CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_NEUCR (Peptidyl-prolyl cis-trans isomerase B OS=Neurospora crassa GN=cpr-2 PE=3 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22
Identity = 65/144 (45.14%), Postives = 86/144 (59.72%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            LG I   +    VPKTAENF AL     G+ Y+G+ FHR IK FMIQ             SI+G KF DE    LKH+ +G+LSMAN+G +TNGSQFFI+      L+G + VFG V+ G++V++ +E  +TG  D P   I+I
Sbjct:   48 LGRIVMGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKQFMIQGGDFTKGDGTGGKSIYGDKFPDE-NFKLKHSKKGLLSMANAGKDTNGSQFFITTVITSWLDGKHVVFGEVLEGYDVVEKIENTKTGPRDAPAEPIKI 190          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22
Identity = 65/135 (48.15%), Postives = 81/135 (60.00%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG I  ++  D VPKTA NF ALC    GY Y G+ FHR I  FM+Q             SI+G+KF DE   +LKHN  G+LSMAN+GPNTNGSQFFI+    P L+G + VFG V  G +V+  +E   + SG
Sbjct:   15 LGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDE-NFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSG 148          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_BOVIN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Bos taurus GN=PPID PE=1 SV=6)

HSP 1 Score: 105.145 bits (261), Expect = 3.533e-22
Identity = 64/146 (43.84%), Postives = 82/146 (56.16%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASG-----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRP 435
            +G I  E+  D VPKTAENF ALC              ++ G  FHR IK FMIQ             SI+G+KF DE     KH+  G+LSMAN+G NTNGSQFFI+    PHL+G + VFG+VI G  V  ++E  +   G++P
Sbjct:   29 VGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDE-NFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEV-KGEKP 172          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_ASPOR (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus oryzae GN=cpr6 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.533e-22
Identity = 65/139 (46.76%), Postives = 82/139 (58.99%), Query Frame = 1
Query:   70 VPKTAENFLALCASG----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            VPKTAENF ALC             ++ G+IFHR IK FMIQ             SI+G+KF DE  E LKH+   +LSMANSGP TNGSQFFI+    PHL+G + VFG VI+G  V+  +E   T   D+P+ ++ I
Sbjct:   31 VPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFE-LKHDKPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKVENMNT-QADKPVKDVTI 167          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIE_DROME (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.615e-22
Identity = 68/134 (50.75%), Postives = 77/134 (57.46%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA--SGY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            G I   +  D VPKTAENF  LC    GY Y G  FHR I  FM Q             SI+GKKFNDE   +LKHN+ G LSMANSG NTNGSQFFI   K   L+  + VFG VI G EV+  ME+  + SG
Sbjct:  153 GRIVMLLRADVVPKTAENFRQLCTHEQGYGYKGCSFHRVIPEFMCQGGDFTNNNGTGGKSIYGKKFNDE-NFNLKHNSFGTLSMANSGANTNGSQFFICTTKTDWLDNKHVVFGHVISGAEVVRKMERCGSKSG 285          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 64/146 (43.84%), Postives = 82/146 (56.16%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASG-----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRP 435
            +G I  E+  D VPKTAENF ALC              ++ G  FHR IK FMIQ             SI+G+KF DE     KH+  G+LSMAN+G NTNGSQFFI+    PHL+G + VFG+VI G  V  ++E  +   G++P
Sbjct:   29 VGRIVLELFADIVPKTAENFRALCTGEKGIGHTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDE-NFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEV-KGEKP 172          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_AMAMU (Peptidyl-prolyl cis-trans isomerase D OS=Amanita muscaria GN=Cyp40 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 65/144 (45.14%), Postives = 82/144 (56.94%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA-------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRP 435
            G +   +  D VPKTAENF ALC        SG   +Y G+ FHR IKGFM Q             SI+G+KF DE    + H+   +LSMAN+GPNTNGSQFFI+ +  PHL+G + VFG VI G  V+  +E     +GD P
Sbjct:   19 GRVAFRLYSDLVPKTAENFRALCTGEKGLGQSGKPLWYKGSAFHRVIKGFMCQGGDFTAGNGTGGESIYGEKFEDE-GFPVHHSRPFLLSMANAGPNTNGSQFFITVSATPHLDGKHVVFGEVIKGRSVVRTIENNPATNGDVP 161          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 64/149 (42.95%), Postives = 83/149 (55.70%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCA--------SGYYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            LG I   +    VPKT ENF  L          +  Y G+ FHR IK FMIQ             SI+G++F DE    LKH   G LSMAN+GPNTNG+QFFI+  + P L+G + VFG+V+ G  V+  +E  QT S DRP+  ++I
Sbjct:   45 LGRIIIGLFGKTVPKTVENFKQLSIGTTLKDGRTAAYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGERFPDE-NFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKVVEGMSVVRQIENMQTDSRDRPVKSVKI 192          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 67/150 (44.67%), Postives = 82/150 (54.67%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--------GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            LG I   +    VPKTAENF AL           GY Y+G+ FHR IK FMIQ             SI+G KF DE    LKH   G+LSMAN+G +TNGSQFFI   K   L+  + VFG V+ G +V+  ME  +T  GD+P+  I I
Sbjct:   58 LGRIVMGLYGKTVPKTAENFRALATGKNSDGEDLGYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDE-NFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVLEGMDVVYAMENVKTSRGDKPVEPITI 206          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_DROME (Peptidyl-prolyl cis-trans isomerase OS=Drosophila melanogaster GN=Cyp1 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 66/135 (48.89%), Postives = 78/135 (57.78%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG I  E+  D VPKTAENF ALC    G+ Y G+IFHR I  FM Q             SI+G KF DE  E LKH   GILSMAN+G NTNGSQFFI   K   L+  + VFG V+ G +V+  +E   + SG
Sbjct:   80 LGRIVMELRSDVVPKTAENFRALCTGEKGFGYKGSIFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFPDENFE-LKHTGSGILSMANAGANTNGSQFFICTVKTAWLDNKHVVFGEVVEGLDVVKKIESYGSQSG 213          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PPIB_NEUCR2.705e-2245.14Peptidyl-prolyl cis-trans isomerase B OS=Neurospor... [more]
CYPH_SCHPO2.705e-2248.15Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]
PPID_BOVIN3.533e-2243.8440 kDa peptidyl-prolyl cis-trans isomerase OS=Bos ... [more]
PPID_ASPOR3.533e-2246.76Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]
PPIE_DROME4.615e-2250.75Peptidyl-prolyl cis-trans isomerase E OS=Drosophil... [more]
PPID_HUMAN6.027e-2243.8440 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]
PPID_AMAMU6.027e-2245.14Peptidyl-prolyl cis-trans isomerase D OS=Amanita m... [more]
PPIB_SCHJA6.027e-2242.95Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIB_CRYNE6.027e-2244.67Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
PPIA_DROME6.027e-2248.89Peptidyl-prolyl cis-trans isomerase OS=Drosophila ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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