CN185474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185474 vs. ExPASy Swiss-Prot
Match: RL17_DICDI (60S ribosomal protein L17 OS=Dictyostelium discoideum GN=rpl17 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.276e-33 Identity = 62/95 (65.26%), Postives = 73/95 (76.84%), Query Frame = -1 Query: 278 IPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 562 IPF RF GGVGRT QAK QGRWP KS + IL LL+NAE+NAE KGL+V+ L I+H+QV +AQ+QRRRTYRAHGRINPYM SP +E L+ Sbjct: 60 IPFRRFKGGVGRTGQAKI-FGTSQGRWPKKSVEHILSLLQNAEANAEAKGLNVEKLKIAHVQVQRAQQQRRRTYRAHGRINPYMCSPSTVEFILT 153 HSP 2 Score: 41.2022 bits (95), Expect = 1.276e-33 Identity = 18/31 (58.06%), Postives = 26/31 (83.87%), Query Frame = -3 Query: 567 FKNTRETAHAIRKLPLTKAKRYLEDVMAHKQ 659 FKNTRE+A AI+ + LT+AK YL +V+AH++ Sbjct: 28 FKNTRESAMAIKGMLLTRAKAYLNNVLAHRE 58
BLAST of CN185474 vs. ExPASy Swiss-Prot
Match: RL17_YARLI (60S ribosomal protein L17 OS=Yarrowia lipolytica GN=RPL17 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.672e-33 Identity = 70/118 (59.32%), Postives = 80/118 (67.80%), Query Frame = -1 Query: 215 RAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLSXXXXXXXXXXETQLATSKSKK 568 RAIPF + G +GRT Q K + RWPVKS KF+ DLL+NA++NAE KGLD + L ISHIQVNQA KQRRRTYRAHGRIN Y SSP HIEL LS ET LA S++ Sbjct: 56 RAIPFRKHAGSIGRTGQGKEFGVT-KARWPVKSIKFVQDLLQNAQANAETKGLDKETLVISHIQVNQAPKQRRRTYRAHGRINAYQSSPSHIELILSEPAEEIAKAKETSLAHISSRQ 172 HSP 2 Score: 31.9574 bits (71), Expect = 3.672e-33 Identity = 17/31 (54.84%), Postives = 19/31 (61.29%), Query Frame = -3 Query: 567 FKNTRETAHAIRKLPLTKAKRYLEDVMAHKQ 659 FKNT E A AIR L KA YL+ V HK+ Sbjct: 26 FKNTYEVAGAIRGWNLQKALAYLDQVTDHKR 56
BLAST of CN185474 vs. ExPASy Swiss-Prot
Match: RL17A_SCHPO (60S ribosomal protein L17-A OS=Schizosaccharomyces pombe GN=rpl17a PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.780e-33 Identity = 64/97 (65.98%), Postives = 74/97 (76.29%), Query Frame = -1 Query: 278 RAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 568 +A+PF RF GGVGRTAQ K Q RWPVKS KF DLLKNAE+NAE KGLD+D L I H+QVN A KQRRRTYRAHGR+ Y+SSP HIE+ ++ Sbjct: 56 QAVPFRRFNGGVGRTAQGKEFGVT-QARWPVKSVKFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVA 151 HSP 2 Score: 31.5722 bits (70), Expect = 4.780e-33 Identity = 15/31 (48.39%), Postives = 20/31 (64.52%), Query Frame = -3 Query: 567 FKNTRETAHAIRKLPLTKAKRYLEDVMAHKQ 659 FKN+RE A I + L KA +L++V HKQ Sbjct: 26 FKNSREVAFTINGMSLKKAFIFLDNVKEHKQ 56
BLAST of CN185474 vs. ExPASy Swiss-Prot
Match: RL17_DEBHA (60S ribosomal protein L17 OS=Debaryomyces hansenii GN=RPL17 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.056e-32 Identity = 63/97 (64.95%), Postives = 70/97 (72.16%), Query Frame = -1 Query: 278 RAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 568 RAIPF RF +GRT Q K + RWP KS FI DLL+N ++NAE KGLD L +SHIQVNQA KQRRRTYRAHGRIN Y SSPCHIEL L+ Sbjct: 56 RAIPFRRFNSSIGRTGQGKEFGVT-KARWPAKSVNFIKDLLRNGQANAESKGLDASKLKVSHIQVNQAPKQRRRTYRAHGRINAYQSSPCHIELILT 151 HSP 2 Score: 35.039 bits (79), Expect = 1.056e-32 Identity = 15/31 (48.39%), Postives = 23/31 (74.19%), Query Frame = -3 Query: 567 FKNTRETAHAIRKLPLTKAKRYLEDVMAHKQ 659 +KNTRETA AI L +A++YL+ V+ H++ Sbjct: 26 YKNTRETAQAISGWKLERAQKYLDQVLDHQR 56
BLAST of CN185474 vs. ExPASy Swiss-Prot
Match: RL17B_SCHPO (60S ribosomal protein L17-B OS=Schizosaccharomyces pombe GN=rpl17b PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.333e-32 Identity = 63/97 (64.95%), Postives = 73/97 (75.26%), Query Frame = -1 Query: 278 RAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 568 +A+PF RF GGVGRTAQ K Q RWPVKS F DLLKNAE+NAE KGLD+D L I H+QVN A KQRRRTYRAHGR+ Y+SSP HIE+ ++ Sbjct: 56 QAVPFRRFNGGVGRTAQGKEFGVT-QARWPVKSVNFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVA 151 HSP 2 Score: 31.187 bits (69), Expect = 2.333e-32 Identity = 15/31 (48.39%), Postives = 20/31 (64.52%), Query Frame = -3 Query: 567 FKNTRETAHAIRKLPLTKAKRYLEDVMAHKQ 659 FKN+RE A I + L KA +L++V HKQ Sbjct: 26 FKNSREVAFTINGMNLKKAFIFLDNVKEHKQ 56
BLAST of CN185474 vs. ExPASy Swiss-Prot
Match: RL17_THEPA (60S ribosomal protein L17 OS=Theileria parva GN=RPL17 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.153e-32 Identity = 60/94 (63.83%), Postives = 72/94 (76.60%), Query Frame = -1 Query: 287 RAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 568 R +PF +F GGVGR AQAK + QGRWP KS KF+LDLLKN ESNAEVKGL+ L + H+QVN+A RRR+YRAHGRI P++S PCH+EL Sbjct: 56 RCVPFRKFRGGVGRCAQAK-AFKHTQGRWPEKSCKFLLDLLKNLESNAEVKGLEQSKLRLEHVQVNRAPVGRRRSYRAHGRIIPFLSHPCHVEL 148 HSP 2 Score: 35.039 bits (79), Expect = 5.153e-32 Identity = 17/31 (54.84%), Postives = 22/31 (70.97%), Query Frame = -3 Query: 567 FKNTRETAHAIRKLPLTKAKRYLEDVMAHKQ 659 FKNT ETA AI+ + + AKRYL DV+ K+ Sbjct: 26 FKNTYETATAIKGMLVKDAKRYLNDVIERKR 56
BLAST of CN185474 vs. ExPASy Swiss-Prot
Match: RL17_THEAN (60S ribosomal protein L17 OS=Theileria annulata GN=RPL17 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.711e-32 Identity = 60/94 (63.83%), Postives = 72/94 (76.60%), Query Frame = -1 Query: 287 RAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 568 R +PF +F GGVGR AQAK + QGRWP KS KF+LDLLKN ESNAEVKGL+ L + H+QVN+A RRR+YRAHGRI P++S PCH+EL Sbjct: 56 RCVPFRKFRGGVGRCAQAK-AFKHTQGRWPEKSCKFLLDLLKNLESNAEVKGLEQSKLRLEHVQVNRAPVGRRRSYRAHGRIIPFLSHPCHVEL 148 HSP 2 Score: 34.6538 bits (78), Expect = 6.711e-32 Identity = 17/31 (54.84%), Postives = 22/31 (70.97%), Query Frame = -3 Query: 567 FKNTRETAHAIRKLPLTKAKRYLEDVMAHKQ 659 FKNT ETA AI+ + + AKRYL DV+ K+ Sbjct: 26 FKNTYETATAIKGMLVKDAKRYLNDVIDRKR 56
BLAST of CN185474 vs. ExPASy Swiss-Prot
Match: RL17_AEDAL (60S ribosomal protein L17 OS=Aedes albopictus GN=RpL17 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.252e-31 Identity = 68/111 (61.26%), Postives = 84/111 (75.68%), Query Frame = -1 Query: 278 RRLRGIWRMLWPINRAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 610 RR + + + +PF RF GGVGR AQAK+ + + GRWP KSA+F+L LLKNAE+NA+ +GLDVD L + HIQVN+A RRRTYRAHGRINPYMSSPCHIEL+L+ Sbjct: 42 RRAQKFLKNVCEKKECVPFRRFNGGVGRCAQAKHWNTS-VGRWPKKSAEFLLQLLKNAEANADYRGLDVDRLVVDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIELSLT 151
BLAST of CN185474 vs. ExPASy Swiss-Prot
Match: RL17_AEDAE (60S ribosomal protein L17 OS=Aedes aegypti GN=RpL17 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.252e-31 Identity = 68/111 (61.26%), Postives = 84/111 (75.68%), Query Frame = -1 Query: 278 RRLRGIWRMLWPINRAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 610 RR + + + +PF RF GGVGR AQAK+ + + GRWP KSA+F+L LLKNAE+NA+ +GLDVD L + HIQVN+A RRRTYRAHGRINPYMSSPCHIEL+L+ Sbjct: 42 RRAQKFLKNVCEKKECVPFRRFNGGVGRCAQAKHWNTS-VGRWPKKSAEFLLQLLKNAEANADYRGLDVDRLVVDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIELSLT 151
BLAST of CN185474 vs. ExPASy Swiss-Prot
Match: RL17_DROPS (60S ribosomal protein L17 OS=Drosophila pseudoobscura pseudoobscura GN=RpL17 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.017e-31 Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = -1 Query: 278 RRLRGIWRMLWPINRAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 610 RR + + + +PF RF GGVGR AQAK + QGRWP KSA+F+L LL+NAE+NA+ KGLD D + + HIQVN+AQ RRRTYRAHGRINPYMSSPCH+E+ L+ Sbjct: 42 RRAQRFLKAVIDQKECVPFRRFNGGVGRCAQAK-QWKTTQGRWPKKSAEFLLQLLRNAEANADCKGLDADRMVVHHIQVNRAQCLRRRTYRAHGRINPYMSSPCHVEVILT 151 The following BLAST results are available for this feature:
BLAST of CN185474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185474 ID=CN185474; Name=CN185474; organism=Citrus sinensis; type=EST; length=661bpback to top |