CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL3_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Neurospora crassa GN=cyp-10 PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.248e-43
Identity = 93/166 (56.02%), Postives = 111/166 (66.87%), Query Frame = 1
Query:   10 MSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXX-----SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVI--HGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANPLA 486
            MSVTLHT LGD+K EI C+ VPKTAENFLALCASGYY+ + FHR I  FM+Q                 SI+G  F DEIR  L+HN RGI+SMAN GPNTNGSQFFI + K PHL+GL TVFG++I     + L  +E  +    +R   E+RI RVT+HANPLA
Sbjct:    1 MSVTLHTTLGDLKIEIFCESVPKTAENFLALCASGYYNASPFHRMIPSFMVQTGAPANPSPPENPKGGRSIYGPTFEDEIRPVLRHNERGIVSMANKGPNTNGSQFFILFDKAPHLDGLNTVFGKLIGDESLQTLAKLEGLEVDKKNRIKEEVRIERVTVHANPLA 166          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL2_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo sapiens GN=PPIL2 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.371e-40
Identity = 80/156 (51.28%), Postives = 101/156 (64.74%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTG-SGDRPLAEIRINRVTIHANP 480
            V LHTN GD+  E+ CD  PKT ENF+ LC   YYDGTIFHR+I+ F+IQ            S WGK F DE R +L H  RGILSMANSGPN+N SQFFI++    +L+  +T+FGRV+ GF+VL  ME  ++    DRP  EIRI+  T+  +P
Sbjct:  282 VRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFVDP 437          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL2_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus musculus GN=Ppil2 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.062e-38
Identity = 77/156 (49.36%), Postives = 98/156 (62.82%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTG-SGDRPLAEIRINRVTIHANP 480
            V LHTN GD+  E+ CD  PKT ENF+ LC   YYDGTIFHR+I+ F+IQ            S WGK F DE R +L H  RG+LSMANSGPNTN SQFFI++    +L+  +T+FGRV+ GF+ L  ME  ++    DRP  E+ I   T+  +P
Sbjct:  282 VRLHTNKGDLNLELHCDLTPKTCENFIKLCKKQYYDGTIFHRSIRNFVIQGGDPTGTGTGGESFWGKPFKDEFRPNLSHTGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTAMENVESDPKTDRPKEEVLICTTTVFVDP 437          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL2_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhizopus oryzae GN=cyp14 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.999e-38
Identity = 76/151 (50.33%), Postives = 100/151 (66.23%), Query Frame = 1
Query:   28 TNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 480
            TN G+I  E+  D+ PKT  NF+ L  +GYY+  IFHRNIK FMIQ            SIW + F DEI+ +LKH+ARG+LSMAN G +TNGSQFFI+YA  PHL+GL+TVFG+V+ G +VL  +E       DRP  EI+I ++ +  +P
Sbjct:  292 TNYGNINVELFSDKKPKTCHNFIELAKTGYYNDVIFHRNIKKFMIQGGDPTGTGKGGESIWKRYFPDEIKTTLKHDARGVLSMANRGKDTNGSQFFITYAAAPHLDGLHTVFGKVVGGLDVLSKLESIPVDEKDRPEREIKIKQIQMFVDP 442          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL2_ARATH (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana GN=PUB49 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.478e-36
Identity = 73/155 (47.10%), Postives = 90/155 (58.06%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 480
            V   T  GD+  E+ CD  P+  ENF+ LC  GYY+G  FHR+I+ FMIQ            SIWGK F DE    L H+ RG++SMANSGP+TNGSQFF+ Y    HLN  +TVFG V+ G   L  ME       DRPL EI+I   ++  NP
Sbjct:  346 VQFQTTHGDLNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGKGGESIWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENVPVDESDRPLEEIKIIEASVFVNP 500          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPE_DICDI (Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyostelium discoideum GN=cypE PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.108e-35
Identity = 77/153 (50.33%), Postives = 97/153 (63.40%), Query Frame = 1
Query:    7 KMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVT 465
            + +VTL T +GDI  E+  +  PK  +NF  L   GYYD TIFHR IK FMIQ            SI+GKKF DEI + LKH   GILSMANSG N+NGSQFFI++   P L+G +T+FGRV  G +V+  M   QT + D+P+ EIRI + T
Sbjct:    3 EQTVTLQTTVGDITLELYYNHAPKACKNFYELSKRGYYDNTIFHRLIKDFMIQGGDPLGNGRGGESIYGKKFEDEITKELKHTGAGILSMANSGVNSNGSQFFITFGPTPWLDGKHTIFGRVKSGMKVVQKMNAMQT-NNDKPIDEIRIIKAT 154          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL2_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizosaccharomyces pombe GN=cyp8 PE=2 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 3.081e-34
Identity = 73/151 (48.34%), Postives = 87/151 (57.62%), Query Frame = 1
Query:   28 TNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 480
            TN G+I  E+  D  P    NF+ L   GYY  TIFHRNI  FMIQ            SIWGK F DE    LKH+ RGI+SMAN G NTNGSQFFI Y    HL+  +T+FGRV+ G  VLD +EK  T S D P   I++  + I  +P
Sbjct:  282 TNHGEINIELHTDYAPHAVYNFVQLAKQGYYRNTIFHRNIARFMIQGGDPSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPKLPIKLEDIIIFVDP 432          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL1_EMENI (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emericella nidulans GN=cyp1 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.864e-34
Identity = 72/151 (47.68%), Postives = 91/151 (60.26%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            VT  T++G    E+     PKT +NF  L   GYY+  IFHR I  FM+Q            SI+G+KF DEIR  LKH   GILSMANSGPNTNGSQFFI+ A  P L+G +T+FGRV  G  ++  M   +T + DRPL E++I R  +
Sbjct:    5 VTFDTSMGSFTVELYNSHAPKTCKNFATLAQRGYYNNVIFHRIIPNFMVQTGDPTGTGRGGSSIYGEKFEDEIRSDLKHTGAGILSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRIIQRMGLVKTNNEDRPLDEVKILRAKV 155          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL2_USTMA (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Ustilago maydis GN=CYP8 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.997e-33
Identity = 77/163 (47.24%), Postives = 97/163 (59.51%), Query Frame = 1
Query:    7 KMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRE--SLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFE--VLDLMEKAQTGSG-DRPLAEIRINRVTIHANP 480
            K  V L TN G +  E+ C + PKT  NFL LC  G YD T+FHRNI GFMIQ            SIW   F DE  E  + KH+ RG+LSMAN G +TN SQFFI+Y   PHL+G +TVFGR++ G +   L  ME+  +  G DRPL +I+I  V +  +P
Sbjct:  292 KAYVRLSTNFGALNLELHCGKAPKTCFNFLQLCKHGKYDDTLFHRNIPGFMIQGGDPTGTGRGGSSIWNSNFRDEFNEPGAFKHDTRGVLSMANKGKDTNASQFFITYRGVPHLDGKHTVFGRLVDGDKDATLTKMEQVPSEQGTDRPLKKIQIQDVLVTEDP 454          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL2_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryptococcus neoformans GN=CYP8 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.449e-33
Identity = 72/163 (44.17%), Postives = 98/163 (60.12%), Query Frame = 1
Query:    1 RGKMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRE--SLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQT-GSGDRPLAEIRINRVTIHANP 480
            + K   T+ TN G +  E+  D  PKT  NF+ L  +G YD  +FHR I GFM+Q            S WG+ F DE  E  + KH++RG+LSMANSGP TNGSQFF ++   PHL+G +TVFG+++ G E LD +E+      GDRP+ +I I  VT+  +P
Sbjct:  311 KSKAYATITTNFGPLNVELHGDRAPKTVYNFVQLAKAGKYDNVVFHRLIPGFMVQGGDPTGTGRGGESYWGEPFRDEHGEKGAYKHDSRGVLSMANSGPRTNGSQFFFTFRPTPHLDGKHTVFGKLVGGEETLDKIERVNVRPGGDRPVRDIVIQGVTVLQDP 473          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PPIL3_NEUCR1.248e-4356.02Peptidyl-prolyl cis-trans isomerase-like 3 OS=Neur... [more]
PPIL2_HUMAN8.371e-4051.28Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo... [more]
PPIL2_MOUSE2.062e-3849.36Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus ... [more]
PPIL2_RHIOR5.999e-3850.33Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhiz... [more]
PPIL2_ARATH1.478e-3647.10Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arab... [more]
CYPE_DICDI8.108e-3550.33Peptidyl-prolyl cis-trans isomerase cypE OS=Dictyo... [more]
PPIL2_SCHPO3.081e-3448.34Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizo... [more]
PPIL1_EMENI6.864e-3447.68Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emer... [more]
PPIL2_USTMA1.997e-3347.24Peptidyl-prolyl cis-trans isomerase-like 2 OS=Usti... [more]
PPIL2_CRYNE4.449e-3344.17Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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