAMKYHPDRNQGDKEAESQFKEVKEAYEILTDDQKRAAYDQYGHAAFEQ 76          

HSP 2 Score: 41.5874 bits (96), Expect = 4.553e-21
Identity = 18/53 (33.96%), Postives = 33/53 (62.26%), Query Frame = 1
Query:  409 DVLHPLEGSVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGAS-MKCSGCQGSG 564
            D+ + +E ++E+  +G +K++ +     C  C G G+K+G S + CS CQG+G
Sbjct:  112 DLRYSMELTLEEAVRGVTKEIRIPTLETCDICHGSGAKAGTSPVTCSTCQGAG 164          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_YERE8 (Chaperone protein dnaJ OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.303e-20
Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKGGDP----EKFKELAQAYEVLSDPQKREIYDQYGEDALKE 293
            YYE+LGV K+A + ++KKAY+  A++ HPD+  D     E FKE+ +AYE+L+DPQKR  YDQYG  A ++
Sbjct:    6 YYEVLGVKKDADEREIKKAYKRLAVKYHPDRNQDENDTGENFKEVKEAYEILTDPQKRAAYDQYGHAAFEQ 76          

HSP 2 Score: 38.5058 bits (88), Expect = 1.303e-20
Identity = 16/53 (30.19%), Postives = 33/53 (62.26%), Query Frame = 1
Query:  409 DVLHPLEGSVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGAS-MKCSGCQGSG 564
            D+ + ++ ++E+  +G +K++ +     C  C G G+K G+S + CS C+G+G
Sbjct:  116 DLRYNMDLTLEEAVRGVTKEIRIPTLNECDVCHGSGAKPGSSPVTCSTCRGAG 168          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATT (Chaperone protein dnaJ OS=Francisella tularensis subsp. tularensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.209e-20
Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKG-GDPE---KFKELAQAYEVLSDPQKREIYDQYGEDALKE 293
            YYEIL VSK AS  ++K+AYR+ A++ HPD+  GD E   KFKE+++AYE+LSD  KR  YDQ+G   + +
Sbjct:    6 YYEILNVSKTASGVEIKRAYRKLAMEYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQ 76          

HSP 2 Score: 42.3578 bits (98), Expect = 8.209e-20
Identity = 18/52 (34.62%), Postives = 29/52 (55.77%), Query Frame = 1
Query:  409 DVLHPLEGSVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGASMKCSGCQGSG 564
            D+ + LE ++E+ + G  K++++ R   C  C G GSKS +   C  C G G
Sbjct:  115 DLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKTTCHACHGQG 166          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_FRAT1 (Chaperone protein dnaJ OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.209e-20
Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKG-GDPE---KFKELAQAYEVLSDPQKREIYDQYGEDALKE 293
            YYEIL VSK AS  ++K+AYR+ A++ HPD+  GD E   KFKE+++AYE+LSD  KR  YDQ+G   + +
Sbjct:    6 YYEILNVSKTASGVEIKRAYRKLAMEYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQ 76          

HSP 2 Score: 42.3578 bits (98), Expect = 8.209e-20
Identity = 18/52 (34.62%), Postives = 29/52 (55.77%), Query Frame = 1
Query:  409 DVLHPLEGSVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGASMKCSGCQGSG 564
            D+ + LE ++E+ + G  K++++ R   C  C G GSKS +   C  C G G
Sbjct:  115 DLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKTTCHACHGQG 166          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATW (Chaperone protein dnaJ OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.210e-20
Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKG-GDPE---KFKELAQAYEVLSDPQKREIYDQYGEDALKE 293
            YYEIL VSK AS  ++K+AYR+ A++ HPD+  GD E   KFKE+++AYE+LSD  KR  YDQ+G   + +
Sbjct:    6 YYEILNVSKTASGVEIKRAYRKLAMEYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQ 76          

HSP 2 Score: 42.3578 bits (98), Expect = 8.210e-20
Identity = 18/52 (34.62%), Postives = 29/52 (55.77%), Query Frame = 1
Query:  409 DVLHPLEGSVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGASMKCSGCQGSG 564
            D+ + LE ++E+ + G  K++++ R   C  C G GSKS +   C  C G G
Sbjct:  112 DLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKTTCHACHGQG 163          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_AGGAC (Chaperone protein dnaJ OS=Aggregatibacter actinomycetemcomitans GN=dnaJ PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.068e-19
Identity = 36/71 (50.70%), Postives = 54/71 (76.06%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKG-GDPEK---FKELAQAYEVLSDPQKREIYDQYGEDALKE 293
            YYE+LG+S++A + ++K+AY++ A+Q HPD+  GD EK   FKE+ +AYEVL+D +KR  YDQYG  A ++
Sbjct:    6 YYELLGISRSADEKEIKRAYKKLAMQYHPDRTKGDKEKEEKFKEIQEAYEVLNDKEKRAAYDQYGHAAFEQ 76          

HSP 2 Score: 38.891 bits (89), Expect = 1.068e-19
Identity = 16/53 (30.19%), Postives = 32/53 (60.38%), Query Frame = 1
Query:  409 DVLHPLEGSVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGASMK-CSGCQGSG 564
            D+ + +E ++E+  KGT+K + +     C  C G G+++G+ ++ C  C G+G
Sbjct:  117 DLRYDIEITLEEAVKGTTKDIKIHTLAPCDTCHGTGAEAGSKVETCPHCHGAG 169          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_BLOPB (Chaperone protein dnaJ OS=Blochmannia pennsylvanicus (strain BPEN) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.389e-19
Identity = 38/76 (50.00%), Postives = 52/76 (68.42%), Query Frame = 3
Query:   75 KSDNPKYYEILGVSKNASQDDLKKAYREAAIQNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYGEDALK 290
            KSD   YYEILG+SKNA + ++KK+Y+  A++ HPD+         KFKE+ +AYEVLS+ +KR  YDQYG  A +
Sbjct:    3 KSD---YYEILGISKNADEREIKKSYKRLAMKFHPDRNPGNTTAETKFKEIKEAYEVLSNSEKRAAYDQYGHAAFE 75          

HSP 2 Score: 41.5874 bits (96), Expect = 1.389e-19
Identity = 19/53 (35.85%), Postives = 31/53 (58.49%), Query Frame = 1
Query:  409 DVLHPLEGSVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGAS-MKCSGCQGSG 564
            D+ + +E S+ED  +G  K++ +     C KCRG G++S A+ + C  C G G
Sbjct:  115 DLRYNIELSLEDAVRGIIKEICIPTLSTCEKCRGTGARSNAAIITCMTCHGQG 167          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_HAMD5 (Chaperone protein dnaJ OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.389e-19
Identity = 37/70 (52.86%), Postives = 51/70 (72.86%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKGGDPE---KFKELAQAYEVLSDPQKREIYDQYGEDALKE 293
            YYEILG++KNA++ D+K AY+  A + HPD+  D +   KFKE+ +AYEVLSD QKR  YDQ+G  A ++
Sbjct:    6 YYEILGIAKNANEQDIKDAYKRLAKKYHPDRNKDKDAETKFKEMKEAYEVLSDQQKRAAYDQHGHTAFEQ 75          

HSP 2 Score: 36.1946 bits (82), Expect = 1.389e-19
Identity = 16/53 (30.19%), Postives = 31/53 (58.49%), Query Frame = 1
Query:  409 DVLHPLEGSVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGA-SMKCSGCQGSG 564
            D+ + L  ++E+  +G SK++ ++    C  C+G G+K G   + C+ C+G G
Sbjct:  112 DLRYTLNLTLEEAVRGASKEIHITTLVHCEHCKGSGAKQGTRPVTCTTCRGVG 164          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_FRATU (Chaperone protein dnaJ OS=Francisella tularensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.389e-19
Identity = 36/71 (50.70%), Postives = 51/71 (71.83%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKG-GDPE---KFKELAQAYEVLSDPQKREIYDQYGEDALKE 293
            YYEIL +SK AS  ++K+AYR+ A++ HPD+  GD E   KFKE+++AYE+LSD  KR  YDQ+G   + +
Sbjct:    6 YYEILNISKTASGVEIKRAYRKLAMKYHPDRNPGDKEAEIKFKEISEAYEILSDDSKRSRYDQFGHAGVNQ 76          

HSP 2 Score: 42.3578 bits (98), Expect = 1.389e-19
Identity = 18/52 (34.62%), Postives = 29/52 (55.77%), Query Frame = 1
Query:  409 DVLHPLEGSVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGASMKCSGCQGSG 564
            D+ + LE ++E+ + G  K++++ R   C  C G GSKS +   C  C G G
Sbjct:  112 DLEYTLEITLEEAFFGVEKEITIPRMESCDSCDGTGSKSRSKTTCHACHGQG 163          
The following BLAST results are available for this feature:
BLAST of CN185479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SCJ1_YEAST3.499e-2143.48DnaJ-related protein SCJ1 OS=Saccharomyces cerevis... [more]
DNAJ_PHOLL4.553e-2153.52Chaperone protein dnaJ OS=Photorhabdus luminescens... [more]
DNAJ_YERE81.303e-2050.70Chaperone protein dnaJ OS=Yersinia enterocolitica ... [more]
DNAJ_FRATT8.209e-2052.11Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_FRAT18.209e-2052.11Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_FRATW8.210e-2052.11Chaperone protein dnaJ OS=Francisella tularensis s... [more]
DNAJ_AGGAC1.068e-1950.70Chaperone protein dnaJ OS=Aggregatibacter actinomy... [more]
DNAJ_BLOPB1.389e-1950.00Chaperone protein dnaJ OS=Blochmannia pennsylvanic... [more]
DNAJ_HAMD51.389e-1952.86Chaperone protein dnaJ OS=Hamiltonella defensa sub... [more]
DNAJ_FRATU1.389e-1950.70Chaperone protein dnaJ OS=Francisella tularensis G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185479 ID=CN185479; Name=CN185479; organism=Citrus sinensis; type=EST; length=577bp
AGTGCCGTCTCGCGTCTACTCTGAAGATCTGAAATTTTTCTAGATACAAG
AAGATGTTCGGAAGAGCGCCCAAGAAAAGCGATAACCCAAAGTACTATGA
GATTCTCGGAGTCTCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTT
ATAGGGAAGCCGCCATCCAAAACCATCCTGACAAGGGCGGTGATCCTGAG
AAGTTTAAAGAGTTGGCGCAAGCGTATGAGGTTCTGAGTGACCCCCAGAA
GCGTGAGATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGG
GTGGTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTC
CGTGGCAGCCCATTTGGGGGTGGGAGCAGCAGAGGAGAGAAGGCGAAGGA
GGGGAGAGGACGTACTCCATCCCCTCGAGGGTTCGGTGGAGGATCTGTAC
AAGGGGACATCTAAGAAGCTCTCGCTCTCCCGCAATGGAGTCTGCACCAA
GTGCAGAGGGAAGGGGTCTAAGTCAGGGGCATCGATGAAATGTTCTGGGT
GCCAGGGATCTGGAATGACAGTTTCAA
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