CN185479

Overview
NameCN185479
Unique NameCN185479
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ1_DROME (DnaJ protein homolog 1 OS=Drosophila melanogaster GN=DnaJ-1 PE=1 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 3.108e-17
Identity = 40/69 (57.97%), Postives = 55/69 (79.71%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKGGDP---EKFKELAQAYEVLSDPQKREIYDQYGEDALK 290
            +Y+ILG+ + AS D++KKAYR+ A++ HPDK   P   E+FKE+A+AYEVLSD +KR+I+D YGED LK
Sbjct:    5 FYKILGLERKASDDEIKKAYRKLALKYHPDKNKSPQAEERFKEIAEAYEVLSDKKKRDIFDNYGEDGLK 73          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_STRMK (Chaperone protein dnaJ OS=Stenotrophomonas maltophilia (strain K279a) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.481e-17
Identity = 36/70 (51.43%), Postives = 48/70 (68.57%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKG-GD---PEKFKELAQAYEVLSDPQKREIYDQYGEDALK 290
            YYE+LGV++ A+ D+LKKAYR  A++ HPD+  GD      FKE  +AYEVLSD  KR +YD +G  A +
Sbjct:    6 YYEVLGVARTATDDELKKAYRRCAMKFHPDRNPGDAAAEASFKECKEAYEVLSDGNKRRMYDSHGHAAFE 75          

HSP 2 Score: 35.4242 bits (80), Expect = 4.481e-17
Identity = 14/52 (26.92%), Postives = 26/52 (50.00%), Query Frame = 1
Query:  409 DVLHPLEGSVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGASMKCSGCQGSG 564
            D+ + +E  +E+  +G  +++ +     C  C G GS+ G    C+ C G G
Sbjct:  115 DIGYVMELDLEEAVRGVERRIEIPTLAECGDCDGSGSEDGKVETCNVCHGRG 166          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCPE (Chaperone protein dnaJ OS=Mycoplasma penetrans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.302e-17
Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 3
Query:   78 SDNPKYYEILGVSKNASQDDLKKAYREAAIQNHPDKGGDP---EKFKELAQAYEVLSDPQKREIYDQYGEDALKEXXXXXXXAHDPFDI 335
            S    YYE+LGVSK+A+ D +K A+R+ A+Q HPD+  +P   EKFKE+ QAYEVLSDP KR  YD++G + + +         DPFDI
Sbjct:    2 SSKRDYYEVLGVSKDATDDQIKSAFRKKAMQYHPDRNKEPDAEEKFKEVNQAYEVLSDPDKRANYDRFGHEGV-DGQFGGGAGFDPFDI 89          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLAB (Chaperone protein dnaJ OS=Chlamydophila abortus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 5.302e-17
Identity = 41/67 (61.19%), Postives = 56/67 (83.58%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKG-GDPE---KFKELAQAYEVLSDPQKREIYDQYGED 281
            YY++LGVSK AS +++KK+YR+ A++ HPDK  GD E   +FKE+++AYEVLSDPQKRE YD+YG+D
Sbjct:    3 YYDVLGVSKTASPEEIKKSYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDPQKRESYDRYGKD 69          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_XANC5 (Chaperone protein dnaJ OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.826e-17
Identity = 36/70 (51.43%), Postives = 48/70 (68.57%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKG-GD---PEKFKELAQAYEVLSDPQKREIYDQYGEDALK 290
            YYE+LGV++ AS ++LKKAYR  A+++HPD+  GD      FKE  +AYEVLSD  KR  YD +G  A +
Sbjct:    6 YYEVLGVARGASDEELKKAYRRCAMKHHPDRNPGDAAAEAAFKECKEAYEVLSDGNKRRAYDAHGHAAFE 75          

HSP 2 Score: 35.4242 bits (80), Expect = 5.826e-17
Identity = 16/52 (30.77%), Postives = 24/52 (46.15%), Query Frame = 1
Query:  409 DVLHPLEGSVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGASMKCSGCQGSG 564
            DV + LE  +E+   G  +++ +     C  C G GS+ G    C  C G G
Sbjct:  116 DVGYVLELDLEEAVAGIERRIEIPTLVECAPCHGSGSEDGKVETCGTCHGRG 167          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 6.925e-17
Identity = 41/86 (47.67%), Postives = 58/86 (67.44%), Query Frame = 3
Query:   90 KYYEILGVSKNASQDDLKKAYREAAIQNHPDKGGDP------EKFKELAQAYEVLSDPQKREIYDQYGEDALKEXXXXXXXAHDPF 329
            +YYE LGV  + ++D+LKKAYR+ A++ HPDK   P       KFK++++AYEVLSDP+KR++YD YG + +KE       A D F
Sbjct:    6 EYYERLGVKPDCTEDELKKAYRKMAVKYHPDKNQGPGKDAAEAKFKDISEAYEVLSDPEKRKMYDSYGSEGMKESGFHASSAEDLF 91          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_XANAC (Chaperone protein dnaJ OS=Xanthomonas axonopodis pv. citri GN=dnaJ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.573e-17
Identity = 36/70 (51.43%), Postives = 48/70 (68.57%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKG-GD---PEKFKELAQAYEVLSDPQKREIYDQYGEDALK 290
            YYE+LGV++ AS ++LKKAYR  A+++HPD+  GD      FKE  +AYEVLSD  KR  YD +G  A +
Sbjct:    6 YYEVLGVARGASDEELKKAYRRCAMKHHPDRNPGDAAAEAAFKECKEAYEVLSDGNKRRAYDAHGHAAFE 75          

HSP 2 Score: 35.039 bits (79), Expect = 7.573e-17
Identity = 16/52 (30.77%), Postives = 24/52 (46.15%), Query Frame = 1
Query:  409 DVLHPLEGSVEDLYKGTSKKLSLSRNGVCTKCRGKGSKSGASMKCSGCQGSG 564
            DV + LE  +E+   G  +++ +     C  C G GS+ G    C  C G G
Sbjct:  116 DVGYVLELDLEEAVAGIERRIEIPTLIECAPCHGSGSEDGKVETCGTCHGRG 167          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNAJ_RALME (Chaperone protein dnaJ OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 9.044e-17
Identity = 39/65 (60.00%), Postives = 52/65 (80.00%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKGGD----PEKFKELAQAYEVLSDPQKREIYDQYG 275
            YYE+LGV KNAS D++KKAYR+ A+++HPD+  D     EKFKE+ +AYE+LSDP+K+  YDQYG
Sbjct:    6 YYEVLGVGKNASDDEIKKAYRKLAMKHHPDRNPDNKEAEEKFKEVKEAYEMLSDPEKKAAYDQYG 70          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DJB10_MOUSE (DnaJ homolog subfamily B member 10 OS=Mus musculus GN=Dnajb10 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 9.044e-17
Identity = 43/70 (61.43%), Postives = 53/70 (75.71%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKGGD-----PEKFKELAQAYEVLSDPQKREIYDQYGEDAL 287
            YYEIL V ++AS DD+KKAYR+ A+Q HPDK  D      +KFKE+A+AYEVLSD  KREIYD+YG + L
Sbjct:    4 YYEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGL 73          
BLAST of CN185479 vs. ExPASy Swiss-Prot
Match: DNJB2_HUMAN (DnaJ homolog subfamily B member 2 OS=Homo sapiens GN=DNAJB2 PE=2 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 1.181e-16
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 3
Query:   93 YYEILGVSKNASQDDLKKAYREAAIQNHPDKGGD-----PEKFKELAQAYEVLSDPQKREIYDQYGEDAL 287
            YYEIL V ++AS DD+KKAYR  A+Q HPDK  D      +KFKE+A+AYEVLSD  KREIYD+YG + L
Sbjct:    4 YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGL 73          
The following BLAST results are available for this feature:
BLAST of CN185479 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ1_DROME3.108e-1757.97DnaJ protein homolog 1 OS=Drosophila melanogaster ... [more]
DNAJ_STRMK4.481e-1751.43Chaperone protein dnaJ OS=Stenotrophomonas maltoph... [more]
DNAJ_MYCPE5.302e-1749.44Chaperone protein dnaJ OS=Mycoplasma penetrans GN=... [more]
DNAJ_CHLAB5.302e-1761.19Chaperone protein dnaJ OS=Chlamydophila abortus GN... [more]
DNAJ_XANC55.826e-1751.43Chaperone protein dnaJ OS=Xanthomonas campestris p... [more]
DNJA1_DICDI6.925e-1747.67DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
DNAJ_XANAC7.573e-1751.43Chaperone protein dnaJ OS=Xanthomonas axonopodis p... [more]
DNAJ_RALME9.044e-1760.00Chaperone protein dnaJ OS=Ralstonia metallidurans ... [more]
DJB10_MOUSE9.044e-1761.43DnaJ homolog subfamily B member 10 OS=Mus musculus... [more]
DNJB2_HUMAN1.181e-1661.43DnaJ homolog subfamily B member 2 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185479 ID=CN185479; Name=CN185479; organism=Citrus sinensis; type=EST; length=577bp
AGTGCCGTCTCGCGTCTACTCTGAAGATCTGAAATTTTTCTAGATACAAG
AAGATGTTCGGAAGAGCGCCCAAGAAAAGCGATAACCCAAAGTACTATGA
GATTCTCGGAGTCTCGAAAAACGCTTCGCAAGATGATCTGAAGAAGGCTT
ATAGGGAAGCCGCCATCCAAAACCATCCTGACAAGGGCGGTGATCCTGAG
AAGTTTAAAGAGTTGGCGCAAGCGTATGAGGTTCTGAGTGACCCCCAGAA
GCGTGAGATATATGATCAATACGGCGAGGATGCGCTTAAAGAGGGAATGG
GTGGTGGTGGTGGTGCCCATGACCCATTCGACATATTCCAATCCTTCTTC
CGTGGCAGCCCATTTGGGGGTGGGAGCAGCAGAGGAGAGAAGGCGAAGGA
GGGGAGAGGACGTACTCCATCCCCTCGAGGGTTCGGTGGAGGATCTGTAC
AAGGGGACATCTAAGAAGCTCTCGCTCTCCCGCAATGGAGTCTGCACCAA
GTGCAGAGGGAAGGGGTCTAAGTCAGGGGCATCGATGAAATGTTCTGGGT
GCCAGGGATCTGGAATGACAGTTTCAA
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