CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPWD1_HUMAN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Homo sapiens GN=PPWD1 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.090e-29
Identity = 66/153 (43.14%), Postives = 89/153 (58.17%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTG-SGDRPLAEIRINRVTI 468
            S  +HT++GDI  ++   E PKT ENF     +GYY+G  FHR IKGFMIQ            SIWG +F DE   +L+H+    LSMAN+G NTNGSQFFI+    P L+  +TVFGRV  G EV+  +   +     D+P  ++ I  +T+
Sbjct:  493 SAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV 645          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPWD1_BOVIN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Bos taurus GN=PPWD1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.090e-29
Identity = 66/153 (43.14%), Postives = 89/153 (58.17%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTG-SGDRPLAEIRINRVTI 468
            S  +HT++GDI  ++   E PKT ENF     +GYY+G  FHR IKGFMIQ            SIWG +F DE   +L+H+    LSMAN+G NTNGSQFFI+    P L+  +TVFGRV  G EV+  +   +     D+P  ++ I  +T+
Sbjct:  491 SAIIHTSMGDIHIKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV 643          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPWD1_MOUSE (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Mus musculus GN=Ppwd1 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.934e-28
Identity = 66/153 (43.14%), Postives = 89/153 (58.17%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTG-SGDRPLAEIRINRVTI 468
            S  +HT++GDI  ++   E PKT ENF     +GYY+G  FHR IKGFMIQ            SIWG +F DE   +L+H+    LSMAN+G NTNGSQFFI+    P L+  +TVFGRV  G EV+  +   +     D+P  ++ I  +T+
Sbjct:  493 SAIVHTSMGDIHIKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVSKGMEVVQRIFNVKVNPQTDKPYEDVSIINITV 645          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP15_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizopus oryzae GN=cyp15 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.526e-28
Identity = 65/152 (42.76%), Postives = 85/152 (55.92%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            S  + T  GDI   +  D  PK  ENF     +GYYD  IFHR IKGFMIQ            SIWG  F DE     +H+    +SMAN+GPNTNGSQFFI+ A    L+  ++VFGRV  G +V+  +E A+    ++PL +I+I  + I
Sbjct:  478 SAIIRTTSGDIHMRLFPDAAPKAVENFTTHAKNGYYDNLIFHRVIKGFMIQTGCPFGDGTGGESIWGDDFEDEFSREFRHDRPYTVSMANAGPNTNGSQFFITVAPTTWLDNKHSVFGRVTAGMDVVHSIESAKVDKTNKPLDDIKIINIDI 629          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL3_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Aspergillus fumigatus GN=cyp10 PE=3 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 5.628e-28
Identity = 89/211 (42.18%), Postives = 109/211 (51.66%), Query Frame = 1
Query:   10 MSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQ------------------XXXXXXXXXXXXSIW-GKKFNDEIR-ESLKHNARGILSMAN--------------SGPNTNGSQFFISYAKQPHLNGLYTVFGRVIH------GFEVLDLMEKA-----------QTGSGDRPLAE-IRINRVTIHANPLA 486
            MSVTLHT  GD+K E+ C+ VP+TAENFLALCA G Y+ T FHR   GFMIQ                              SI+  +  N EI   +L+HNARGILSMA+              +G   NGSQFFI++A  PHL+G  TVFG+V++      G +VL  +EKA           Q   G+    E I IN VTIHANP A
Sbjct:    1 MSVTLHTTHGDLKVELFCEAVPQTAENFLALCACGAYNNTPFHRIFPGFMIQGGDISLGPAPGTLNTLKPMLPVNEIPKGGTSIYHPRALNQEIHLPALRHNARGILSMASRPVKDRTAPGSQGATGATVNGSQFFITFAAAPHLDGASTVFGKVLNLSPQDEGGDVLSKLEKAKLKVDKKGRVTQPKEGEEGGYEAIGINSVTIHANPFA 211          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: BPPI_STRP6 (Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase OS=Streptococcus pyogenes serotype M6 GN=M6_Spy1377 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.600e-28
Identity = 74/180 (41.11%), Postives = 97/180 (53.89%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFF------ISYAKQ---------------------PHLNGLYTVFGRVIH--GFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            VT+ TN GD+   +  D  PKT  NFL L   GYYDG IFHR I  FMIQ            SI+G+ F DE  + L +N RG LSMAN+GPNTNGSQFF      I YAK+                     PHL+  +TVFG+++    F+VLDL+   +TG+ D+P  ++ I  + +
Sbjct:  290 VTIKTNHGDMTLVLFPDHAPKTVANFLGLAKEGYYDGIIFHRIIPEFMIQGGDPTGTGMGGQSIYGESFEDEFSDEL-YNLRGALSMANAGPNTNGSQFFIVQNSKIPYAKKELERGGWPTPIAAAYAENGGTPHLDRRHTVFGQLVDETSFQVLDLIAGVETGAQDKPKEDVIIETIEV 468          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.061e-26
Identity = 73/150 (48.67%), Postives = 92/150 (61.33%), Query Frame = 1
Query:   25 HTNLGDIKCEIACDEVPKTAENFLALCA-------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLA 441
            +T LG +  E+  D VPKTAENF ALC        SG   +Y G+ FHR IK FM+Q             SI+G+ FNDE    +KH   G LSMAN+G NTNGSQFFI+ A+ PHLNG +TVFG V+ GF+++  +E A+T   DRP A
Sbjct:   17 NTPLGRVVFELYNDIVPKTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIKNFMVQGGDFTHGTGIGGESIYGRTFNDE-NFLVKHKI-GCLSMANAGKNTNGSQFFITTAETPHLNGGHTVFGEVVEGFDIVKKVENAETDRSDRPKA 164          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP5_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizopus oryzae GN=cyp5 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.386e-26
Identity = 71/150 (47.33%), Postives = 95/150 (63.33%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA-------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            G +  ++  D VPKTAENF ALC        SG   +Y G+ FHR I GFM Q             SI+G KFNDE   +LKH  +G+LSMAN+GPNTNGSQFFI++ K P L+G +TVFG+++ G +VL+++E+  T SG  P A++ I
Sbjct:   21 GRLTFKLFSDTVPKTAENFRALCTGEKGTGVSGKPLHYKGSHFHRIIPGFMAQGGDFTMGNGRGGESIYGHKFNDE-NFTLKHTGKGVLSMANAGPNTNGSQFFITFDKTPWLDGNHTVFGQLVEGNQVLEILEQHGTQSG-MPTAKVEI 168          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP11_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizopus oryzae GN=cyp11 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.386e-26
Identity = 69/152 (45.39%), Postives = 86/152 (56.58%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASG-----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            +G I  E+  D+VPKTAENF ALC              +Y G+IFHR IKGFM Q             SI+G  F DE   S KH+  G+LSMAN GPNT  SQFFI+    PHL+G + VFGRV+ G+ V+++ME       DRPL  + I
Sbjct:   17 IGRIVIELFADQVPKTAENFRALCTGEKGIGKVSNMPLHYKGSIFHRIIKGFMCQGGDFTHRTGKGGESIYGANFPDE-SFSRKHDTHGLLSMANRGPNTQTSQFFITTRPTPHLDGKHVVFGRVVSGYNVVEMMENEPVDDQDRPLHNVMI 167          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: SDC10_DANRE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Danio rerio GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.880e-26
Identity = 62/157 (39.49%), Postives = 88/157 (56.05%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHG--FEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 480
            V L T+ GDI  E+   E PK   NF+ LC  GYYDGTIFHR +  F++Q            SI+G+ F DE    L+ N RG+++MAN+GP+ NGSQFF +  +   LN  +T+FG+V     + +L L + A  G  +RPL   +I    +  +P
Sbjct:   15 VLLKTSAGDIDIELWSKETPKACRNFVQLCMEGYYDGTIFHRMVPEFIVQGGDPTGTGTGGESIYGRPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVTGDTVYNMLRLADVACDGD-ERPLNPHKIRSTEVLHSP 170          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PPWD1_HUMAN5.090e-2943.14Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPWD1_BOVIN5.090e-2943.14Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPWD1_MOUSE1.934e-2843.14Peptidylprolyl isomerase domain and WD repeat-cont... [more]
CYP15_RHIOR2.526e-2842.76Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizo... [more]
PPIL3_ASPFU5.628e-2842.18Peptidyl-prolyl cis-trans isomerase-like 3 OS=Aspe... [more]
BPPI_STRP69.600e-2841.11Putative bifunctional phosphatase/peptidyl-prolyl ... [more]
PPID_DICDI1.061e-2648.67Peptidyl-prolyl cis-trans isomerase D, mitochondri... [more]
CYP5_RHIOR1.386e-2647.33Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizop... [more]
CYP11_RHIOR1.386e-2645.39Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizo... [more]
SDC10_DANRE6.880e-2639.49Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Da... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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