CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPH_UROFA (Peptidyl-prolyl cis-trans isomerase OS=Uromyces fabae GN=PIG28 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.027e-22
Identity = 66/136 (48.53%), Postives = 82/136 (60.29%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASGYYDG---TIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGF-EVLDLMEKAQTGSG 426
            LG I  E+  D VP+T  NF  LC +    G   +IFHR I  FMIQ             SI+GKKF DE  +  KH  RG+LSMAN+GPNTNGSQFFI+  K P L+G + VFG+VI G+ +V+  MEK  + SG
Sbjct:   15 LGRIVFELYDDVVPRTTNNFRQLCLNPPGKGFKHSIFHRVIPDFMIQGGDFTNGNGTGGESIYGKKFEDENFQK-KHVERGMLSMANAGPNTNGSQFFITVTKTPWLDGKHVVFGKVIEGYDQVVKAMEKTGSQSG 149          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 65/144 (45.14%), Postives = 81/144 (56.25%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCASG----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRP 435
            G I  E+  D VPKTAENF ALC             +Y G+ FHR IK FMIQ             SI+G KF DE    LKH+   +LSMAN+GP TNGSQFF++    PHL+G + VFG V+ G  V+  +E  +T  GD+P
Sbjct:   26 GRIVFELYNDIVPKTAENFRALCTGEKGVGKLGKPLHYKGSTFHRVIKQFMIQGGDFTAGNGTGGESIYGAKFEDE-NFQLKHDRPFLLSMANAGPGTNGSQFFVTTVPTPHLDGKHVVFGEVLSGKSVVRQIENLKT-QGDKP 167          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB1_RHIOR (Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 65/145 (44.83%), Postives = 86/145 (59.31%), Query Frame = 1
Query:   31 NLGDIKCEIACDEVPKTAENF--LALCASGY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            +LG I   +    VPKTAENF  LA   +GY Y G+ FHR IK FMIQ             SI+G +F DE    L+H+  G+LSMAN+G +TNGSQFFI+    P L+G + VFGRV+ G +V+  +E   TGS  +P  ++ I
Sbjct:   46 SLGRIVLGLYGKTVPKTAENFKQLATGENGYGYKGSTFHRVIKKFMIQGGDFTNHDGTGGKSIYGNRFADE-NFKLRHSTPGLLSMANAGRDTNGSQFFITTVVTPWLDGKHVVFGRVLEGMDVVTKIENTPTGSRSKPSVDVVI 189          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 7.872e-22
Identity = 62/142 (43.66%), Postives = 76/142 (53.52%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCASG----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGD 429
            G +  E+  D  P+TA NF ALC             +Y G+ FHR I GFM Q             SI+G KF DE    LKH   GILSMANSGPNTNGSQFFI   K   L+G + VFG+V+ G+ V+  ME   +  G+
Sbjct:   18 GRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDE-NFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGN 158          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_BLAGE (Peptidyl-prolyl cis-trans isomerase OS=Blattella germanica GN=CYPA PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.028e-21
Identity = 65/149 (43.62%), Postives = 86/149 (57.72%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEK--AQTGSGDRPLAEIRINRV 462
            +G I  E+  D VPKTAENF ALC    G+ Y G+ FHR I  FM Q             SI+G KF DE    LKH   GIL MAN+GPNTNGSQFFI+ AK   L+  + VFG V+ G +V+  +E   +Q+G  ++ +A +   ++
Sbjct:   17 VGRIVMELRSDVVPKTAENFRALCTGEKGFGYKGSRFHRVIPNFMCQGGDFTNHNGTGGKSIYGTKFEDE-NFQLKHTGPGILWMANAGPNTNGSQFFITTAKTSWLDNRHVVFGSVVEGMDVVKKLESLGSQSGKTNKKIAVVDCGQI 164          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA1_RHIOR (Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus oryzae GN=cyp2 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.028e-21
Identity = 68/145 (46.90%), Postives = 85/145 (58.62%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRIN 456
            LG I  E+  D VP+TAENF ALC    G+ Y G  FHR I  FM+Q             SI+G KF DE   +LKH   G LSMAN+GPNTNGSQFFI+  K   L+G + VFGRV  G +V+  +E   + +G  P A+I I+
Sbjct:   17 LGRIVMELRADVVPQTAENFRALCTGEKGFGYKGCSFHRVIPEFMLQGGDFTNHNGTGGKSIYGNKFRDE-NFTLKHTGPGDLSMANAGPNTNGSQFFITTIKCSWLDGKHVVFGRVTEGMDVVQNIESLGSPNG-TPRAKIIID 159          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.028e-21
Identity = 65/141 (46.10%), Postives = 82/141 (58.16%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA-------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            G I  E+  +EVPKTAENF ALC        SG   +Y G+ FHR I  FM Q             SI+G+KF DE +   K  A G+LSMAN+GPNTNGSQFFI     P L+G + VFG+V+ G +V+  +EK  T +G
Sbjct:   18 GRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDE-KFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGKHVVFGQVVEGMDVVKAIEKVGTRNG 157          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_YEAST (Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccharomyces cerevisiae GN=CPR6 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.343e-21
Identity = 65/154 (42.21%), Postives = 86/154 (55.84%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCASGY------------YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTG-SGDRPLAEIRIN 456
            G I  E+  D VPKTAENFL LC                Y G+IFHR IK FM Q             SI+ +KF DE   ++KH+   +LSMAN+GPNTNGSQ FI+    PHL+G + VFG VI G  ++ L+E  Q     ++PL +++I+
Sbjct:   18 GRIVFELYNDIVPKTAENFLKLCEGNAGMAKTKPDVPLSYKGSIFHRVIKDFMCQFGDFTNFNGTGGESIYDEKFEDE-NFTVKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIQGKRIVRLIENQQCDQENNKPLRDVKID 170          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIH_HUMAN (Peptidyl-prolyl cis-trans isomerase H OS=Homo sapiens GN=PPIH PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.754e-21
Identity = 62/151 (41.06%), Postives = 85/151 (56.29%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASGY--------YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINR 459
            +G +K E+  D VPKTAENF   C   +        Y G+ FHR IK FMIQ             SI+   F DE    L+H+A G+LSMANSGP+TNG QFFI+ +K   L+G + VFG++I G  V+  +E   TG  ++P   + I++
Sbjct:   24 VGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADE-NFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQ 173          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIH_BOVIN (Peptidyl-prolyl cis-trans isomerase H OS=Bos taurus GN=PPIH PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.754e-21
Identity = 62/151 (41.06%), Postives = 85/151 (56.29%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASGY--------YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINR 459
            +G +K E+  D VPKTAENF   C   +        Y G+ FHR IK FMIQ             SI+   F DE    L+H+A G+LSMANSGP+TNG QFFI+ +K   L+G + VFG++I G  V+  +E   TG  ++P   + I++
Sbjct:   24 VGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADE-NFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQ 173          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
CYPH_UROFA6.027e-2248.53Peptidyl-prolyl cis-trans isomerase OS=Uromyces fa... [more]
PPID_NEUCR7.872e-2245.1441 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]
PPIB1_RHIOR7.872e-2244.83Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus... [more]
CP19C_ARATH7.872e-2243.66Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Ara... [more]
PPIA_BLAGE1.028e-2143.62Peptidyl-prolyl cis-trans isomerase OS=Blattella g... [more]
PPIA1_RHIOR1.028e-2146.90Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus... [more]
CYPH_MAIZE1.028e-2146.10Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]
PPID_YEAST1.343e-2142.21Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccha... [more]
PPIH_HUMAN1.754e-2141.06Peptidyl-prolyl cis-trans isomerase H OS=Homo sapi... [more]
PPIH_BOVIN1.754e-2141.06Peptidyl-prolyl cis-trans isomerase H OS=Bos tauru... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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