CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPC_YEAST (Peptidyl-prolyl cis-trans isomerase C, mitochondrial OS=Saccharomyces cerevisiae GN=CPR3 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22
Identity = 69/146 (47.26%), Postives = 86/146 (58.90%), Query Frame = 1
Query:   28 TNLGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            T +G I+ E+  + VPKTAENF ALC    G+ Y G  FHR I  FMIQ             SI+G KF DE     KH+  G+LSMAN+GPNTNGSQFFI+    P L+G + VFG V  G +++  +E   T SG +P AEI I
Sbjct:   33 TKIGRIEFELYDNVVPKTAENFRALCTGEKGWGYKGVPFHRIIPDFMIQGGDTDLTNGFGGKSIYGSKFADE-NFVKKHDKAGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTKGMDIVKAIESYGTASG-KPRAEIVI 176          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CWC27_NEUCR (Peptidyl-prolyl isomerase cwc-27 OS=Neurospora crassa GN=cwc-27 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22
Identity = 67/184 (36.41%), Postives = 84/184 (45.65%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIW-------------------------GKKFNDEIRESLKHNARGILSMANSG-PNTNGSQFFISYAKQPHLNGLYTVFGRVIHG--FEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 480
            S  +HT  G+I  E+   + P T  NFL L   GYYD TIFHR I GF++Q            SI+                         G  F DE    LK N RG+L MAN G P+TN SQFF +  K   L G  T+FGRV     + +  + E      G+RPL  I+I R+ I  NP
Sbjct:   14 SAIIHTTQGEIAVELFAKQTPLTCRNFLQLALDGYYDNTIFHRLIPGFIVQGGDPSGTGHGGESIYDNGALSGDLDPWPMDQRRGKNAGPHGVNFKDEFHSRLKFNRRGLLGMANEGAPDTNSSQFFFTLGKADELTGKNTMFGRVAGDTIYNLAKIGEAEVEEGGERPLYPIKITRIEILINP 197          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22
Identity = 62/144 (43.06%), Postives = 86/144 (59.72%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            LG +   +    VPKTAENF AL     G+ Y+G+ FHR IK FMIQ             SI+G+KF DE    ++H  +G+LSMAN+G +TNGSQFFI+    P L+G + VFG V+ G+EV++ +E      GD+P   ++I
Sbjct:   33 LGRVVLGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKEFMIQGGDFTRGDGTGGKSIYGEKFKDE-NFKIRHTKKGLLSMANAGKDTNGSQFFITTVATPWLDGRHVVFGEVLEGYEVVEAIENVPKVPGDKPQQVVKI 175          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22
Identity = 63/144 (43.75%), Postives = 86/144 (59.72%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            LG I   +    VPKTAENF AL     G+ Y+G+ FHR IK FMIQ             SI+G KF DE    L+H  +G+LSMAN+G +TNGSQFFI+ A    L+G + VFG V+ G++++D ++    G  DRP  +++I
Sbjct:   48 LGRIVMGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKDFMIQGGDFTNGDGTGGKSIYGNKFEDE-NFKLRHTKKGVLSMANAGKDTNGSQFFITTAITAWLDGKHVVFGEVLEGYDIVDKIQVVPKGFQDRPTKDVKI 190          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_FELCA (Peptidyl-prolyl cis-trans isomerase A OS=Felis catus GN=PPIA PE=2 SV=3)

HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22
Identity = 64/135 (47.41%), Postives = 82/135 (60.74%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  ++  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF+DE    LKH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFG V  G  +++ ME+  + +G
Sbjct:   17 LGRVSFDLFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGMVKEGMNIVEAMERFGSRNG 150          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI1_STAHJ (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH1997 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22
Identity = 65/183 (35.52%), Postives = 92/183 (50.27%), Query Frame = 1
Query:    7 KMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLK-HNARGILSMANSGPNTNGSQFFISYAKQ----------------------------PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            ++ V +HTN GD+  ++  D  PKT ENF+    +GYYDG  FHR I  FMIQ            SI+G  F DE   SL+  N  G LSMAN+GPNTNGSQFF+   K+                            P L+  +TVFG++I G   L+ +   + G+ D+P+ ++ I  + +
Sbjct:   15 EIKVAMHTNKGDMTFKLFPDIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGSFEDEF--SLEAFNLYGALSMANAGPNTNGSQFFVVQMKEVPESMVNQLVDGGWPEPIAKAYADNGGTPWLDQKHTVFGQLIEGEATLEDIANTKVGAQDKPVHDVVIESIDV 195          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_HEMPU (Peptidyl-prolyl cis-trans isomerase OS=Hemicentrotus pulcherrimus PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22
Identity = 66/136 (48.53%), Postives = 80/136 (58.82%), Query Frame = 1
Query:   31 NLGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            NLG I  E+  D VPKTAENF ALC    G+ Y G+ FHR I GFM Q             SI+G+KF DE   +LKH   GILSMAN+G NTNGSQFFI  A    L+G + VFG V  G +++  +E   + SG
Sbjct:   16 NLGRIVMELRADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPGFMCQGGDFTRHNGTGGKSIYGEKFADE-NFTLKHTQPGILSMANAGVNTNGSQFFICTAVTSWLDGKHVVFGAVTQGLDIIKKVESYGSDSG 150          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.071e-22
Identity = 64/141 (45.39%), Postives = 76/141 (53.90%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCASG----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            G +  E+  D  PKTAENF ALC             +Y G+ FHR I GFM Q             SI+G KFNDE     KH   GILSMAN+GP TNGSQFFI  AK   LNG + VFG+V+ G +V+   E   + SG
Sbjct:   18 GRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDE-NFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAVGSSSG 157          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIH_CRYNE (Peptidyl-prolyl cis-trans isomerase H OS=Cryptococcus neoformans GN=CYP3 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22
Identity = 65/151 (43.05%), Postives = 81/151 (53.64%), Query Frame = 1
Query:   28 TNLGDIKCEIACDEVPKTAENFLALCASGY--------YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            T  G IK E+  D  PKTAENF  LC   +        Y    FHR I  FM+Q             SI+G +F DE    +KH   G+LSMANSGPNTNG QFFI+ A    L+G + VFGRVI G   +  +E   TG+ +RP  ++RI
Sbjct:   24 TPAGRIKMELFDDITPKTAENFRQLCTGEHRINSVPQGYKKATFHRVIPQFMVQGGDFVRGDGTGSFSIYGAQFEDE-NFKVKHTGPGLLSMANSGPNTNGCQFFITTAPAEFLDGKHCVFGRVIDGLLTVRKIENVPTGANNRPKLQVRI 173          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_ASPFU (Peptidyl-prolyl cis-trans isomerase D OS=Aspergillus fumigatus GN=cpr6 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.705e-22
Identity = 66/141 (46.81%), Postives = 81/141 (57.45%), Query Frame = 1
Query:   64 DEVPKTAENFLALCASGY----------YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            D VPKTAENF ALC              Y G+IFHR IK FMIQ             SI+G+KF DE  E LKH+   +LSMANSGP TNGSQFFI+    PHL+G + VFG VI+G  ++  +E   T   D+P  ++ I
Sbjct:   35 DVVPKTAENFRALCTGEKGVGKQRKPLSYKGSIFHRVIKQFMIQGGDFTNFNGTGGESIYGEKFPDENFE-LKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSIVRKIENMPT-QADKPTTDVTI 173          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
CYPC_YEAST1.214e-2247.26Peptidyl-prolyl cis-trans isomerase C, mitochondri... [more]
CWC27_NEUCR1.214e-2236.41Peptidyl-prolyl isomerase cwc-27 OS=Neurospora cra... [more]
PPIB_ASPOR1.586e-2243.06Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_ARTBE1.586e-2243.75Peptidyl-prolyl cis-trans isomerase B OS=Arthroder... [more]
PPIA_FELCA1.586e-2247.41Peptidyl-prolyl cis-trans isomerase A OS=Felis cat... [more]
PPI1_STAHJ1.586e-2235.52Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPIA_HEMPU2.071e-2248.53Peptidyl-prolyl cis-trans isomerase OS=Hemicentrot... [more]
CYPH_SOLLC2.071e-2245.39Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
PPIH_CRYNE2.705e-2243.05Peptidyl-prolyl cis-trans isomerase H OS=Cryptococ... [more]
PPID_ASPFU2.705e-2246.81Peptidyl-prolyl cis-trans isomerase D OS=Aspergill... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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