CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: SDC10_XENLA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xenopus laevis GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.002e-25
Identity = 60/157 (38.22%), Postives = 87/157 (55.41%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQT--GSGDRPLAEIRINRVTIHANP 480
            V L T  G+I  E+   E PK   NF+ LC  GYYD TIFHR +  F+IQ            S++GK F DE    L+ N RG+++MAN+GP+ NGSQFF +  +   LN  +T+FG+V  G  + +++  A+   G  +RP+   +I    +  NP
Sbjct:   15 VLLKTTAGEIDIELWSKEAPKACRNFVQLCLEGYYDNTIFHRVVPEFIIQGGDPTGTGTGGESVFGKPFRDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTIYNILRLAEVDIGEDERPVNPHKIKCTEVLFNP 170          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIH_USTMA (Peptidyl-prolyl cis-trans isomerase H (Fragment) OS=Ustilago maydis GN=CYP3 PE=3 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.002e-25
Identity = 67/153 (43.79%), Postives = 87/153 (56.86%), Query Frame = 1
Query:   28 TNLGDIKCEIACDEVPKTAENFLALCASGY--------YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINR 459
            T  G +KCE+  D VP+T+ENF  LC   +        Y  +IFHR IK FM Q             SI+G KF+DE   +LKH+  G+LSMANSGP TNG QFFI+    P L+G + VFG+V+ G   L  ME   TG+ +RP   +RI +
Sbjct:    1 TPAGRLKCELFSDIVPRTSENFRQLCTGEFRPNHVPEGYKNSIFHRIIKDFMCQGGDFINADGTGSRSIYGDKFDDE-NFTLKHDKAGLLSMANSGPGTNGCQFFITAQPCPFLDGKHVVFGKVVDGLLTLRKMENVPTGANNRPKMAVRITQ 152          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.002e-25
Identity = 70/152 (46.05%), Postives = 90/152 (59.21%), Query Frame = 1
Query:   31 NLGDIKCEIACDEVPKTAENFLALCA-------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            ++G I  E+  D VPKTA+NF +LC        SG   +Y G++FHR IK FMIQ             SI+G KF+DE    +KH    +LSMAN+GPNTNGSQFFI+    PHL+G + VFG V++G  V+  +E   T SGDRP  E  I
Sbjct:   23 SVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFP-IKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSGDRPAKEALI 173          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_ASHGO (Peptidyl-prolyl cis-trans isomerase D OS=Ashbya gossypii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.002e-25
Identity = 69/153 (45.10%), Postives = 91/153 (59.48%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCASGY------------YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRIN 456
            G +  E+  D  PKTAENF+ LCA               Y G++FHR IKGFM Q             SI+G+KF DE   + KH+   +LSMAN+GPNTNGSQ FI+ A  PHL+G + VFG VI G  V+  +E+ +T + DRPLA++RI+
Sbjct:   19 GRVVFEVYSDVTPKTAENFVRLCAGDAGECRTKPGVPLCYQGSLFHRVIKGFMCQFGDFTNGDGTGGESIYGEKFEDE-NFARKHDRPFLLSMANAGPNTNGSQCFITCAPTPHLDGKHVVFGEVIQGKRVVRAIERQET-AADRPLADVRID 169          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CWC27_RHIOR (Peptidyl-prolyl isomerase cwc27 OS=Rhizopus oryzae GN=cwc27 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.002e-25
Identity = 63/157 (40.13%), Postives = 85/157 (54.14%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHG--FEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 480
            V LHT  GDI+ E+   E P+   NF+ LC  GYYD TIFHR + GF++Q            S++   F DE    L+ N RG++ +AN+G N NGSQFFI+  +   L   +T+FGRV     F V+ + E  +    +RPL   RI R  I  NP
Sbjct:   15 VILHTTSGDIEIELWGKEAPRATRNFIQLCLEGYYDNTIFHRIVPGFLVQGGDPTGTGQGGESVYEDGFPDEFHSRLRFNRRGLVGVANTGQNDNGSQFFITLDRADELTKRHTLFGRVAGDTLFNVMKMTE-LEIDENERPLYPPRIKRTEIVINP 170          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPX_USEUD (Peptidyl-prolyl cis-trans isomerase OS=Unspecified eudicot DB-1992 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.614e-25
Identity = 66/140 (47.14%), Postives = 86/140 (61.43%), Query Frame = 1
Query:   67 EVPKTAENFLALCA-------SGY---YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            +VPKTAENF ALC        SG    Y+G++FHR I  FM+Q             SI+G KF DE     KH   G+LSMAN+GP TNGSQFFI+    PHL+G + VFG+V+ G +V+  +E  QT  GD+PL+E++I
Sbjct:   25 DVPKTAENFRALCTGEKGIGPSGKKMTYEGSVFHRVIPKFMLQGGDFTLGNGRGGESIYGAKFADE-NFIHKHTTPGLLSMANAGPGTNGSQFFITTVATPHLDGKHVVFGKVVEGMDVVRKIEATQTDRGDKPLSEVKI 163          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CWC27_CRYNE (Peptidyl-prolyl isomerase CWC27 OS=Cryptococcus neoformans GN=CWC27 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.414e-25
Identity = 66/158 (41.77%), Postives = 88/158 (55.70%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGP-NTNGSQFFISYAKQPHLNGLYTVFGRVIHG--FEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 480
            V + T  G+I+ E+   E PK   NFLAL   GYYDG IFHR + GF+IQ            S +G+ F DEI   LK N RG+L MAN+G  N+N SQFFI+    P L   +T+FG+++    F VL++     T   +RPL   +I R+ I  NP
Sbjct:   15 VIIDTTAGEIEVELWGKECPKAVRNFLALTMEGYYDGVIFHRVVPGFIIQSGDPTGTGMGGESFYGEPFEDEIHGRLKFNRRGLLGMANNGSRNSNTSQFFITLDAAPELTNKHTMFGKIVGNTIFNVLNI-GNLDTDKEERPLIPPKIRRIHIIENP 171          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_CANGA (Peptidyl-prolyl cis-trans isomerase D OS=Candida glabrata GN=CPR6 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.459e-25
Identity = 73/156 (46.79%), Postives = 93/156 (59.62%), Query Frame = 1
Query:   28 TNLGDIKCEIACDEVPKTAENFLALCA--SGY----------YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG-DRPLAEIRI 453
            T  G I  E+  D VPKTAENFL LC   SG           Y G+IFHR IK FMIQ             SI+G+KF DE  E +KH+   +LSMAN+GPNTNGSQ FI+    PHL+G + VFG VI G  ++ L+EK QT  G D+P+ ++++
Sbjct:   15 TPKGRIVFELYKDVVPKTAENFLKLCEGKSGMAKSKPDVPLSYKGSIFHRVIKDFMIQFGDFTNFDGTGGESIYGEKFEDENFE-IKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIEGKRLVRLIEKQQTEDGTDKPMHDVKV 169          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: SDC10_MOUSE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mus musculus GN=Sdccag10 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.607e-25
Identity = 61/157 (38.85%), Postives = 83/157 (52.87%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGD--RPLAEIRINRVTIHANP 480
            V L T  GDI  E+   E PK   NF+ LC   YYD TIFHR + GF++Q            SI+G  F DE    L+ N RG+++MAN+GP+ NGSQFF +  +   LN  +T+FG+V  G  V +++   +    D  RP    RI    +  NP
Sbjct:   15 VLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGTGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLTEVDIDDEERPRNPHRIKSCEVLFNP 170          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: SDC10_RAT (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Rattus norvegicus GN=Sdccag10 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 9.935e-25
Identity = 60/157 (38.22%), Postives = 83/157 (52.87%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGD--RPLAEIRINRVTIHANP 480
            V L T  GDI  E+   E PK   NF+ LC   YYD TIFHR + GF++Q            S++G  F DE    L+ N RG+++MAN+GP+ NGSQFF +  +   LN  +T+FG+V  G  V +++   +    D  RP    RI    +  NP
Sbjct:   15 VLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGTGGESVYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLTEVDIDDEERPRNPHRIKSCEVLFNP 170          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
SDC10_XENLA2.002e-2538.22Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xe... [more]
PPIH_USTMA2.002e-2543.79Peptidyl-prolyl cis-trans isomerase H (Fragment) O... [more]
PPID_GIBZE2.002e-2546.05Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
PPID_ASHGO2.002e-2545.10Peptidyl-prolyl cis-trans isomerase D OS=Ashbya go... [more]
CWC27_RHIOR2.002e-2540.13Peptidyl-prolyl isomerase cwc27 OS=Rhizopus oryzae... [more]
CYPX_USEUD2.614e-2547.14Peptidyl-prolyl cis-trans isomerase OS=Unspecified... [more]
CWC27_CRYNE3.414e-2541.77Peptidyl-prolyl isomerase CWC27 OS=Cryptococcus ne... [more]
PPID_CANGA4.459e-2546.79Peptidyl-prolyl cis-trans isomerase D OS=Candida g... [more]
SDC10_MOUSE7.607e-2538.85Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mu... [more]
SDC10_RAT9.935e-2538.22Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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