CN185479

Overview
NameCN185479
Unique NameCN185479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_PSE14 (Chaperone protein dnaJ OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.222e-13
Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYG 275
            YYE+LGV + +S+ DLKKAYR  A+++HPD+  D     E FKE  +AYEVLSD  KR  YDQYG
Sbjct:    6 YYEVLGVERGSSEADLKKAYRRLAMKHHPDRNPDDKASEELFKEANEAYEVLSDASKRAAYDQYG 70          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_PROA2 (Chaperone protein dnaJ OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.222e-13
Identity = 36/65 (55.38%), Postives = 49/65 (75.38%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYG 275
            YYE+LGV ++A++D++KKAYR+ A++ HPDK  D     EKFKE  +AYEVLS+  KR  YDQ+G
Sbjct:    5 YYEVLGVGRSATKDEIKKAYRKLAMKYHPDKNPDNSEAEEKFKEANEAYEVLSNDDKRRRYDQFG 69          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_NITSB (Chaperone protein dnaJ OS=Nitratiruptor sp. (strain SB155-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.222e-13
Identity = 36/70 (51.43%), Postives = 52/70 (74.29%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYGEDALK 290
            YYE+L V +NAS +++KKAYR+ A++ HPD+  D     EKFK + +AY+VLSD +KR +YDQYG+  L+
Sbjct:    6 YYELLEVDRNASFEEIKKAYRKLALKYHPDRNPDNPEAEEKFKLINEAYQVLSDEEKRALYDQYGKAGLE 75          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_METCA (Chaperone protein dnaJ OS=Methylococcus capsulatus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.222e-13
Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYG 275
            YYE LGV +NAS  D+KKA+R  A++ HPD+  D     E+FK + +AY+VLSDP+KR  YDQ+G
Sbjct:    6 YYETLGVPRNASDSDIKKAFRRLAMKYHPDRNKDNPEAEERFKSVKEAYDVLSDPKKRSAYDQFG 70          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOK5 (Chaperone protein dnaJ OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.222e-13
Identity = 35/65 (53.85%), Postives = 49/65 (75.38%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYG 275
            YYEILG+ K AS  D+KKA+R+ A++ HPD+  +     EKFKE+ +AY+VL+DPQK+  YDQ+G
Sbjct:    6 YYEILGLDKGASDQDIKKAFRKLALKYHPDRNPNDKKAEEKFKEINEAYQVLTDPQKKAQYDQFG 70          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_BUCCC (Chaperone protein dnaJ OS=Buchnera aphidicola subsp. Cinara cedri GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.222e-13
Identity = 37/83 (44.58%), Postives = 51/83 (61.45%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYGEDALKEXXXXXXXAHDPF 329
            YY  L +S  ASQ D+K+AY++ AI+ HPD+        EKFK++ QAYE+LSD +KR +YDQYG  A ++        H  F
Sbjct:    6 YYTTLNISNTASQLDIKRAYKKLAIKYHPDRNQGNKTAEEKFKKIKQAYEILSDTKKRNLYDQYGHSAFEQNNNSNNEFHSSF 88          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_BRECH (Chaperone protein dnaJ OS=Brevibacillus choshinensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.222e-13
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPD--KGGD-PEKFKELAQAYEVLSDPQKREIYDQYG 275
            YYE+LGV K A  D++KKAYR+ A Q HPD  K  D  EKFKE+ +AY+VLS+PQKR  YD++G
Sbjct:    5 YYEVLGVGKGADADEIKKAYRKLARQYHPDVNKAADAEEKFKEVKEAYDVLSEPQKRAQYDRFG 68          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_ONYPE (Chaperone protein dnaJ OS=Onion yellows phytoplasma GN=dnaJ PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.527e-13
Identity = 34/83 (40.96%), Postives = 47/83 (56.63%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPD---KGGDPEKFKELAQAYEVLSDPQKREIYDQYGEDALKEXXXXXXXAHDPFD 332
            YY ILG+ K+AS +D+KKAYR  A + HPD   +     KFKE+ +AY VL D  K+  YD++G+ +            D FD
Sbjct:    6 YYHILGLDKDASPEDIKKAYRSLAKKYHPDISKEANAENKFKEVQEAYSVLGDASKKSNYDRFGDASDNGFSGFGGGGFDGFD 88          

HSP 2 Score: 29.6462 bits (65), Expect = 1.527e-13
Identity = 14/49 (28.57%), Postives = 23/49 (46.94%), Query Frame = 1
Query:  433 SVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGAS-MKCSGCQGSGMTVS 576
            S  D   G +K + ++    C  C GKG+ S    + C  C G+G  ++
Sbjct:  121 SFMDAVLGANKTIEITVEADCRVCHGKGAVSNQDVITCKRCGGNGQIIT 169          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNJC7_MOUSE (DnaJ homolog subfamily C member 7 OS=Mus musculus GN=Dnajc7 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.596e-13
Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 3
Query:   72 KKSDNPKYYEILGVSKNASQDDLKKAYREAAIQNHPDKGG---------DPEKFKELAQAYEVLSDPQKREIYDQYGEDALKE 293
            KKS    YY+ILGV KNAS+D++KKAYR+ A+ +HPD+           + +KFKE+ +A+ +LSDP+K+  YD  G+D  +E
Sbjct:  375 KKSKRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQKEEEKKFKEVGEAFTILSDPKKKTRYDS-GQDLDEE 456          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNJC7_HUMAN (DnaJ homolog subfamily C member 7 OS=Homo sapiens GN=DNAJC7 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 1.596e-13
Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 3
Query:   72 KKSDNPKYYEILGVSKNASQDDLKKAYREAAIQNHPDKGG---------DPEKFKELAQAYEVLSDPQKREIYDQYGEDALKE 293
            KKS    YY+ILGV KNAS+D++KKAYR+ A+ +HPD+           + +KFKE+ +A+ +LSDP+K+  YD  G+D  +E
Sbjct:  375 KKSKRKDYYKILGVDKNASEDEIKKAYRKRALMHHPDRHSGASAEVQKEEEKKFKEVGEAFTILSDPKKKTRYDS-GQDLDEE 456          
The following BLAST results are available for this feature:
BLAST of CN185479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_PSE141.222e-1356.92Chaperone protein dnaJ OS=Pseudomonas syringae pv.... [more]
DNAJ_PROA21.222e-1355.38Chaperone protein dnaJ OS=Prosthecochloris aestuar... [more]
DNAJ_NITSB1.222e-1351.43Chaperone protein dnaJ OS=Nitratiruptor sp. (strai... [more]
DNAJ_METCA1.222e-1353.85Chaperone protein dnaJ OS=Methylococcus capsulatus... [more]
DNAJ_CLOK51.222e-1353.85Chaperone protein dnaJ OS=Clostridium kluyveri (st... [more]
DNAJ_BUCCC1.222e-1344.58Chaperone protein dnaJ OS=Buchnera aphidicola subs... [more]
DNAJ_BRECH1.222e-1359.38Chaperone protein dnaJ OS=Brevibacillus choshinens... [more]
DNAJ_ONYPE1.527e-1340.96Chaperone protein dnaJ OS=Onion yellows phytoplasm... [more]
DNJC7_MOUSE1.596e-1345.78DnaJ homolog subfamily C member 7 OS=Mus musculus ... [more]
DNJC7_HUMAN1.596e-1345.78DnaJ homolog subfamily C member 7 OS=Homo sapiens ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0001G11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185479 ID=CN185479; Name=CN185479; organism=Citrus sinensis; type=EST; length=577bp
AGTGCCGTCTCGCGTCTACTCTGAAGATCTGAAATTTTTCTAGATACAAG
AAGATGTTCGGAAGAGCGCCCAAGAAAAGCGATAACCCAAAGTACTATGA
GATTCTCGGAGTCTCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTT
ATAGGGAAGCCGCCATCCAAAACCATCCTGACAAGGGCGGTGATCCTGAG
AAGTTTAAAGAGTTGGCGCAAGCGTATGAGGTTCTGAGTGACCCCCAGAA
GCGTGAGATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGG
GTGGTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTC
CGTGGCAGCCCATTTGGGGGTGGGAGCAGCAGAGGAGAGAAGGCGAAGGA
GGGGAGAGGACGTACTCCATCCCCTCGAGGGTTCGGTGGAGGATCTGTAC
AAGGGGACATCTAAGAAGCTCTCGCTCTCCCGCAATGGAGTCTGCACCAA
GTGCAGAGGGAAGGGGTCTAAGTCAGGGGCATCGATGAAATGTTCTGGGT
GCCAGGGATCTGGAATGACAGTTTCAA
back to top