CN185479

Overview
NameCN185479
Unique NameCN185479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_SODGM (Chaperone protein dnaJ OS=Sodalis glossinidius (strain morsitans) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.735e-19
Identity = 41/77 (53.25%), Postives = 56/77 (72.73%), Query Frame = 3
Query:   75 KSDNPKYYEILGVSKNASQDDLKKAYREAAIQNHPDKG-GDPE---KFKELAQAYEVLSDPQKREIYDQYGEDALKE 293
            KSD   YYEILGVS++A + ++KKAY+  A++ HPD+  G+ E   KFKE+ +AYEVL+D QKR  YDQYG  A ++
Sbjct:    3 KSD---YYEILGVSRDAEEREIKKAYKRQAMKFHPDRNRGNAEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQ 76          

HSP 2 Score: 35.8094 bits (81), Expect = 8.735e-19
Identity = 16/53 (30.19%), Postives = 29/53 (54.72%), Query Frame = 1
Query:  409 DVLHPLEGSVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGAS-MKCSGCQGSG 564
            D+ + +E S+E+  +G ++++ +     C  C G G+K G S + C  C G G
Sbjct:  114 DLRYNMELSLEEAVRGVTREIRIPTLEECDVCHGSGAKPGTSAVTCPTCHGQG 166          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNJB5_MOUSE (DnaJ homolog subfamily B member 5 OS=Mus musculus GN=Dnajb5 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 9.663e-19
Identity = 41/69 (59.42%), Postives = 57/69 (82.61%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKGGDP---EKFKELAQAYEVLSDPQKREIYDQYGEDALK 290
            YY+ILG+   A++D++KKAYR+ A++ HPDK  +P   EKFKE+A+AY+VLSDP+KR +YDQYGE+ LK
Sbjct:    5 YYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRSLYDQYGEEGLK 73          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNJB5_HUMAN (DnaJ homolog subfamily B member 5 OS=Homo sapiens GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.648e-18
Identity = 41/69 (59.42%), Postives = 57/69 (82.61%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKGGDP---EKFKELAQAYEVLSDPQKREIYDQYGEDALK 290
            YY+ILG+   A++D++KKAYR+ A++ HPDK  +P   EKFKE+A+AY+VLSDP+KR +YDQYGE+ LK
Sbjct:    5 YYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLK 73          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNJB5_BOVIN (DnaJ homolog subfamily B member 5 OS=Bos taurus GN=DNAJB5 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.648e-18
Identity = 41/69 (59.42%), Postives = 57/69 (82.61%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKGGDP---EKFKELAQAYEVLSDPQKREIYDQYGEDALK 290
            YY+ILG+   A++D++KKAYR+ A++ HPDK  +P   EKFKE+A+AY+VLSDP+KR +YDQYGE+ LK
Sbjct:    5 YYKILGIPSGANEDEIKKAYRKMALKYHPDKNKEPNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLK 73          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_XYLFT (Chaperone protein dnaJ OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.498e-18
Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKG-GD---PEKFKELAQAYEVLSDPQKREIYDQYGEDALK 290
            YY++LGV + AS+DDLKKAYR  A++ HPD+  GD      FKE  +AYEVL+D +KR++YD +G  A +
Sbjct:    6 YYQVLGVPRTASEDDLKKAYRRCAMKYHPDRNPGDAAAEAAFKECKEAYEVLADTKKRKLYDTHGHAAFE 75          

HSP 2 Score: 38.1206 bits (87), Expect = 2.498e-18
Identity = 17/52 (32.69%), Postives = 27/52 (51.92%), Query Frame = 1
Query:  409 DVLHPLEGSVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGASMKCSGCQGSG 564
            DV + +E  +E+   G  +++ +     CT C G GS+ G    C  C+GSG
Sbjct:  109 DVGYMVELDLEEAVAGVERQIQIPTLVECTHCHGSGSEDGHVETCGTCRGSG 160          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_XYLFM (Chaperone protein dnaJ OS=Xylella fastidiosa (strain M12) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.498e-18
Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKG-GD---PEKFKELAQAYEVLSDPQKREIYDQYGEDALK 290
            YY++LGV + AS+DDLKKAYR  A++ HPD+  GD      FKE  +AYEVL+D +KR++YD +G  A +
Sbjct:    6 YYQVLGVPRTASEDDLKKAYRRCAMKYHPDRNPGDAAAEAAFKECKEAYEVLADTKKRKLYDTHGHAAFE 75          

HSP 2 Score: 38.1206 bits (87), Expect = 2.498e-18
Identity = 17/52 (32.69%), Postives = 27/52 (51.92%), Query Frame = 1
Query:  409 DVLHPLEGSVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGASMKCSGCQGSG 564
            DV + +E  +E+   G  +++ +     CT C G GS+ G    C  C+GSG
Sbjct:  109 DVGYMVELDLEEAVAGVERQIQIPTLVECTHCNGSGSEDGHVETCGTCRGSG 160          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_XYLFA (Chaperone protein dnaJ OS=Xylella fastidiosa GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.498e-18
Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKG-GD---PEKFKELAQAYEVLSDPQKREIYDQYGEDALK 290
            YY++LGV + AS+DDLKKAYR  A++ HPD+  GD      FKE  +AYEVL+D +KR++YD +G  A +
Sbjct:    6 YYQVLGVPRTASEDDLKKAYRRCAMKYHPDRNPGDAAAEAAFKECKEAYEVLADTKKRKLYDTHGHAAFE 75          

HSP 2 Score: 38.1206 bits (87), Expect = 2.498e-18
Identity = 17/52 (32.69%), Postives = 27/52 (51.92%), Query Frame = 1
Query:  409 DVLHPLEGSVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGASMKCSGCQGSG 564
            DV + +E  +E+   G  +++ +     CT C G GS+ G    C  C+GSG
Sbjct:  109 DVGYMVELDLEEAVAGVERQIQIPTLVECTHCHGSGSEDGHVETCGTCRGSG 160          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_XYLF2 (Chaperone protein dnaJ OS=Xylella fastidiosa (strain M23) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.498e-18
Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKG-GD---PEKFKELAQAYEVLSDPQKREIYDQYGEDALK 290
            YY++LGV + AS+DDLKKAYR  A++ HPD+  GD      FKE  +AYEVL+D +KR++YD +G  A +
Sbjct:    6 YYQVLGVPRTASEDDLKKAYRRCAMKYHPDRNPGDAAAEAAFKECKEAYEVLADTKKRKLYDTHGHAAFE 75          

HSP 2 Score: 38.1206 bits (87), Expect = 2.498e-18
Identity = 17/52 (32.69%), Postives = 27/52 (51.92%), Query Frame = 1
Query:  409 DVLHPLEGSVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGASMKCSGCQGSG 564
            DV + +E  +E+   G  +++ +     CT C G GS+ G    C  C+GSG
Sbjct:  109 DVGYMVELDLEEAVAGVERQIQIPTLVECTHCHGSGSEDGHVETCGTCRGSG 160          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: SIS1_YEAST (Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.796e-18
Identity = 41/68 (60.29%), Postives = 58/68 (85.29%), Query Frame = 3
Query:   90 KYYEILGVSKNASQDDLKKAYREAAIQNHPDKG-GDPEKFKELAQAYEVLSDPQKREIYDQYGEDALK 290
            K Y++LGVS +A++ +LKK YR+AA++ HPDK  GD EKFKE+++A+E+L+DPQKREIYDQYG +A +
Sbjct:    6 KLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAAR 73          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 4.796e-18
Identity = 40/69 (57.97%), Postives = 57/69 (82.61%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKGGDP---EKFKELAQAYEVLSDPQKREIYDQYGEDALK 290
            YY+ LG+++ AS D++K+AYR  A++ HPDK  +P   EKFKE+A+AY+VLSDP+KREI+D+YGE+ LK
Sbjct:    5 YYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK 73          
The following BLAST results are available for this feature:
BLAST of CN185479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_SODGM8.735e-1953.25Chaperone protein dnaJ OS=Sodalis glossinidius (st... [more]
DNJB5_MOUSE9.663e-1959.42DnaJ homolog subfamily B member 5 OS=Mus musculus ... [more]
DNJB5_HUMAN1.648e-1859.42DnaJ homolog subfamily B member 5 OS=Homo sapiens ... [more]
DNJB5_BOVIN1.648e-1859.42DnaJ homolog subfamily B member 5 OS=Bos taurus GN... [more]
DNAJ_XYLFT2.498e-1851.43Chaperone protein dnaJ OS=Xylella fastidiosa (stra... [more]
DNAJ_XYLFM2.498e-1851.43Chaperone protein dnaJ OS=Xylella fastidiosa (stra... [more]
DNAJ_XYLFA2.498e-1851.43Chaperone protein dnaJ OS=Xylella fastidiosa GN=dn... [more]
DNAJ_XYLF22.498e-1851.43Chaperone protein dnaJ OS=Xylella fastidiosa (stra... [more]
SIS1_YEAST4.796e-1860.29Protein SIS1 OS=Saccharomyces cerevisiae GN=SIS1 P... [more]
DNJB1_MOUSE4.796e-1857.97DnaJ homolog subfamily B member 1 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185479 ID=CN185479; Name=CN185479; organism=Citrus sinensis; type=EST; length=577bp
AGTGCCGTCTCGCGTCTACTCTGAAGATCTGAAATTTTTCTAGATACAAG
AAGATGTTCGGAAGAGCGCCCAAGAAAAGCGATAACCCAAAGTACTATGA
GATTCTCGGAGTCTCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTT
ATAGGGAAGCCGCCATCCAAAACCATCCTGACAAGGGCGGTGATCCTGAG
AAGTTTAAAGAGTTGGCGCAAGCGTATGAGGTTCTGAGTGACCCCCAGAA
GCGTGAGATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGG
GTGGTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTC
CGTGGCAGCCCATTTGGGGGTGGGAGCAGCAGAGGAGAGAAGGCGAAGGA
GGGGAGAGGACGTACTCCATCCCCTCGAGGGTTCGGTGGAGGATCTGTAC
AAGGGGACATCTAAGAAGCTCTCGCTCTCCCGCAATGGAGTCTGCACCAA
GTGCAGAGGGAAGGGGTCTAAGTCAGGGGCATCGATGAAATGTTCTGGGT
GCCAGGGATCTGGAATGACAGTTTCAA
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